RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W PDE1P22434 369 aa3.13□□□□□ -1.91
DDR48YMR173W CNA1P23287 553 aa3.13□□□□□ -1.91
DDR48YMR173W GSH1P32477 678 aa3.13□□□□□ -1.91
DDR48YMR173W ARN1P38731 627 aa3.13□□□□□ -1.91
DDR48YMR173W UBP7P40453 1071 aa3.13□□□□□ -1.91
DDR48YMR173W IMA5P40884 581 aa3.13□□□□□ -1.91
DDR48YMR173W ORC5P50874 479 aa3.13□□□□□ -1.91
DDR48YMR173W PEX14P53112 341 aa3.13□□□□□ -1.91
DDR48YMR173W VPS64Q03944 604 aa3.13□□□□□ -1.91
DDR48YMR173W CRF1Q04930 467 aa3.13□□□□□ -1.91
DDR48YMR173W SNA4Q07549 140 aa3.13□□□□□ -1.91
DDR48YMR173W ADH4P10127 382 aa3.12□□□□□ -1.91
DDR48YMR173W PTC6P25646 442 aa3.12□□□□□ -1.91
DDR48YMR173W FRD1P32614 470 aaKnown RBP3.12□□□□□ -1.91
DDR48YMR173W TFC4P33339 1025 aa3.12□□□□□ -1.91
DDR48YMR173W SWD1P39706 426 aa3.12□□□□□ -1.91
DDR48YMR173W SAW1P39735 261 aa3.12□□□□□ -1.91
DDR48YMR173W PHM8P40025 321 aa3.12□□□□□ -1.91
DDR48YMR173W YIR016WP40572 265 aa3.12□□□□□ -1.91
DDR48YMR173W CDC1P40986 491 aa3.12□□□□□ -1.91
DDR48YMR173W EAF7P53911 425 aaKnown RBP3.12□□□□□ -1.91
DDR48YMR173W BOP3P53958 396 aa3.12□□□□□ -1.91
DDR48YMR173W ACS1Q01574 713 aa3.12□□□□□ -1.91
DDR48YMR173W YOR389WQ08912 624 aa3.12□□□□□ -1.91
DDR48YMR173W LEA1Q08963 238 aaPredicted RBP3.12□□□□□ -1.91
DDR48YMR173W RPS7AP26786 190 aaKnown RBP3.11□□□□□ -1.91
DDR48YMR173W SWC3P31376 625 aa3.11□□□□□ -1.91
DDR48YMR173W GND1P38720 489 aaKnown RBP3.11□□□□□ -1.91
DDR48YMR173W ESF2P53743 316 aaKnown RBP3.11□□□□□ -1.91
DDR48YMR173W MLH2Q07980 695 aa3.11□□□□□ -1.91
DDR48YMR173W PFA4Q12006 378 aa3.11□□□□□ -1.91
DDR48YMR173W NUR1Q12066 484 aa3.11□□□□□ -1.91
DDR48YMR173W ARP7Q12406 477 aa3.11□□□□□ -1.91
DDR48YMR173W RRI1Q12468 440 aa3.11□□□□□ -1.91
DDR48YMR173W SEC18P18759 758 aaKnown RBP3.1□□□□□ -1.91
DDR48YMR173W HES1P35843 434 aa3.1□□□□□ -1.91
DDR48YMR173W GTB1Q04924 702 aa3.1□□□□□ -1.91
DDR48YMR173W THI3Q07471 609 aa3.1□□□□□ -1.91
DDR48YMR173W DSE3Q08729 430 aa3.1□□□□□ -1.91
DDR48YMR173W ILV2P07342 687 aaKnown RBP3.09□□□□□ -1.91
DDR48YMR173W YFL068WP0CX99 160 aa3.09□□□□□ -1.91
DDR48YMR173W YLL066W-AP0CY00 160 aa3.09□□□□□ -1.91
DDR48YMR173W YLL067W-AP0CY01 160 aa3.09□□□□□ -1.91
DDR48YMR173W BIK1P11709 440 aa3.09□□□□□ -1.91
DDR48YMR173W SIP1P32578 815 aa3.09□□□□□ -1.91
DDR48YMR173W OCT1P35999 772 aa3.09□□□□□ -1.91
DDR48YMR173W SCO2P38072 301 aa3.09□□□□□ -1.91
DDR48YMR173W NPA3P47122 385 aa3.09□□□□□ -1.91
DDR48YMR173W ASK10P48361 1146 aa3.09□□□□□ -1.91
DDR48YMR173W YNL034WP53963 612 aa3.09□□□□□ -1.91
DDR48YMR173W CEG1Q01159 459 aaPredicted RBP3.09□□□□□ -1.91
DDR48YMR173W YLR281CQ05863 155 aa3.09□□□□□ -1.91
DDR48YMR173W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
DDR48YMR173W PHO2P07269 559 aa3.08□□□□□ -1.92
DDR48YMR173W MCM3P24279 971 aaKnown RBP3.08□□□□□ -1.92
DDR48YMR173W YCR043CP25361 127 aa3.08□□□□□ -1.92
DDR48YMR173W LAC1P28496 418 aa3.08□□□□□ -1.92
DDR48YMR173W ARC40P38328 384 aaKnown RBP3.08□□□□□ -1.92
DDR48YMR173W VPS41P38959 992 aa3.08□□□□□ -1.92
DDR48YMR173W PCL6P40038 420 aa3.08□□□□□ -1.92
DDR48YMR173W TES1P41903 349 aaKnown RBP3.08□□□□□ -1.92
DDR48YMR173W YPT11P48559 417 aa3.08□□□□□ -1.92
DDR48YMR173W CAC2Q04199 468 aa3.08□□□□□ -1.92
DDR48YMR173W EIS1Q05050 843 aaKnown RBP3.08□□□□□ -1.92
DDR48YMR173W PIG1Q06216 648 aa3.08□□□□□ -1.92
DDR48YMR173W GRS2Q06817 618 aa3.08□□□□□ -1.92
DDR48YMR173W SIR1P21691 654 aa3.07□□□□□ -1.92
DDR48YMR173W NIC96P34077 839 aa3.07□□□□□ -1.92
DDR48YMR173W PDR8Q06149 701 aa3.07□□□□□ -1.92
DDR48YMR173W GSH2Q08220 491 aa3.07□□□□□ -1.92
DDR48YMR173W BAG7Q12128 409 aa3.07□□□□□ -1.92
DDR48YMR173W MSS51P32335 436 aa3.06□□□□□ -1.92
DDR48YMR173W RTT107P38850 1070 aa3.06□□□□□ -1.92
DDR48YMR173W STT3P39007 718 aaKnown RBP3.06□□□□□ -1.92
DDR48YMR173W BUD16P39988 312 aa3.06□□□□□ -1.92
DDR48YMR173W YPR003CP53394 754 aa3.06□□□□□ -1.92
DDR48YMR173W YPL108WQ02872 168 aaPredicted RBP3.06□□□□□ -1.92
DDR48YMR173W SWF1Q04629 336 aa3.06□□□□□ -1.92
DDR48YMR173W ECM22Q05958 814 aaPredicted RBP3.06□□□□□ -1.92
DDR48YMR173W SSB1P11484 613 aaKnown RBP3.05□□□□□ -1.92
DDR48YMR173W URK1P27515 501 aa3.05□□□□□ -1.92
DDR48YMR173W DED81P38707 554 aaKnown RBP3.05□□□□□ -1.92
DDR48YMR173W SSB2P40150 613 aaKnown RBP3.05□□□□□ -1.92
DDR48YMR173W MSY1P48527 492 aa3.05□□□□□ -1.92
DDR48YMR173W IMA1P53051 589 aa3.05□□□□□ -1.92
DDR48YMR173W YGR079WP53249 370 aa3.05□□□□□ -1.92
DDR48YMR173W YNL144CP53907 740 aa3.05□□□□□ -1.92
DDR48YMR173W TGL2P54857 326 aa3.05□□□□□ -1.92
DDR48YMR173W ATG23Q06671 453 aa3.05□□□□□ -1.92
DDR48YMR173W MCH4Q08268 501 aa3.05□□□□□ -1.92
DDR48YMR173W COX1P00401 534 aa3.04□□□□□ -1.92
DDR48YMR173W RKM3P38222 552 aa3.04□□□□□ -1.92
DDR48YMR173W MET30P39014 640 aa3.04□□□□□ -1.92
DDR48YMR173W FUN12P39730 1002 aaKnown RBP3.04□□□□□ -1.92
DDR48YMR173W CAB2P40506 365 aa3.04□□□□□ -1.92
DDR48YMR173W MAD3P47074 515 aa3.04□□□□□ -1.92
DDR48YMR173W UBP8P50102 471 aa3.04□□□□□ -1.92
DDR48YMR173W FOL1P53848 824 aa3.04□□□□□ -1.92
DDR48YMR173W BET4Q00618 327 aa3.04□□□□□ -1.92
DDR48YMR173W YMR034CQ05131 434 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms