RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	SPC105	P53148	917 aa		12.19	□□□□□ -0.46
DSK2	YMR276W	NMA111	P53920	997 aa		12.19	□□□□□ -0.46
DSK2	YMR276W	REG1	Q00816	1014 aa		12.19	□□□□□ -0.46
DSK2	YMR276W	MSH6	Q03834	1242 aa		12.19	□□□□□ -0.46
DSK2	YMR276W	SAM4	Q08985	325 aa	Known RBP	12.19	□□□□□ -0.46
DSK2	YMR276W	PIN2	Q12057	282 aa		12.19	□□□□□ -0.46
DSK2	YMR276W	PET123	P17558	318 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	RBK1	P25332	333 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	RGD2	P43556	714 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	RIM8	P53179	542 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	CWC22	P53333	577 aa	Known RBP	12.18	□□□□□ -0.46
DSK2	YMR276W	MTG1	Q03151	367 aa	Predicted RBP	12.18	□□□□□ -0.46
DSK2	YMR276W	PPN1	Q04119	674 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	SML1	Q04964	104 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	ARP9	Q05123	467 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	YDL129W	Q07555	291 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	AIM41	Q12032	185 aa		12.18	□□□□□ -0.46
DSK2	YMR276W	PFS1	P38872	237 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	TIF34	P40217	347 aa	Known RBP	12.17	□□□□□ -0.46
DSK2	YMR276W	BUD13	P46947	266 aa	Predicted RBP	12.17	□□□□□ -0.46
DSK2	YMR276W	MNN10	P50108	393 aa	Known RBP	12.17	□□□□□ -0.46
DSK2	YMR276W	TEP1	P53916	434 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	VAC7	P53950	1165 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	CDC14	Q00684	551 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	POB3	Q04636	552 aa	Known RBP	12.17	□□□□□ -0.46
DSK2	YMR276W	Q0182	Q9ZZW1	134 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	UBR1	P19812	1950 aa		12.17	□□□□□ -0.46
DSK2	YMR276W	YKL151C	P36059	337 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	TFA2	P36145	328 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	GND2	P53319	492 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	SIW14	P53965	281 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	RSC4	Q02206	625 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	TDA9	Q04545	1251 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	NAG1	Q8TGN9	163 aa		12.16	□□□□□ -0.46
DSK2	YMR276W	COX3	P00420	269 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	POL30	P15873	258 aa	Known RBP	12.15	□□□□□ -0.46
DSK2	YMR276W	BRF1	P29056	596 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	PAP1	P29468	568 aa	Known RBP	12.15	□□□□□ -0.46
DSK2	YMR276W	UTR2	P32623	467 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	SLX5	P32828	619 aa	Known RBP	12.15	□□□□□ -0.46
DSK2	YMR276W	SCD5	P34758	872 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	TAE1	P38340	232 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	MSG5	P38590	489 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	MMS21	P38632	267 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	MSR1	P38714	643 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	IML2	P47031	731 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	MET14	Q02196	202 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	RLI1	Q03195	608 aa	Known RBP	12.15	□□□□□ -0.46
DSK2	YMR276W	GNT1	Q12096	491 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	YOR338W	Q99326	363 aa		12.15	□□□□□ -0.46
DSK2	YMR276W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	12.14	□□□□□ -0.47	not detected
DSK2	YMR276W	DCC1	P25559	380 aa		12.14	□□□□□ -0.47
DSK2	YMR276W	LRP1	P38801	184 aa	Known RBP	12.14	□□□□□ -0.47
DSK2	YMR276W	CSN12	P47130	423 aa		12.14	□□□□□ -0.47
DSK2	YMR276W	YPR003C	P53394	754 aa		12.14	□□□□□ -0.47
DSK2	YMR276W	YPL113C	Q02961	396 aa		12.14	□□□□□ -0.47
DSK2	YMR276W	AVL9	Q12500	764 aa		12.14	□□□□□ -0.47
DSK2	YMR276W	CLN1	P20437	546 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	12.13	□□□□□ -0.47	not detected
DSK2	YMR276W	AEP1	P32493	518 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	YBP1	P38315	674 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	SMF1	P38925	575 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	YJL070C	P40361	888 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	NDC80	P40460	691 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	SNO2	P53823	222 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	ECI1	Q05871	280 aa		12.13	□□□□□ -0.47
DSK2	YMR276W	NUM1	Q00402	2748 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	CDC24	P11433	854 aa	Predicted RBP	12.12	□□□□□ -0.47
DSK2	YMR276W	SPT15	P13393	240 aa	Known RBP	12.12	□□□□□ -0.47
DSK2	YMR276W	EMC1	P25574	760 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	PMI40	P29952	429 aa	Known RBP	12.12	□□□□□ -0.47
DSK2	YMR276W	SLD2	P34252	453 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	DSN1	P40568	576 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	SET2	P46995	733 aa	Known RBP	12.12	□□□□□ -0.47
DSK2	YMR276W	NBP35	P52920	328 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	MTO1	P53070	669 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	YNL143C	P53908	130 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	ATG10	Q07879	167 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	HOS1	Q12214	470 aa		12.12	□□□□□ -0.47
DSK2	YMR276W	SUC2	P00724	532 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	MPH2	P0CD99	609 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	NDI1	P32340	513 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	HEM12	P32347	362 aa	Predicted RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	GCD6	P32501	712 aa	Known RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	IRS4	P36115	615 aa	Known RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	UTH1	P36135	365 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	FAA3	P39002	694 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	RPL34B	P40525	121 aa	Known RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	SAP4	P53036	818 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	COG1	P53079	417 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	PCL10	P53124	433 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	YMR160W	Q03823	816 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	YDR131C	Q03899	556 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	URH1	Q04179	340 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	GSF2	Q04697	403 aa	Known RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	RPN8	Q08723	338 aa	Known RBP	12.11	□□□□□ -0.47
DSK2	YMR276W	MCM16	Q12262	181 aa		12.11	□□□□□ -0.47
DSK2	YMR276W	YSP3	P25036	478 aa		12.1	□□□□□ -0.47
DSK2	YMR276W	KES1	P35844	434 aa	Known RBP	12.1	□□□□□ -0.47
DSK2	YMR276W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	12.1	□□□□□ -0.47	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms