RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	YER190C-B	P0CX94	160 aa		4.42	□□□□□ -1.7
APA1	YCL050C	YEL077W-A	P0CX95	160 aa		4.42	□□□□□ -1.7
APA1	YCL050C	YGR296C-B	P0CX96	160 aa		4.42	□□□□□ -1.7
APA1	YCL050C	YPL283W-B	P0CX97	160 aa		4.42	□□□□□ -1.7
APA1	YCL050C	YPR204C-A	P0CX98	160 aa		4.42	□□□□□ -1.7
APA1	YCL050C	LRE1	P25579	583 aa	Known RBP	4.42	□□□□□ -1.7
APA1	YCL050C	TOM71	P38825	639 aa	Known RBP	4.42	□□□□□ -1.7
APA1	YCL050C	YPT11	P48559	417 aa		4.42	□□□□□ -1.7
APA1	YCL050C	ADE16	P54113	591 aa	Known RBP	4.42	□□□□□ -1.7
APA1	YCL050C	YPL068C	Q02749	293 aa		4.42	□□□□□ -1.7
APA1	YCL050C	MCH4	Q08268	501 aa		4.42	□□□□□ -1.7
APA1	YCL050C	ATX2	Q12067	313 aa		4.42	□□□□□ -1.7
APA1	YCL050C	ATP2	P00830	511 aa	Known RBP	4.41	□□□□□ -1.7
APA1	YCL050C	PGI1	P12709	554 aa	Known RBP	4.41	□□□□□ -1.7
APA1	YCL050C	SPO16	P17122	198 aa		4.41	□□□□□ -1.7
APA1	YCL050C	YCR006C	P25350	157 aa		4.41	□□□□□ -1.7
APA1	YCL050C	OCT1	P35999	772 aa		4.41	□□□□□ -1.7
APA1	YCL050C	NPR3	P38742	1146 aa		4.41	□□□□□ -1.7
APA1	YCL050C	MDV1	P47025	714 aa		4.41	□□□□□ -1.7
APA1	YCL050C	IRC8	P47046	822 aa		4.41	□□□□□ -1.7
APA1	YCL050C	DCP2	P53550	970 aa	Known RBP	4.41	□□□□□ -1.7
APA1	YCL050C	RPL15B	P54780	204 aa	Predicted RBP	4.41	□□□□□ -1.7
APA1	YCL050C	MRPL13	Q02204	264 aa		4.41	□□□□□ -1.7
APA1	YCL050C	BLS1	Q06071	122 aa		4.41	□□□□□ -1.7
APA1	YCL050C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
APA1	YCL050C	YML003W	P0CF16	290 aa		4.4	□□□□□ -1.71
APA1	YCL050C	MRP2	P10663	115 aa	Predicted RBP	4.4	□□□□□ -1.71
APA1	YCL050C	APA1	P16550	321 aa	Known RBP	4.4	□□□□□ -1.71
APA1	YCL050C	NCP1	P16603	691 aa	Known RBP	4.4	□□□□□ -1.71
APA1	YCL050C	AIM17	P23180	465 aa	Known RBP	4.4	□□□□□ -1.71
APA1	YCL050C	RPT2	P40327	437 aa	Known RBP	4.4	□□□□□ -1.71
APA1	YCL050C	CDC1	P40986	491 aa		4.4	□□□□□ -1.71
APA1	YCL050C	UBP8	P50102	471 aa		4.4	□□□□□ -1.71
APA1	YCL050C	SWA2	Q06677	668 aa		4.4	□□□□□ -1.71
APA1	YCL050C	VAM6	Q07468	1049 aa		4.4	□□□□□ -1.71
APA1	YCL050C	YLR049C	Q12110	428 aa		4.4	□□□□□ -1.71
APA1	YCL050C	COX17	Q12287	69 aa		4.4	□□□□□ -1.71
APA1	YCL050C	TPK1	P06244	397 aa		4.39	□□□□□ -1.71
APA1	YCL050C	YCL049C	P25577	312 aa		4.39	□□□□□ -1.71
APA1	YCL050C	RAD16	P31244	790 aa		4.39	□□□□□ -1.71
APA1	YCL050C	PHM8	P40025	321 aa		4.39	□□□□□ -1.71
APA1	YCL050C	TPA1	P40032	644 aa	Known RBP	4.39	□□□□□ -1.71
APA1	YCL050C	VPS25	P47142	202 aa		4.39	□□□□□ -1.71
APA1	YCL050C	BOP3	P53958	396 aa		4.39	□□□□□ -1.71
APA1	YCL050C	CIR2	Q08822	631 aa		4.39	□□□□□ -1.71
APA1	YCL050C	YCP4	P25349	247 aa	Known RBP	4.38	□□□□□ -1.71
APA1	YCL050C	PTH2	P34222	208 aa		4.38	□□□□□ -1.71
APA1	YCL050C	UBX3	Q12229	455 aa		4.38	□□□□□ -1.71
APA1	YCL050C	EXO84	P38261	753 aa		4.37	□□□□□ -1.71
APA1	YCL050C	GND1	P38720	489 aa	Known RBP	4.37	□□□□□ -1.71
APA1	YCL050C	TPM2	P40414	161 aa		4.37	□□□□□ -1.71
APA1	YCL050C	SMK1	P41808	388 aa		4.37	□□□□□ -1.71
APA1	YCL050C	LYS20	P48570	428 aa	Known RBP	4.37	□□□□□ -1.71
APA1	YCL050C	ASE1	P50275	885 aa		4.37	□□□□□ -1.71
APA1	YCL050C	COG1	P53079	417 aa		4.37	□□□□□ -1.71
APA1	YCL050C	YGL036W	P53185	909 aa	Predicted RBP	4.37	□□□□□ -1.71
APA1	YCL050C	ARC35	P53731	342 aa	Known RBP	4.37	□□□□□ -1.71
APA1	YCL050C	PIG1	Q06216	648 aa		4.37	□□□□□ -1.71
APA1	YCL050C	SNA4	Q07549	140 aa		4.37	□□□□□ -1.71
APA1	YCL050C	PCT1	P13259	424 aa		4.36	□□□□□ -1.71
APA1	YCL050C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
APA1	YCL050C	DBF20	P32328	564 aa		4.36	□□□□□ -1.71
APA1	YCL050C	ATO2	P32907	282 aa		4.36	□□□□□ -1.71
APA1	YCL050C	LHS1	P36016	881 aa		4.36	□□□□□ -1.71
APA1	YCL050C	PXL1	P36166	706 aa		4.36	□□□□□ -1.71
APA1	YCL050C	SCS3	P53012	380 aa		4.36	□□□□□ -1.71
APA1	YCL050C	SWF1	Q04629	336 aa		4.36	□□□□□ -1.71
APA1	YCL050C	GSH2	Q08220	491 aa		4.36	□□□□□ -1.71
APA1	YCL050C	TY2A-LR1	P0C2J4	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-F	P0CX61	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-GR2	P0CX62	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	UBC1	P21734	215 aa	Known RBP	4.35	□□□□□ -1.71
APA1	YCL050C	YSP3	P25036	478 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-C	P25383	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	ADE17	P38009	592 aa	Known RBP	4.35	□□□□□ -1.71
APA1	YCL050C	UME6	P39001	836 aa		4.35	□□□□□ -1.71
APA1	YCL050C	MRX1	P40050	688 aa		4.35	□□□□□ -1.71
APA1	YCL050C	LSC1	P53598	329 aa	Known RBP	4.35	□□□□□ -1.71
APA1	YCL050C	FCP1	Q03254	732 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-DR2	Q03483	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	CIA1	Q05583	330 aa		4.35	□□□□□ -1.71
APA1	YCL050C	CRN1	Q06440	651 aa		4.35	□□□□□ -1.71
APA1	YCL050C	CSR1	Q06705	408 aa	Known RBP	4.35	□□□□□ -1.71
APA1	YCL050C	TMA16	Q08687	178 aa		4.35	□□□□□ -1.71
APA1	YCL050C	DSE3	Q08729	430 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-B	Q12260	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-OR2	Q12293	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-DR1	Q12392	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-OR1	Q12439	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	ERG27	Q12452	347 aa	Known RBP	4.35	□□□□□ -1.71
APA1	YCL050C	TY2A-DR3	Q99303	438 aa		4.35	□□□□□ -1.71
APA1	YCL050C	YER145C-A	A0A023PYF4	145 aa		4.34	□□□□□ -1.71
APA1	YCL050C	GPA1	P08539	472 aa		4.34	□□□□□ -1.71
APA1	YCL050C	MTF2	P10849	440 aa		4.34	□□□□□ -1.71
APA1	YCL050C	XRS2	P33301	854 aa		4.34	□□□□□ -1.71
APA1	YCL050C	SOF1	P33750	489 aa	Known RBP	4.34	□□□□□ -1.71
APA1	YCL050C	TFC3	P34111	1160 aa		4.34	□□□□□ -1.71
APA1	YCL050C	UBP13	P38187	747 aa		4.34	□□□□□ -1.71
APA1	YCL050C	IST3	P40565	148 aa	Predicted RBP	4.34	□□□□□ -1.71
APA1	YCL050C	CSL4	P53859	292 aa	Predicted RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms