RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W PAT1P25644 796 aaKnown RBP7.54□□□□□ -1.2
PRE5YMR314W MNN11P46985 422 aaKnown RBP7.54□□□□□ -1.2
PRE5YMR314W UBX6P47049 396 aa7.54□□□□□ -1.2
PRE5YMR314W PMT3P47190 753 aa7.54□□□□□ -1.2
PRE5YMR314W YGL108CP53139 140 aa7.54□□□□□ -1.2
PRE5YMR314W CDA2Q06703 312 aa7.54□□□□□ -1.2
PRE5YMR314W PLB3Q08108 686 aa7.54□□□□□ -1.2
PRE5YMR314W GUP2Q08929 609 aa7.54□□□□□ -1.2
PRE5YMR314W GAL11P19659 1081 aa7.53□□□□□ -1.2
PRE5YMR314W RNQ1P25367 405 aa7.53□□□□□ -1.2
PRE5YMR314W IRS4P36115 615 aaKnown RBP7.53□□□□□ -1.2
PRE5YMR314W ERP2P39704 215 aa7.53□□□□□ -1.2
PRE5YMR314W SPG5P42933 373 aa7.53□□□□□ -1.2
PRE5YMR314W YFR018CP43599 363 aa7.53□□□□□ -1.2
PRE5YMR314W BIR1P47134 954 aa7.53□□□□□ -1.2
PRE5YMR314W TRF5P48561 642 aaKnown RBP7.53□□□□□ -1.2
PRE5YMR314W HST1P53685 503 aa7.53□□□□□ -1.2
PRE5YMR314W YMR160WQ03823 816 aa7.53□□□□□ -1.2
PRE5YMR314W ERV41Q04651 352 aa7.53□□□□□ -1.2
PRE5YMR314W SWC7Q06707 132 aa7.53□□□□□ -1.2
PRE5YMR314W YPL272CQ08984 517 aa7.53□□□□□ -1.2
PRE5YMR314W CWC2Q12046 339 aaPredicted RBP7.53□□□□□ -1.2
PRE5YMR314W GLE1Q12315 538 aa7.53□□□□□ -1.2
PRE5YMR314W UBA1P22515 1024 aaKnown RBP7.52□□□□□ -1.21
PRE5YMR314W RRN6P32786 894 aa7.52□□□□□ -1.21
PRE5YMR314W SCD5P34758 872 aa7.52□□□□□ -1.21
PRE5YMR314W STN1P38960 494 aa7.52□□□□□ -1.21
PRE5YMR314W RPH1P39956 796 aa7.52□□□□□ -1.21
PRE5YMR314W PTC2P39966 464 aaKnown RBP7.52□□□□□ -1.21
PRE5YMR314W IST3P40565 148 aaPredicted RBP7.52□□□□□ -1.21
PRE5YMR314W HXT8P40886 569 aa7.52□□□□□ -1.21
PRE5YMR314W NRD1P53617 575 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
PRE5YMR314W YNL040WP53960 456 aaPredicted RBP7.52□□□□□ -1.21
PRE5YMR314W TRS23Q03784 219 aa7.52□□□□□ -1.21
PRE5YMR314W UFO1Q04511 668 aa7.52□□□□□ -1.21
PRE5YMR314W YDR222WQ04925 415 aa7.52□□□□□ -1.21
PRE5YMR314W ENT2Q05785 613 aa7.52□□□□□ -1.21
PRE5YMR314W PGC1Q08959 321 aa7.52□□□□□ -1.21
PRE5YMR314W TRM8Q12009 286 aa7.52□□□□□ -1.21
PRE5YMR314W MSL5Q12186 476 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
PRE5YMR314W YPL066WQ12194 479 aa7.52□□□□□ -1.21
PRE5YMR314W YDR262WQ12331 272 aa7.52□□□□□ -1.21
PRE5YMR314W OCA6Q12454 224 aa7.52□□□□□ -1.21
PRE5YMR314W YET1P35723 206 aa7.51□□□□□ -1.21
PRE5YMR314W ARA1P38115 344 aa7.51□□□□□ -1.21
PRE5YMR314W IML3P38265 245 aa7.51□□□□□ -1.21
PRE5YMR314W BDH2P39713 417 aa7.51□□□□□ -1.21
PRE5YMR314W TMN3P40071 706 aa7.51□□□□□ -1.21
PRE5YMR314W SLX8P40072 274 aa7.51□□□□□ -1.21
PRE5YMR314W YMR1P47147 688 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
PRE5YMR314W YGR111WP53265 400 aa7.51□□□□□ -1.21
PRE5YMR314W YNL247WP53852 767 aaKnown RBP7.51□□□□□ -1.21
PRE5YMR314W CDC55Q00362 526 aa7.51□□□□□ -1.21
PRE5YMR314W SIZ1Q04195 904 aa7.51□□□□□ -1.21
PRE5YMR314W RRP6Q12149 733 aaKnown RBP7.51□□□□□ -1.21
PRE5YMR314W EFG1Q3E705 233 aaKnown RBP7.51□□□□□ -1.21
PRE5YMR314W IZH4Q99393 312 aa7.51□□□□□ -1.21
PRE5YMR314W TUB3P09734 445 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W PDC5P16467 563 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W RBK1P25332 333 aa7.5□□□□□ -1.21
PRE5YMR314W RFA2P26754 273 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W NTH1P32356 751 aa7.5□□□□□ -1.21
PRE5YMR314W LYP1P32487 611 aa7.5□□□□□ -1.21
PRE5YMR314W RIM101P33400 625 aa7.5□□□□□ -1.21
PRE5YMR314W BIT2P38346 545 aa7.5□□□□□ -1.21
PRE5YMR314W MIP6P38760 659 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W ALK1P43633 760 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W ETT1Q08421 412 aaKnown RBP7.5□□□□□ -1.21
PRE5YMR314W NHA1Q99271 985 aa7.5□□□□□ -1.21
PRE5YMR314W SEY1Q99287 776 aa7.5□□□□□ -1.21
PRE5YMR314W CLC1P17891 233 aa7.49□□□□□ -1.21
PRE5YMR314W EPT1P22140 391 aa7.49□□□□□ -1.21
PRE5YMR314W TRX1P22217 103 aaKnown RBP7.49□□□□□ -1.21
PRE5YMR314W MVD1P32377 396 aaKnown RBP7.49□□□□□ -1.21
PRE5YMR314W CDC13P32797 924 aaKnown RBP7.49□□□□□ -1.21
PRE5YMR314W MPE1P35728 441 aaKnown RBP7.49□□□□□ -1.21
PRE5YMR314W AIM18P38884 321 aa7.49□□□□□ -1.21
PRE5YMR314W TIM17P39515 158 aa7.49□□□□□ -1.21
PRE5YMR314W SSU1P41930 458 aa7.49□□□□□ -1.21
PRE5YMR314W RRT5P43607 289 aa7.49□□□□□ -1.21
PRE5YMR314W BUD13P46947 266 aaPredicted RBP7.49□□□□□ -1.21
PRE5YMR314W VPS9P54787 451 aa7.49□□□□□ -1.21
PRE5YMR314W ELP4Q02884 456 aaKnown RBP7.49□□□□□ -1.21
PRE5YMR314W CIA1Q05583 330 aa7.49□□□□□ -1.21
PRE5YMR314W TGL5Q12043 749 aa7.49□□□□□ -1.21
PRE5YMR314W CYR1P08678 2026 aaKnown RBP7.48□□□□□ -1.21
PRE5YMR314W YCR006CP25350 157 aa7.48□□□□□ -1.21
PRE5YMR314W GSY2P27472 705 aa7.48□□□□□ -1.21
PRE5YMR314W SPT16P32558 1035 aaKnown RBP7.48□□□□□ -1.21
PRE5YMR314W MRPL37P36532 105 aa7.48□□□□□ -1.21
PRE5YMR314W MTG2P38860 518 aa7.48□□□□□ -1.21
PRE5YMR314W MVP1P40959 511 aaKnown RBP7.48□□□□□ -1.21
PRE5YMR314W ROK1P45818 564 aaPredicted RBP7.48□□□□□ -1.21
PRE5YMR314W TAD1P53065 400 aa7.48□□□□□ -1.21
PRE5YMR314W STR3P53101 465 aaKnown RBP7.48□□□□□ -1.21
PRE5YMR314W ENT5Q03769 411 aaKnown RBP7.48□□□□□ -1.21
PRE5YMR314W TPO1Q07824 586 aa7.48□□□□□ -1.21
PRE5YMR314W TMS1Q12116 473 aa7.48□□□□□ -1.21
PRE5YMR314W FRT1Q99332 602 aa7.48□□□□□ -1.21
PRE5YMR314W COX5AP00424 153 aa7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms