RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	KSP1	P38691	1029 aa	Known RBP	4.21	□□□□□ -1.74
HSH49	YOR319W	PAC2	P39937	518 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	ARB1	P40024	610 aa	Known RBP	4.21	□□□□□ -1.74
HSH49	YOR319W	YJR061W	P40355	935 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	ARC1	P46672	376 aa	Known RBP	4.21	□□□□□ -1.74
HSH49	YOR319W	TAM41	P53230	385 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.74
HSH49	YOR319W	EFR3	Q03653	782 aa	Known RBP	4.21	□□□□□ -1.74
HSH49	YOR319W	RCO1	Q04779	684 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	THI7	Q05998	598 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	ICT1	Q12385	394 aa		4.21	□□□□□ -1.74
HSH49	YOR319W	RPB2	P08518	1224 aa	Known RBP	4.2	□□□□□ -1.74
HSH49	YOR319W	MET8	P15807	274 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	SPO16	P17122	198 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	MRP20	P32387	263 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	APL3	P38065	1025 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	SDH8	P38345	138 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	YHR097C	P38809	366 aa	Known RBP	4.2	□□□□□ -1.74
HSH49	YOR319W	LYS14	P40971	790 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	IRC6	P43615	237 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	SIP4	P46954	829 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	SGM1	P47166	707 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	ASE1	P50275	885 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	MRK1	P50873	501 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	VPS4	P52917	437 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	MDG1	P53885	366 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	BMS1	Q08965	1183 aa	Known RBP	4.2	□□□□□ -1.74
HSH49	YOR319W	SCM3	Q12334	223 aa		4.2	□□□□□ -1.74
HSH49	YOR319W	RVB2	Q12464	471 aa	Known RBP	4.2	□□□□□ -1.74
HSH49	YOR319W	ATP2	P00830	511 aa	Known RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	RPL19A	P0CX82	189 aa	Known RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	RPL19B	P0CX83	189 aa	Predicted RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	CDC24	P11433	854 aa	Predicted RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	SGF29	P25554	259 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	YIL161W	P40449	235 aa	Known RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	VTC2	P43585	828 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	NMA2	P53204	395 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	TIM10	P87108	93 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	MTG1	Q03151	367 aa	Predicted RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	USA1	Q03714	838 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	CRF1	Q04930	467 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	SLK19	Q08581	821 aa	Known RBP	4.19	□□□□□ -1.74
HSH49	YOR319W	YOR111W	Q99210	232 aa		4.19	□□□□□ -1.74
HSH49	YOR319W	OLE1	P21147	510 aa	Known RBP	4.18	□□□□□ -1.74
HSH49	YOR319W	PDE1	P22434	369 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	PGS1	P25578	521 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	ORC2	P32833	620 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	ELF1	P36053	145 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	SNF12	P53628	566 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	MRPL19	P53875	158 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	DAK1	P54838	584 aa	Known RBP	4.18	□□□□□ -1.74
HSH49	YOR319W	REG1	Q00816	1014 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	MFM1	Q02783	413 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	FCP1	Q03254	732 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	UFO1	Q04511	668 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	MRI1	Q06489	411 aa	Known RBP	4.18	□□□□□ -1.74
HSH49	YOR319W	NUS1	Q12063	375 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	TAH18	Q12181	623 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	RKI1	Q12189	258 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	ERG27	Q12452	347 aa	Known RBP	4.18	□□□□□ -1.74
HSH49	YOR319W	YBR255C-A	Q3E776	120 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	PNO1	Q99216	274 aa	Known RBP	4.18	□□□□□ -1.74
HSH49	YOR319W	VCX1	Q99385	411 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
HSH49	YOR319W	GCN4	P03069	281 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	STE12	P13574	688 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	HOM2	P13663	365 aa	Known RBP	4.17	□□□□□ -1.74
HSH49	YOR319W	PRE8	P23639	250 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	URK1	P27515	501 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	LOT5	P34234	306 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	CCL1	P37366	393 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	YMC2	P38087	329 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	LNP1	P38878	278 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	UTP9	P38882	575 aa	Known RBP	4.17	□□□□□ -1.74
HSH49	YOR319W	FMP10	P40098	244 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	THI6	P41835	540 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	DUO1	P53168	247 aa	Known RBP	4.17	□□□□□ -1.74
HSH49	YOR319W	RPS15	Q01855	142 aa	Known RBP	4.17	□□□□□ -1.74
HSH49	YOR319W	YSA1	Q01976	231 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	TAF11	Q04226	346 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	GTB1	Q04924	702 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	ATG23	Q06671	453 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	YPL216W	Q08964	1102 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	HUA2	Q12134	243 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	YER175W-A	Q8TGU4	54 aa		4.17	□□□□□ -1.74
HSH49	YOR319W	LRE1	P25579	583 aa	Known RBP	4.16	□□□□□ -1.74
HSH49	YOR319W	TMT1	P32643	299 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	ESL2	P36168	1195 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	YBR225W	P38321	900 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	BUD16	P39988	312 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	UBP7	P40453	1071 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	AAD10	P47182	288 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	YIP4	P53093	235 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	DIP5	P53388	608 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	BUD17	P53727	317 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	MFB1	Q04922	465 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	YLR287C	Q05881	355 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	TMA16	Q08687	178 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	TGS1	Q12052	315 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms