RNA–Protein interactions for RNA: YML010W

SPT5, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeast

Gene SPT5, Length 3,192 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT5	YML010W	UTR4	P32626	227 aa		13.19	□□□□□ -0.3
SPT5	YML010W	MDJ1	P35191	511 aa		13.19	□□□□□ -0.3
SPT5	YML010W	YRB2	P40517	327 aa		13.19	□□□□□ -0.3
SPT5	YML010W	GPI17	Q04080	534 aa		13.19	□□□□□ -0.3
SPT5	YML010W	FMP42	Q04991	504 aa		13.19	□□□□□ -0.3
SPT5	YML010W	SUB2	Q07478	446 aa	Known RBP	13.19	□□□□□ -0.3
SPT5	YML010W	THI21	Q08975	551 aa		13.19	□□□□□ -0.3
SPT5	YML010W	HSC82	P15108	705 aa	Known RBP	13.18	□□□□□ -0.3
SPT5	YML010W	SEC15	P22224	910 aa		13.18	□□□□□ -0.3
SPT5	YML010W	TYE7	P33122	291 aa	Predicted RBP	13.18	□□□□□ -0.3
SPT5	YML010W	AVT6	P40074	448 aa		13.18	□□□□□ -0.3
SPT5	YML010W	CCT7	P42943	550 aa	Known RBP	13.18	□□□□□ -0.3
SPT5	YML010W	GPI1	P53306	609 aa		13.18	□□□□□ -0.3
SPT5	YML010W	VPS9	P54787	451 aa		13.18	□□□□□ -0.3
SPT5	YML010W	PLP1	Q04004	230 aa		13.18	□□□□□ -0.3
SPT5	YML010W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	13.18	□□□□□ -0.3	not detected
SPT5	YML010W	BRR1	Q99177	341 aa	Predicted RBP	13.18	□□□□□ -0.3
SPT5	YML010W	SPB1	P25582	841 aa	Predicted RBP	13.18	□□□□□ -0.3
SPT5	YML010W	AIF1	P52923	378 aa		13.18	□□□□□ -0.3
SPT5	YML010W	MON1	P53129	644 aa		13.18	□□□□□ -0.3
SPT5	YML010W	BUD32	P53323	261 aa		13.18	□□□□□ -0.3
SPT5	YML010W	VPS5	Q92331	675 aa		13.18	□□□□□ -0.3
SPT5	YML010W	THR1	P17423	357 aa	Known RBP	13.18	□□□□□ -0.3
SPT5	YML010W	ART10	P18634	518 aa	Known RBP	13.18	□□□□□ -0.3
SPT5	YML010W	AIM26	P32858	118 aa		13.18	□□□□□ -0.3
SPT5	YML010W	PTH2	P34222	208 aa		13.18	□□□□□ -0.3
SPT5	YML010W	SWP82	P43554	623 aa		13.18	□□□□□ -0.3
SPT5	YML010W	YGR283C	P53336	341 aa	Predicted RBP	13.18	□□□□□ -0.3
SPT5	YML010W	TPO1	Q07824	586 aa		13.18	□□□□□ -0.3
SPT5	YML010W	APM4	Q99186	491 aa		13.18	□□□□□ -0.3
SPT5	YML010W	IZH4	Q99393	312 aa		13.18	□□□□□ -0.3
SPT5	YML010W	MOT1	P32333	1867 aa		13.17	□□□□□ -0.3
SPT5	YML010W	SAC1	P32368	623 aa	Known RBP	13.17	□□□□□ -0.3
SPT5	YML010W	TY1B-A	O13527	1196 aa	Known RBP	13.17	□□□□□ -0.3
SPT5	YML010W	PRR1	P28708	518 aa		13.17	□□□□□ -0.3
SPT5	YML010W	GCD11	P32481	527 aa	Known RBP	13.17	□□□□□ -0.3
SPT5	YML010W	MEF2	P39677	819 aa		13.17	□□□□□ -0.3
SPT5	YML010W	IMD4	P50094	524 aa	Known RBP	13.17	□□□□□ -0.3
SPT5	YML010W	YLL054C	Q12244	843 aa		13.17	□□□□□ -0.3
SPT5	YML010W	IDI1	P15496	288 aa		13.16	□□□□□ -0.3
SPT5	YML010W	YKR023W	P36119	530 aa	Known RBP	13.16	□□□□□ -0.3
SPT5	YML010W	OTU2	P38747	307 aa	Known RBP	13.16	□□□□□ -0.3
SPT5	YML010W	SEO1	P39709	593 aa		13.16	□□□□□ -0.3
SPT5	YML010W	PCD1	Q12524	340 aa		13.16	□□□□□ -0.3
SPT5	YML010W	STB4	P50104	949 aa		13.16	□□□□□ -0.3
SPT5	YML010W	YMR099C	Q03161	297 aa	Known RBP	13.16	□□□□□ -0.3
SPT5	YML010W	DIS3	Q08162	1001 aa	Known RBP	13.16	□□□□□ -0.3
SPT5	YML010W	ULA1	Q12059	462 aa		13.16	□□□□□ -0.3
SPT5	YML010W	VPS54	Q12071	889 aa		13.16	□□□□□ -0.3
SPT5	YML010W	ERG20	P08524	352 aa	Known RBP	13.16	□□□□□ -0.3
SPT5	YML010W	MSM1	P22438	575 aa		13.16	□□□□□ -0.3
SPT5	YML010W	CTR86	P25355	563 aa		13.16	□□□□□ -0.3
SPT5	YML010W	BUD23	P25627	275 aa	Predicted RBP	13.16	□□□□□ -0.3
SPT5	YML010W	ABZ1	P37254	787 aa	Predicted RBP	13.16	□□□□□ -0.3
SPT5	YML010W	MMS4	P38257	691 aa		13.16	□□□□□ -0.3
SPT5	YML010W	RRT5	P43607	289 aa		13.16	□□□□□ -0.3
SPT5	YML010W	YCS4	Q06156	1176 aa		13.16	□□□□□ -0.3
SPT5	YML010W	YEH2	Q07950	538 aa		13.16	□□□□□ -0.3
SPT5	YML010W	HSH49	Q99181	213 aa	Predicted RBP	13.16	□□□□□ -0.3
SPT5	YML010W	COX6	P00427	148 aa		13.15	□□□□□ -0.3
SPT5	YML010W	CAD1	P24813	409 aa	Known RBP	13.15	□□□□□ -0.3
SPT5	YML010W	VBA3	P25594	458 aa		13.15	□□□□□ -0.3
SPT5	YML010W	VBA5	P36172	582 aa		13.15	□□□□□ -0.3
SPT5	YML010W	PEX29	Q03370	554 aa		13.15	□□□□□ -0.3
SPT5	YML010W	SLD5	Q03406	294 aa		13.15	□□□□□ -0.3
SPT5	YML010W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	13.15	□□□□□ -0.3	not detected
SPT5	YML010W	TKL1	P23254	680 aa	Known RBP	13.15	□□□□□ -0.3
SPT5	YML010W	VMA22	P38784	181 aa		13.15	□□□□□ -0.3
SPT5	YML010W	GEM1	P39722	662 aa		13.15	□□□□□ -0.3
SPT5	YML010W	ALT1	P52893	592 aa		13.15	□□□□□ -0.3
SPT5	YML010W	YNL115C	P53925	644 aa		13.15	□□□□□ -0.3
SPT5	YML010W	HEM1	P09950	548 aa	Predicted RBP	13.14	□□□□□ -0.31
SPT5	YML010W	PHO81	P17442	1178 aa		13.14	□□□□□ -0.31
SPT5	YML010W	DAL1	P32375	460 aa		13.14	□□□□□ -0.31
SPT5	YML010W	HSL7	P38274	827 aa		13.14	□□□□□ -0.31
SPT5	YML010W	MNP1	P53163	194 aa	Predicted RBP	13.14	□□□□□ -0.31
SPT5	YML010W	ARE2	P53629	642 aa	Known RBP	13.14	□□□□□ -0.31
SPT5	YML010W	YNL010W	P53981	241 aa	Known RBP	13.14	□□□□□ -0.31
SPT5	YML010W	ESA1	Q08649	445 aa		13.14	□□□□□ -0.31
SPT5	YML010W	MUM3	Q08750	479 aa		13.14	□□□□□ -0.31
SPT5	YML010W	NHA1	Q99271	985 aa		13.14	□□□□□ -0.31
SPT5	YML010W	PMA2	P19657	947 aa		13.14	□□□□□ -0.31
SPT5	YML010W	AEP1	P32493	518 aa		13.14	□□□□□ -0.31
SPT5	YML010W	YPQ2	Q06328	317 aa		13.14	□□□□□ -0.31
SPT5	YML010W	NOP12	Q08208	459 aa	Known RBP	13.14	□□□□□ -0.31
SPT5	YML010W	YBR139W	P38109	508 aa		13.14	□□□□□ -0.31
SPT5	YML010W	SSZ1	P38788	538 aa	Known RBP	13.14	□□□□□ -0.31
SPT5	YML010W	NCS6	P53088	359 aa		13.14	□□□□□ -0.31
SPT5	YML010W	NOP19	P53317	196 aa	Predicted RBP	13.14	□□□□□ -0.31
SPT5	YML010W	YPR003C	P53394	754 aa		13.14	□□□□□ -0.31
SPT5	YML010W	CWC15	Q03772	175 aa	Known RBP	13.14	□□□□□ -0.31
SPT5	YML010W	ARP9	Q05123	467 aa		13.14	□□□□□ -0.31
SPT5	YML010W	CDC123	Q05791	360 aa		13.14	□□□□□ -0.31
SPT5	YML010W	JIP5	Q06214	492 aa	Predicted RBP	13.14	□□□□□ -0.31
SPT5	YML010W	GYP1	Q08484	637 aa		13.14	□□□□□ -0.31
SPT5	YML010W	ERP3	Q12403	225 aa		13.14	□□□□□ -0.31
SPT5	YML010W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
SPT5	YML010W	ULI1	P43604	169 aa		13.13	□□□□□ -0.31
SPT5	YML010W	RPS7B	P48164	190 aa	Known RBP	13.13	□□□□□ -0.31
SPT5	YML010W	DTD1	Q07648	150 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 195.5 ms