RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C URE2P23202 354 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C CNA1P23287 553 aa7.53□□□□□ -1.2
RUP1YOR138C PKC1P24583 1151 aa7.53□□□□□ -1.2
RUP1YOR138C YUR1P26725 428 aa7.53□□□□□ -1.2
RUP1YOR138C CDC3P32457 520 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C RTG2P32608 588 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C AIM26P32858 118 aa7.53□□□□□ -1.2
RUP1YOR138C TIF3P34167 436 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C PTC1P35182 281 aa7.53□□□□□ -1.2
RUP1YOR138C YKR015CP36111 568 aa7.53□□□□□ -1.2
RUP1YOR138C BIT2P38346 545 aa7.53□□□□□ -1.2
RUP1YOR138C UBP7P40453 1071 aa7.53□□□□□ -1.2
RUP1YOR138C IML2P47031 731 aa7.53□□□□□ -1.2
RUP1YOR138C CCT8P47079 568 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C ASN2P49090 572 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C INP2Q03824 705 aa7.53□□□□□ -1.2
RUP1YOR138C DYN3Q04949 312 aa7.53□□□□□ -1.2
RUP1YOR138C EFG1Q3E705 233 aaKnown RBP7.53□□□□□ -1.2
RUP1YOR138C YLR278CQ05854 1341 aa7.52□□□□□ -1.2
RUP1YOR138C NDI1P32340 513 aa7.52□□□□□ -1.2
RUP1YOR138C NGG1P32494 702 aa7.52□□□□□ -1.2
RUP1YOR138C FLR1P38124 548 aa7.52□□□□□ -1.2
RUP1YOR138C FIR1P40020 876 aa7.52□□□□□ -1.2
RUP1YOR138C SNL1P40548 159 aa7.52□□□□□ -1.2
RUP1YOR138C VMA13P41807 478 aaKnown RBP7.52□□□□□ -1.2
RUP1YOR138C SHE4P51534 789 aa7.52□□□□□ -1.2
RUP1YOR138C BUD32P53323 261 aa7.52□□□□□ -1.2
RUP1YOR138C ALG11P53954 548 aaKnown RBP7.52□□□□□ -1.2
RUP1YOR138C SKY1Q03656 742 aa7.52□□□□□ -1.2
RUP1YOR138C YDR179W-AQ03983 463 aa7.52□□□□□ -1.2
RUP1YOR138C JIP5Q06214 492 aaPredicted RBP7.52□□□□□ -1.2
RUP1YOR138C VIK1Q12045 647 aa7.52□□□□□ -1.2
RUP1YOR138C IOC2Q12072 812 aa7.52□□□□□ -1.2
RUP1YOR138C IES3Q12345 250 aa7.52□□□□□ -1.2
RUP1YOR138C SPE1P08432 466 aa7.52□□□□□ -1.21
RUP1YOR138C MAS2P11914 482 aa7.52□□□□□ -1.21
RUP1YOR138C HSP60P19882 572 aaKnown RBP7.52□□□□□ -1.21
RUP1YOR138C MSH2P25847 964 aa7.52□□□□□ -1.21
RUP1YOR138C RIM1P32445 135 aaKnown RBP7.52□□□□□ -1.21
RUP1YOR138C KAR9P32526 644 aa7.52□□□□□ -1.21
RUP1YOR138C PCS60P38137 543 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
RUP1YOR138C SRP68P38687 599 aaKnown RBP7.52□□□□□ -1.21
RUP1YOR138C PPE1P38796 400 aa7.52□□□□□ -1.21
RUP1YOR138C MEF2P39677 819 aa7.52□□□□□ -1.21
RUP1YOR138C YAT2P40017 923 aa7.52□□□□□ -1.21
RUP1YOR138C MNN11P46985 422 aaKnown RBP7.52□□□□□ -1.21
RUP1YOR138C STB4P50104 949 aa7.52□□□□□ -1.21
RUP1YOR138C AIF1P52923 378 aa7.52□□□□□ -1.21
RUP1YOR138C SCS3P53012 380 aa7.52□□□□□ -1.21
RUP1YOR138C YMR226CQ05016 267 aaKnown RBP7.52□□□□□ -1.21
RUP1YOR138C CIR2Q08822 631 aa7.52□□□□□ -1.21
RUP1YOR138C MSH5Q12175 901 aa7.52□□□□□ -1.21
RUP1YOR138C PTH2P34222 208 aa7.51□□□□□ -1.21
RUP1YOR138C MRPL7P36519 292 aa7.51□□□□□ -1.21
RUP1YOR138C AMN1P38285 549 aaPredicted RBP7.51□□□□□ -1.21
RUP1YOR138C TDP1P38319 544 aa7.51□□□□□ -1.21
RUP1YOR138C YHI9P38765 294 aa7.51□□□□□ -1.21
RUP1YOR138C ATM1P40416 690 aa7.51□□□□□ -1.21
RUP1YOR138C AZR1P50080 613 aa7.51□□□□□ -1.21
RUP1YOR138C VPS9P54787 451 aa7.51□□□□□ -1.21
RUP1YOR138C HPT1Q04178 221 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C RSC2Q06488 889 aa7.51□□□□□ -1.21
RUP1YOR138C HSH49Q99181 213 aaPredicted RBP7.51□□□□□ -1.21
RUP1YOR138C MSS116P15424 664 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C ART10P18634 518 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C AMD2P22580 549 aa7.51□□□□□ -1.21
RUP1YOR138C PMI40P29952 429 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C RME1P32338 300 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C UGP1P32861 499 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C INP51P40559 946 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C NET1P47035 1189 aa7.51□□□□□ -1.21
RUP1YOR138C MRK1P50873 501 aa7.51□□□□□ -1.21
RUP1YOR138C GET1P53192 235 aa7.51□□□□□ -1.21
RUP1YOR138C YNL010WP53981 241 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C ASI1P54074 624 aa7.51□□□□□ -1.21
RUP1YOR138C GLO2Q05584 274 aa7.51□□□□□ -1.21
RUP1YOR138C SEC10Q06245 871 aa7.51□□□□□ -1.21
RUP1YOR138C SPE3Q12074 293 aaKnown RBP7.51□□□□□ -1.21
RUP1YOR138C CTF3Q12748 733 aa7.51□□□□□ -1.21
RUP1YOR138C PRT1P06103 763 aaKnown RBP7.5□□□□□ -1.21
RUP1YOR138C HSP26P15992 214 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
RUP1YOR138C AEP1P32493 518 aa7.5□□□□□ -1.21
RUP1YOR138C RIB7P33312 244 aa7.5□□□□□ -1.21
RUP1YOR138C PEX6P33760 1030 aa7.5□□□□□ -1.21
RUP1YOR138C YBR259WP38338 688 aa7.5□□□□□ -1.21
RUP1YOR138C YHR182WP38870 785 aa7.5□□□□□ -1.21
RUP1YOR138C EMC2P47133 292 aaKnown RBP7.5□□□□□ -1.21
RUP1YOR138C RBL2P48606 106 aaKnown RBP7.5□□□□□ -1.21
RUP1YOR138C NCS6P53088 359 aa7.5□□□□□ -1.21
RUP1YOR138C GPI1P53306 609 aa7.5□□□□□ -1.21
RUP1YOR138C ARC35P53731 342 aaKnown RBP7.5□□□□□ -1.21
RUP1YOR138C SLG1P54867 378 aa7.5□□□□□ -1.21
RUP1YOR138C CWC15Q03772 175 aaKnown RBP7.5□□□□□ -1.21
RUP1YOR138C ARP9Q05123 467 aa7.5□□□□□ -1.21
RUP1YOR138C SLD7Q08457 257 aa7.5□□□□□ -1.21
RUP1YOR138C PSY3Q12318 242 aa7.5□□□□□ -1.21
RUP1YOR138C NHA1Q99271 985 aa7.5□□□□□ -1.21
RUP1YOR138C ECM29P38737 1868 aa7.5□□□□□ -1.21
RUP1YOR138C SNF4P12904 322 aa7.49□□□□□ -1.21
RUP1YOR138C CLB2P24869 491 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms