RNA–Protein interactions for RNA: YPR185W

ATG13, Transcript of Regulatory subunit of the Atg1p signaling complex, yeast

Gene ATG13, Length 2,217 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG13	YPR185W	TOS1	P38288	455 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	SEO1	P39709	593 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	FRT2	P39734	528 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	SAH1	P39954	449 aa	Known RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	YJL055W	P47044	245 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	MRK1	P50873	501 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	CIK1	Q01649	594 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	NAN1	Q02931	896 aa	Known RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	CLU1	Q03690	1277 aa	Known RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	TVP15	Q03860	143 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	PRM6	Q04705	352 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	DIB1	Q06819	143 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	SGO1	Q08490	590 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	TMA46	Q12000	345 aa	Known RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	ATG11	Q12527	1178 aa		2.99	□□□□□ -1.93
ATG13	YPR185W	HTZ1	Q12692	134 aa	Known RBP	2.99	□□□□□ -1.93
ATG13	YPR185W	SWI6	P09959	803 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	SNF4	P12904	322 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	CAF20	P12962	161 aa	Known RBP	2.98	□□□□□ -1.93
ATG13	YPR185W	SNT1	P25357	1226 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	PTP2	P29461	750 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
ATG13	YPR185W	SPR1	P32603	445 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	ABD1	P32783	436 aa	Predicted RBP	2.98	□□□□□ -1.93
ATG13	YPR185W	UGA4	P32837	571 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	TAT1	P38085	619 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	APM2	P38700	605 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	VMA22	P38784	181 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	PES4	P39684	611 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	AVT6	P40074	448 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	PEP8	P40335	379 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	ARG2	P40360	574 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	TMA108	P40462	946 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	LEM3	P42838	414 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	TAH11	P47112	604 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	BIR1	P47134	954 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	ATP22	P50273	684 aa	Predicted RBP	2.98	□□□□□ -1.93
ATG13	YPR185W	YML6	P51998	286 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	RPA49	Q01080	415 aa	Predicted RBP	2.98	□□□□□ -1.93
ATG13	YPR185W	SWP1	Q02795	286 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	SND1	Q04007	877 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	COA4	Q05809	96 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	TSR2	Q06672	205 aa	Known RBP	2.98	□□□□□ -1.93
ATG13	YPR185W	RCN2	Q12044	265 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	PSF3	Q12146	194 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	ARP6	Q12509	438 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	NHA1	Q99271	985 aa		2.98	□□□□□ -1.93
ATG13	YPR185W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
ATG13	YPR185W	SRD1	P09007	221 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	GCN3	P14741	305 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	POL30	P15873	258 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	STF2	P16965	84 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	RPB10	P22139	70 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	UBA1	P22515	1024 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	HBS1	P32769	611 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	YSC83	P32792	385 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	SPC42	P36094	363 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	NTR2	P36118	322 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	YBR138C	P38277	524 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	SSZ1	P38788	538 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	VPS45	P38932	577 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	PET100	P38958	111 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	IES5	P40060	125 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	TMN3	P40071	706 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	UBP7	P40453	1071 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	HPM1	P40481	377 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	VHR1	P40522	640 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	AIM21	P40563	679 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	IRC5	P43610	853 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	PRY1	P47032	299 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	ZAP1	P47043	880 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	YJR054W	P47114	497 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	EMC2	P47133	292 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	TRF5	P48561	642 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	RCF2	P53721	224 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	YNR040W	P53736	256 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	SKI8	Q02793	397 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	YMR099C	Q03161	297 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	OYE2	Q03558	400 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	YML108W	Q03759	105 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	IVY1	Q04934	453 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	GLO2	Q05584	274 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	KAP95	Q06142	861 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	CDA1	Q06702	301 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	MCA1	Q08601	432 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	BUD7	Q08754	746 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	UIP4	Q08926	304 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	HRT3	Q12347	344 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	RRP36	Q12481	300 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	RHO1	P06780	209 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	IMA3	P0CW40	589 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	IMA4	P0CW41	589 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	HMG2	P12684	1045 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	CCR4	P31384	837 aa	Known RBP	2.97	□□□□□ -1.93
ATG13	YPR185W	GYP6	P32806	458 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	CLG1	P35190	452 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	YBR139W	P38109	508 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	GIP1	P38229	639 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	APE4	P38821	490 aa		2.97	□□□□□ -1.93
ATG13	YPR185W	PIK1	P39104	1066 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms