RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W IRC10Q08118 586 aa5.32□□□□□ -1.56
CKS1YBR135W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
CKS1YBR135W LCB4Q12246 624 aa5.32□□□□□ -1.56
CKS1YBR135W PRS5Q12265 496 aaKnown RBP5.32□□□□□ -1.56
CKS1YBR135W RVB2Q12464 471 aaKnown RBP5.32□□□□□ -1.56
CKS1YBR135W Q0010Q9ZZX9 128 aa5.32□□□□□ -1.56
CKS1YBR135W STH1P32597 1359 aa5.31□□□□□ -1.56
CKS1YBR135W RPL7AP05737 244 aaKnown RBP5.31□□□□□ -1.56
CKS1YBR135W ERC1P38767 581 aa5.31□□□□□ -1.56
CKS1YBR135W ERP2P39704 215 aa5.31□□□□□ -1.56
CKS1YBR135W LAS21P40367 830 aa5.31□□□□□ -1.56
CKS1YBR135W ASE1P50275 885 aa5.31□□□□□ -1.56
CKS1YBR135W YGR079WP53249 370 aa5.31□□□□□ -1.56
CKS1YBR135W UBP16Q02863 499 aa5.31□□□□□ -1.56
CKS1YBR135W ATG23Q06671 453 aa5.31□□□□□ -1.56
CKS1YBR135W RPL7BQ12213 244 aaKnown RBP5.31□□□□□ -1.56
CKS1YBR135W SNQ2P32568 1501 aaKnown RBP5.31□□□□□ -1.56
CKS1YBR135W FUM1P08417 488 aaKnown RBP5.3□□□□□ -1.56
CKS1YBR135W YML003WP0CF16 290 aa5.3□□□□□ -1.56
CKS1YBR135W SPO16P17122 198 aa5.3□□□□□ -1.56
CKS1YBR135W PMA2P19657 947 aa5.3□□□□□ -1.56
CKS1YBR135W LRE1P25579 583 aaKnown RBP5.3□□□□□ -1.56
CKS1YBR135W MUD2P36084 527 aaKnown RBP5.3□□□□□ -1.56
CKS1YBR135W YIL161WP40449 235 aaKnown RBP5.3□□□□□ -1.56
CKS1YBR135W YFL015CP43578 164 aa5.3□□□□□ -1.56
CKS1YBR135W WAR1Q03631 944 aa5.3□□□□□ -1.56
CKS1YBR135W ARG7Q04728 441 aa5.3□□□□□ -1.56
CKS1YBR135W NUP170P38181 1502 aa5.29□□□□□ -1.56
CKS1YBR135W RPB2P08518 1224 aaKnown RBP5.29□□□□□ -1.56
CKS1YBR135W HSC82P15108 705 aaKnown RBP5.29□□□□□ -1.56
CKS1YBR135W RPA135P22138 1203 aaKnown RBP5.29□□□□□ -1.56
CKS1YBR135W IMP2'P32351 346 aa5.29□□□□□ -1.56
CKS1YBR135W PAH1P32567 862 aa5.29□□□□□ -1.56
CKS1YBR135W TDP1P38319 544 aa5.29□□□□□ -1.56
CKS1YBR135W MTG2P38860 518 aa5.29□□□□□ -1.56
CKS1YBR135W YEL020CP39994 560 aa5.29□□□□□ -1.56
CKS1YBR135W TMA108P40462 946 aa5.29□□□□□ -1.56
CKS1YBR135W VPS4P52917 437 aa5.29□□□□□ -1.56
CKS1YBR135W COG2P53271 262 aa5.29□□□□□ -1.56
CKS1YBR135W REG1Q00816 1014 aa5.29□□□□□ -1.56
CKS1YBR135W GIS1Q03833 894 aa5.29□□□□□ -1.56
CKS1YBR135W RCO1Q04779 684 aa5.29□□□□□ -1.56
CKS1YBR135W TMA16Q08687 178 aa5.29□□□□□ -1.56
CKS1YBR135W SWT1Q12104 458 aa5.29□□□□□ -1.56
CKS1YBR135W VCX1Q99385 411 aa5.29□□□□□ -1.56
CKS1YBR135W SNT2P53127 1403 aa5.29□□□□□ -1.56
CKS1YBR135W ULS1Q08562 1619 aa5.28□□□□□ -1.56
CKS1YBR135W YLR302CO13544 120 aa5.28□□□□□ -1.56
CKS1YBR135W RPN13O13563 156 aa5.28□□□□□ -1.56
CKS1YBR135W SAT4P25333 603 aaKnown RBP5.28□□□□□ -1.56
CKS1YBR135W RRP43P25359 394 aaPredicted RBP5.28□□□□□ -1.56
CKS1YBR135W MRPL9P31334 269 aa5.28□□□□□ -1.56
CKS1YBR135W MRP20P32387 263 aa5.28□□□□□ -1.56
CKS1YBR135W RPN12P32496 274 aa5.28□□□□□ -1.56
CKS1YBR135W SIP1P32578 815 aa5.28□□□□□ -1.56
CKS1YBR135W RPF2P36160 344 aaKnown RBP5.28□□□□□ -1.56
CKS1YBR135W PSD1P39006 500 aa5.28□□□□□ -1.56
CKS1YBR135W OPT1P40897 799 aa5.28□□□□□ -1.56
CKS1YBR135W NPA3P47122 385 aa5.28□□□□□ -1.56
CKS1YBR135W MRK1P50873 501 aa5.28□□□□□ -1.56
CKS1YBR135W RAD33Q04231 177 aa5.28□□□□□ -1.56
CKS1YBR135W YML053CQ04978 212 aa5.28□□□□□ -1.56
CKS1YBR135W SUT2Q12286 268 aa5.28□□□□□ -1.56
CKS1YBR135W SAN1P22470 610 aa5.27□□□□□ -1.57
CKS1YBR135W YJU2P28320 278 aaPredicted RBP5.27□□□□□ -1.57
CKS1YBR135W UGP1P32861 499 aaKnown RBP5.27□□□□□ -1.57
CKS1YBR135W HES1P35843 434 aa5.27□□□□□ -1.57
CKS1YBR135W SAP1P39955 897 aaKnown RBP5.27□□□□□ -1.57
CKS1YBR135W YEL068CP39977 110 aa5.27□□□□□ -1.57
CKS1YBR135W NOP16P40007 231 aaKnown RBP5.27□□□□□ -1.57
CKS1YBR135W FMP10P40098 244 aa5.27□□□□□ -1.57
CKS1YBR135W TDA10P42938 290 aa5.27□□□□□ -1.57
CKS1YBR135W QRI1P43123 477 aaKnown RBP5.27□□□□□ -1.57
CKS1YBR135W STU2P46675 888 aa5.27□□□□□ -1.57
CKS1YBR135W YKU80Q04437 629 aa5.27□□□□□ -1.57
CKS1YBR135W HRD3Q05787 833 aa5.27□□□□□ -1.57
CKS1YBR135W BAG7Q12128 409 aa5.27□□□□□ -1.57
CKS1YBR135W NBP2Q12163 236 aa5.27□□□□□ -1.57
CKS1YBR135W AHA1Q12449 350 aaKnown RBP5.27□□□□□ -1.57
CKS1YBR135W SPO14P36126 1683 aa5.27□□□□□ -1.57
CKS1YBR135W MLP2P40457 1679 aa5.27□□□□□ -1.57
CKS1YBR135W YMR084WA2P2R3 262 aa5.26□□□□□ -1.57
CKS1YBR135W COX1P00401 534 aa5.26□□□□□ -1.57
CKS1YBR135W CDC16P09798 840 aa5.26□□□□□ -1.57
CKS1YBR135W ERG8P24521 451 aa5.26□□□□□ -1.57
CKS1YBR135W FUN12P39730 1002 aaKnown RBP5.26□□□□□ -1.57
CKS1YBR135W YJR061WP40355 935 aa5.26□□□□□ -1.57
CKS1YBR135W YIL166CP40445 542 aa5.26□□□□□ -1.57
CKS1YBR135W DJP1P40564 432 aa5.26□□□□□ -1.57
CKS1YBR135W SIP4P46954 829 aa5.26□□□□□ -1.57
CKS1YBR135W UPF3P48412 387 aaKnown RBP5.26□□□□□ -1.57
CKS1YBR135W PLM2Q04383 521 aa5.26□□□□□ -1.57
CKS1YBR135W YPL191CQ08930 360 aa5.26□□□□□ -1.57
CKS1YBR135W ULA1Q12059 462 aa5.26□□□□□ -1.57
CKS1YBR135W ERG27Q12452 347 aaKnown RBP5.26□□□□□ -1.57
CKS1YBR135W AI5_ALPHAQ9ZZX1 630 aa5.26□□□□□ -1.57
CKS1YBR135W SEM1O94742 89 aa5.25□□□□□ -1.57
CKS1YBR135W SES1P07284 462 aaKnown RBP5.25□□□□□ -1.57
CKS1YBR135W AAC3P18238 307 aa5.25□□□□□ -1.57
CKS1YBR135W AAD3P25612 363 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 185 ms