RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C PCL7P40186 285 aa2.41□□□□□ -2.02
AFI1YOR129C LRO1P40345 661 aa2.41□□□□□ -2.02
AFI1YOR129C PAN2P53010 1115 aaPredicted RBP2.41□□□□□ -2.02
AFI1YOR129C EFM5P53200 248 aaKnown RBP2.41□□□□□ -2.02
AFI1YOR129C DLT1Q04216 342 aa2.41□□□□□ -2.02
AFI1YOR129C SNO4Q04902 237 aa2.41□□□□□ -2.02
AFI1YOR129C IRC13Q08630 104 aa2.41□□□□□ -2.02
AFI1YOR129C HSP33Q08914 237 aaKnown RBP2.41□□□□□ -2.02
AFI1YOR129C HSP32Q08992 237 aa2.41□□□□□ -2.02
AFI1YOR129C ENT1Q12518 454 aa2.41□□□□□ -2.02
AFI1YOR129C BIK1P11709 440 aa2.4□□□□□ -2.02
AFI1YOR129C CAF20P12962 161 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C VPS33P20795 691 aa2.4□□□□□ -2.02
AFI1YOR129C PRE10P21242 288 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
AFI1YOR129C TOD6P34219 525 aa2.4□□□□□ -2.02
AFI1YOR129C YBL028CP38202 106 aa2.4□□□□□ -2.02
AFI1YOR129C NOP16P40007 231 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C KHA1P40309 873 aa2.4□□□□□ -2.02
AFI1YOR129C ELO3P40319 345 aa2.4□□□□□ -2.02
AFI1YOR129C CAB2P40506 365 aa2.4□□□□□ -2.02
AFI1YOR129C BST1P43571 1029 aa2.4□□□□□ -2.02
AFI1YOR129C FYV8P46949 817 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C RAD17P48581 401 aa2.4□□□□□ -2.02
AFI1YOR129C PSP1P50896 841 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C YGR054WP53235 642 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C ALF1P53904 254 aa2.4□□□□□ -2.02
AFI1YOR129C VPS64Q03944 604 aa2.4□□□□□ -2.02
AFI1YOR129C ARA2Q04212 335 aa2.4□□□□□ -2.02
AFI1YOR129C SMD2Q06217 110 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C MDM36Q06820 579 aa2.4□□□□□ -2.02
AFI1YOR129C CHS5Q12114 671 aaKnown RBP2.4□□□□□ -2.02
AFI1YOR129C COX17Q12287 69 aa2.4□□□□□ -2.02
AFI1YOR129C KSS1P14681 368 aa2.4□□□□□ -2.03
AFI1YOR129C MET8P15807 274 aa2.4□□□□□ -2.03
AFI1YOR129C THR4P16120 514 aaKnown RBP2.4□□□□□ -2.03
AFI1YOR129C COY1P34237 679 aa2.4□□□□□ -2.03
AFI1YOR129C MIC60P36112 540 aa2.4□□□□□ -2.03
AFI1YOR129C SDS3P40505 327 aa2.4□□□□□ -2.03
AFI1YOR129C YJL163CP46996 555 aa2.4□□□□□ -2.03
AFI1YOR129C MPS3P47069 682 aa2.4□□□□□ -2.03
AFI1YOR129C MCM6P53091 1017 aaKnown RBP2.4□□□□□ -2.03
AFI1YOR129C MNP1P53163 194 aaPredicted RBP2.4□□□□□ -2.03
AFI1YOR129C SEC5P89102 971 aa2.4□□□□□ -2.03
AFI1YOR129C YLR287CQ05881 355 aa2.4□□□□□ -2.03
AFI1YOR129C ADE13Q05911 482 aaKnown RBP2.4□□□□□ -2.03
AFI1YOR129C MLH2Q07980 695 aa2.4□□□□□ -2.03
AFI1YOR129C APL4Q12028 832 aa2.4□□□□□ -2.03
AFI1YOR129C SMF3Q12078 473 aaPredicted RBP2.4□□□□□ -2.03
AFI1YOR129C MLH3Q12083 715 aa2.4□□□□□ -2.03
AFI1YOR129C LSP1Q12230 341 aaKnown RBP2.4□□□□□ -2.03
AFI1YOR129C ZRT2Q12436 422 aa2.4□□□□□ -2.03
AFI1YOR129C SSK22P25390 1331 aaPredicted RBP2.39□□□□□ -2.03
AFI1YOR129C FUM1P08417 488 aaKnown RBP2.39□□□□□ -2.03
AFI1YOR129C PRP6P19735 899 aaPredicted RBP2.39□□□□□ -2.03
AFI1YOR129C PRP28P23394 588 aa2.39□□□□□ -2.03
AFI1YOR129C RPN2P32565 945 aaKnown RBP2.39□□□□□ -2.03
AFI1YOR129C THI80P35202 319 aa2.39□□□□□ -2.03
AFI1YOR129C PHO11P35842 467 aa2.39□□□□□ -2.03
AFI1YOR129C PHO12P38693 467 aa2.39□□□□□ -2.03
AFI1YOR129C FSH1P38777 243 aaKnown RBP2.39□□□□□ -2.03
AFI1YOR129C YJL193WP39542 402 aa2.39□□□□□ -2.03
AFI1YOR129C YEL025CP39991 1188 aa2.39□□□□□ -2.03
AFI1YOR129C RIC1P40395 1056 aa2.39□□□□□ -2.03
AFI1YOR129C SAP4P53036 818 aa2.39□□□□□ -2.03
AFI1YOR129C RIM8P53179 542 aa2.39□□□□□ -2.03
AFI1YOR129C TAM41P53230 385 aa2.39□□□□□ -2.03
AFI1YOR129C YAP1802P53309 568 aa2.39□□□□□ -2.03
AFI1YOR129C NRD1P53617 575 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
AFI1YOR129C GIM3P53900 129 aa2.39□□□□□ -2.03
AFI1YOR129C REX2P54964 269 aaKnown RBP2.39□□□□□ -2.03
AFI1YOR129C ATG21Q02887 496 aa2.39□□□□□ -2.03
AFI1YOR129C YKU80Q04437 629 aa2.39□□□□□ -2.03
AFI1YOR129C HOF1Q05080 669 aa2.39□□□□□ -2.03
AFI1YOR129C YOR389WQ08912 624 aa2.39□□□□□ -2.03
AFI1YOR129C BRR1Q99177 341 aaPredicted RBP2.39□□□□□ -2.03
AFI1YOR129C CDC16P09798 840 aa2.39□□□□□ -2.03
AFI1YOR129C SPO16P17122 198 aa2.39□□□□□ -2.03
AFI1YOR129C RAD16P31244 790 aa2.39□□□□□ -2.03
AFI1YOR129C DPH2P32461 534 aa2.39□□□□□ -2.03
AFI1YOR129C RPT3P33298 428 aaKnown RBP2.39□□□□□ -2.03
AFI1YOR129C FTH1P38310 465 aa2.39□□□□□ -2.03
AFI1YOR129C CTM1P38818 585 aa2.39□□□□□ -2.03
AFI1YOR129C UME6P39001 836 aa2.39□□□□□ -2.03
AFI1YOR129C FMP10P40098 244 aa2.39□□□□□ -2.03
AFI1YOR129C PIG2P40187 538 aa2.39□□□□□ -2.03
AFI1YOR129C AGX1P43567 385 aa2.39□□□□□ -2.03
AFI1YOR129C SIP4P46954 829 aa2.39□□□□□ -2.03
AFI1YOR129C NUP84P52891 726 aa2.39□□□□□ -2.03
AFI1YOR129C FHN1P53279 174 aa2.39□□□□□ -2.03
AFI1YOR129C RRN5Q02983 363 aa2.39□□□□□ -2.03
AFI1YOR129C IZH3Q07959 543 aa2.39□□□□□ -2.03
AFI1YOR129C YKL033W-AQ86ZR7 236 aa2.39□□□□□ -2.03
AFI1YOR129C HSH49Q99181 213 aaPredicted RBP2.39□□□□□ -2.03
AFI1YOR129C SIR3P06701 978 aa2.38□□□□□ -2.03
AFI1YOR129C MET3P08536 511 aa2.38□□□□□ -2.03
AFI1YOR129C SEC12P11655 471 aa2.38□□□□□ -2.03
AFI1YOR129C DBF4P32325 704 aa2.38□□□□□ -2.03
AFI1YOR129C SSE1P32589 693 aaKnown RBP2.38□□□□□ -2.03
AFI1YOR129C DSS4P32601 143 aa2.38□□□□□ -2.03
AFI1YOR129C TEF4P36008 412 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms