RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C AEP1P32493 518 aa6.94□□□□□ -1.3
TDP1YBR223C PTH2P34222 208 aa6.94□□□□□ -1.3
TDP1YBR223C SLM4P38247 162 aa6.94□□□□□ -1.3
TDP1YBR223C YBR259WP38338 688 aa6.94□□□□□ -1.3
TDP1YBR223C GGA2P38817 585 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C HPM1P40481 377 aa6.94□□□□□ -1.3
TDP1YBR223C SIW14P53965 281 aa6.94□□□□□ -1.3
TDP1YBR223C MET14Q02196 202 aa6.94□□□□□ -1.3
TDP1YBR223C TRS31Q03337 283 aa6.94□□□□□ -1.3
TDP1YBR223C AIM32Q04689 311 aa6.94□□□□□ -1.3
TDP1YBR223C DYN3Q04949 312 aa6.94□□□□□ -1.3
TDP1YBR223C ATG17Q06410 417 aa6.94□□□□□ -1.3
TDP1YBR223C SYT1Q06836 1226 aa6.94□□□□□ -1.3
TDP1YBR223C MDM20Q12387 796 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C UBR2Q07963 1872 aa6.94□□□□□ -1.3
TDP1YBR223C STE2D6VTK4 431 aa6.94□□□□□ -1.3
TDP1YBR223C MIS1P09440 975 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C RGR1P19263 1082 aa6.94□□□□□ -1.3
TDP1YBR223C MOT2P34909 587 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C ARN1P38731 627 aa6.94□□□□□ -1.3
TDP1YBR223C PIK1P39104 1066 aa6.94□□□□□ -1.3
TDP1YBR223C EDC3P39998 551 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C ESL1P40456 1118 aa6.94□□□□□ -1.3
TDP1YBR223C YGL108CP53139 140 aa6.94□□□□□ -1.3
TDP1YBR223C YNL010WP53981 241 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C LSM3P57743 89 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C RSA3Q05942 220 aaKnown RBP6.94□□□□□ -1.3
TDP1YBR223C HDA3Q06623 655 aa6.94□□□□□ -1.3
TDP1YBR223C SWC7Q06707 132 aa6.94□□□□□ -1.3
TDP1YBR223C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
TDP1YBR223C COX5AP00424 153 aa6.93□□□□□ -1.3
TDP1YBR223C ART10P18634 518 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C YCR090CP25654 182 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C SPT16P32558 1035 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C PTC1P35182 281 aa6.93□□□□□ -1.3
TDP1YBR223C MRP21P38175 177 aa6.93□□□□□ -1.3
TDP1YBR223C UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C UTP9P38882 575 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C YJR061WP40355 935 aa6.93□□□□□ -1.3
TDP1YBR223C IAH1P41734 238 aa6.93□□□□□ -1.3
TDP1YBR223C VMA13P41807 478 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C NOP9P47077 666 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C TIM13P53299 105 aa6.93□□□□□ -1.3
TDP1YBR223C COP1P53622 1201 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C ARC35P53731 342 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C YNL115CP53925 644 aa6.93□□□□□ -1.3
TDP1YBR223C ADE12P80210 433 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C CDC14Q00684 551 aa6.93□□□□□ -1.3
TDP1YBR223C MTD1Q02046 320 aaKnown RBP6.93□□□□□ -1.3
TDP1YBR223C CRN1Q06440 651 aa6.93□□□□□ -1.3
TDP1YBR223C PMT7Q06644 662 aa6.93□□□□□ -1.3
TDP1YBR223C YPR097WQ06839 1073 aa6.93□□□□□ -1.3
TDP1YBR223C MDY2Q12285 212 aa6.93□□□□□ -1.3
TDP1YBR223C AFI1Q99222 893 aa6.93□□□□□ -1.3
TDP1YBR223C SPE1P08432 466 aa6.92□□□□□ -1.3
TDP1YBR223C ATR1P13090 542 aa6.92□□□□□ -1.3
TDP1YBR223C NSP1P14907 823 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C TYR1P20049 452 aa6.92□□□□□ -1.3
TDP1YBR223C BEM1P29366 551 aa6.92□□□□□ -1.3
TDP1YBR223C ATP7P30902 174 aa6.92□□□□□ -1.3
TDP1YBR223C YHR131CP38835 850 aa6.92□□□□□ -1.3
TDP1YBR223C TVP23P38962 199 aa6.92□□□□□ -1.3
TDP1YBR223C XDJ1P39102 459 aa6.92□□□□□ -1.3
TDP1YBR223C MPH1P40562 993 aa6.92□□□□□ -1.3
TDP1YBR223C FMP32P43557 207 aa6.92□□□□□ -1.3
TDP1YBR223C RSC8P43609 557 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C DCP2P53550 970 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C ASI2P53895 289 aa6.92□□□□□ -1.3
TDP1YBR223C SLM2P53955 656 aa6.92□□□□□ -1.3
TDP1YBR223C NAN1Q02931 896 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C RPN9Q04062 393 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C GLO2Q05584 274 aa6.92□□□□□ -1.3
TDP1YBR223C ESA1Q08649 445 aa6.92□□□□□ -1.3
TDP1YBR223C PKH2Q12236 1081 aaKnown RBP6.92□□□□□ -1.3
TDP1YBR223C NHA1Q99271 985 aa6.92□□□□□ -1.3
TDP1YBR223C ENO1P00924 437 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C HAP2P06774 265 aa6.91□□□□□ -1.3
TDP1YBR223C GLN4P13188 809 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C RPB4P20433 221 aaPredicted RBP6.91□□□□□ -1.3
TDP1YBR223C TRX2P22803 104 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C FUB1P25659 250 aa6.91□□□□□ -1.3
TDP1YBR223C FUI1P38196 639 aa6.91□□□□□ -1.3
TDP1YBR223C RIM11P38615 370 aa6.91□□□□□ -1.3
TDP1YBR223C URA8P38627 578 aaPredicted RBP6.91□□□□□ -1.3
TDP1YBR223C MNN1P39106 762 aa6.91□□□□□ -1.3
TDP1YBR223C YHB1P39676 399 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C NPT1P39683 429 aaKnown RBP6.91□□□□□ -1.3
TDP1YBR223C ELO3P40319 345 aa6.91□□□□□ -1.3
TDP1YBR223C ARH1P48360 493 aa6.91□□□□□ -1.3
TDP1YBR223C NOP19P53317 196 aaPredicted RBP6.91□□□□□ -1.3
TDP1YBR223C GND2P53319 492 aa6.91□□□□□ -1.3
TDP1YBR223C DOS2P54858 310 aa6.91□□□□□ -1.3
TDP1YBR223C RMI1Q02685 241 aa6.91□□□□□ -1.3
TDP1YBR223C SKI8Q02793 397 aaPredicted RBP6.91□□□□□ -1.3
TDP1YBR223C INP2Q03824 705 aa6.91□□□□□ -1.3
TDP1YBR223C PGC1Q08959 321 aa6.91□□□□□ -1.3
TDP1YBR223C SAM3Q08986 587 aa6.91□□□□□ -1.3
TDP1YBR223C NSL1Q12143 216 aa6.91□□□□□ -1.3
TDP1YBR223C UBX3Q12229 455 aa6.91□□□□□ -1.3
TDP1YBR223C SUT2Q12286 268 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms