RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W RRP6Q12149 733 aaKnown RBP5.94□□□□□ -1.46
SHP1YBL058W YBR056W-AI2HB52 66 aa5.93□□□□□ -1.46
SHP1YBL058W SCH9P11792 824 aaKnown RBP5.93□□□□□ -1.46
SHP1YBL058W DAT1P13483 248 aaKnown RBP5.93□□□□□ -1.46
SHP1YBL058W SEC23P15303 768 aaKnown RBP5.93□□□□□ -1.46
SHP1YBL058W RBK1P25332 333 aa5.93□□□□□ -1.46
SHP1YBL058W CWP1P28319 239 aa5.93□□□□□ -1.46
SHP1YBL058W MSR1P38714 643 aa5.93□□□□□ -1.46
SHP1YBL058W SIP4P46954 829 aa5.93□□□□□ -1.46
SHP1YBL058W CTK3P46963 296 aaPredicted RBP5.93□□□□□ -1.46
SHP1YBL058W SPC105P53148 917 aa5.93□□□□□ -1.46
SHP1YBL058W TEP1P53916 434 aa5.93□□□□□ -1.46
SHP1YBL058W YDR278CQ05612 105 aa5.93□□□□□ -1.46
SHP1YBL058W CMS1Q07897 291 aaKnown RBP5.93□□□□□ -1.46
SHP1YBL058W SKM1Q12469 655 aa5.93□□□□□ -1.46
SHP1YBL058W EFG1Q3E705 233 aaKnown RBP5.93□□□□□ -1.46
SHP1YBL058W COX5AP00424 153 aa5.92□□□□□ -1.46
SHP1YBL058W MOD5P07884 428 aa5.92□□□□□ -1.46
SHP1YBL058W SPO12P17123 173 aa5.92□□□□□ -1.46
SHP1YBL058W VAN1P23642 535 aa5.92□□□□□ -1.46
SHP1YBL058W YCR015CP25616 317 aa5.92□□□□□ -1.46
SHP1YBL058W MCM2P29469 868 aa5.92□□□□□ -1.46
SHP1YBL058W MRS6P32864 603 aaKnown RBP5.92□□□□□ -1.46
SHP1YBL058W MKS1P34072 584 aa5.92□□□□□ -1.46
SHP1YBL058W SCD5P34758 872 aa5.92□□□□□ -1.46
SHP1YBL058W LRP1P38801 184 aaKnown RBP5.92□□□□□ -1.46
SHP1YBL058W AIM18P38884 321 aa5.92□□□□□ -1.46
SHP1YBL058W MKT1P40850 830 aaKnown RBP5.92□□□□□ -1.46
SHP1YBL058W PCL10P53124 433 aa5.92□□□□□ -1.46
SHP1YBL058W YMR018WQ04364 514 aa5.92□□□□□ -1.46
SHP1YBL058W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
SHP1YBL058W PGC1Q08959 321 aa5.92□□□□□ -1.46
SHP1YBL058W NHA1Q99271 985 aa5.92□□□□□ -1.46
SHP1YBL058W SEY1Q99287 776 aa5.92□□□□□ -1.46
SHP1YBL058W FUR4P05316 633 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W TUB1P09733 447 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W GLN4P13188 809 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W RED1P14291 827 aa5.91□□□□□ -1.46
SHP1YBL058W MEI4P29467 408 aa5.91□□□□□ -1.46
SHP1YBL058W UTR2P32623 467 aa5.91□□□□□ -1.46
SHP1YBL058W PMC1P38929 1173 aaPredicted RBP5.91□□□□□ -1.46
SHP1YBL058W SMC2P38989 1170 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W YMR124WP39523 943 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W IST3P40565 148 aaPredicted RBP5.91□□□□□ -1.46
SHP1YBL058W TFG2P41896 400 aaPredicted RBP5.91□□□□□ -1.46
SHP1YBL058W NUP85P46673 744 aa5.91□□□□□ -1.46
SHP1YBL058W RTS3P53289 263 aa5.91□□□□□ -1.46
SHP1YBL058W NOG2P53742 486 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W YNL143CP53908 130 aa5.91□□□□□ -1.46
SHP1YBL058W VPS9P54787 451 aa5.91□□□□□ -1.46
SHP1YBL058W POB3Q04636 552 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W IVY1Q04934 453 aa5.91□□□□□ -1.46
SHP1YBL058W HBT1Q07653 1046 aaKnown RBP5.91□□□□□ -1.46
SHP1YBL058W TPO1Q07824 586 aa5.91□□□□□ -1.46
SHP1YBL058W YBL113CQ7M4S9 792 aa5.91□□□□□ -1.46
SHP1YBL058W TRA1P38811 3744 aa5.9□□□□□ -1.46
SHP1YBL058W GAL11P19659 1081 aa5.9□□□□□ -1.46
SHP1YBL058W PPH21P23594 369 aa5.9□□□□□ -1.46
SHP1YBL058W SRP72P38688 640 aaKnown RBP5.9□□□□□ -1.46
SHP1YBL058W OTU2P38747 307 aaKnown RBP5.9□□□□□ -1.46
SHP1YBL058W STN1P38960 494 aa5.9□□□□□ -1.46
SHP1YBL058W RPH1P39956 796 aa5.9□□□□□ -1.46
SHP1YBL058W ROK1P45818 564 aaPredicted RBP5.9□□□□□ -1.46
SHP1YBL058W BUD13P46947 266 aaPredicted RBP5.9□□□□□ -1.46
SHP1YBL058W RFX1P48743 811 aa5.9□□□□□ -1.46
SHP1YBL058W ROM1P53046 1155 aa5.9□□□□□ -1.46
SHP1YBL058W SWC4P53201 476 aa5.9□□□□□ -1.46
SHP1YBL058W RSM10Q03201 203 aa5.9□□□□□ -1.46
SHP1YBL058W ENT5Q03769 411 aaKnown RBP5.9□□□□□ -1.46
SHP1YBL058W ARG7Q04728 441 aa5.9□□□□□ -1.46
SHP1YBL058W HDA3Q06623 655 aa5.9□□□□□ -1.46
SHP1YBL058W VPS68Q12016 184 aa5.9□□□□□ -1.46
SHP1YBL058W RPP2BP02400 110 aaKnown RBP5.89□□□□□ -1.47
SHP1YBL058W PHO13P19881 312 aa5.89□□□□□ -1.47
SHP1YBL058W DBF4P32325 704 aa5.89□□□□□ -1.47
SHP1YBL058W TIM17P39515 158 aa5.89□□□□□ -1.47
SHP1YBL058W ELO3P40319 345 aa5.89□□□□□ -1.47
SHP1YBL058W ALR2P43553 858 aa5.89□□□□□ -1.47
SHP1YBL058W ALY2P47029 1046 aa5.89□□□□□ -1.47
SHP1YBL058W HXT16P47185 567 aa5.89□□□□□ -1.47
SHP1YBL058W HXT15P54854 567 aa5.89□□□□□ -1.47
SHP1YBL058W EGD1Q02642 157 aaKnown RBP5.89□□□□□ -1.47
SHP1YBL058W PNP1Q05788 311 aa5.89□□□□□ -1.47
SHP1YBL058W YOL073CQ08232 322 aa5.89□□□□□ -1.47
SHP1YBL058W TRM8Q12009 286 aa5.89□□□□□ -1.47
SHP1YBL058W SEC39Q12745 709 aa5.89□□□□□ -1.47
SHP1YBL058W YPR089WO13585 888 aa5.88□□□□□ -1.47
SHP1YBL058W SCL1P21243 252 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W UBA1P22515 1024 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W PTP1P25044 335 aa5.88□□□□□ -1.47
SHP1YBL058W PHO84P25297 587 aaKnown RBP5.88□□□□□ -1.47
SHP1YBL058W DCC1P25559 380 aa5.88□□□□□ -1.47
SHP1YBL058W MSP1P28737 362 aa5.88□□□□□ -1.47
SHP1YBL058W BEM1P29366 551 aa5.88□□□□□ -1.47
SHP1YBL058W SPR1P32603 445 aa5.88□□□□□ -1.47
SHP1YBL058W PHO11P35842 467 aa5.88□□□□□ -1.47
SHP1YBL058W TFA2P36145 328 aa5.88□□□□□ -1.47
SHP1YBL058W PCA1P38360 1216 aa5.88□□□□□ -1.47
SHP1YBL058W HIS2P38635 335 aa5.88□□□□□ -1.47
SHP1YBL058W PHO12P38693 467 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms