RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C NOP9P47077 666 aaKnown RBP12.21□□□□□ -0.45
SDH1YKL148C YGL108CP53139 140 aa12.21□□□□□ -0.45
SDH1YKL148C ASI2P53895 289 aa12.21□□□□□ -0.45
SDH1YKL148C JIP4Q03361 876 aa12.21□□□□□ -0.45
SDH1YKL148C TIF35Q04067 274 aaKnown RBP12.21□□□□□ -0.45
SDH1YKL148C ARP9Q05123 467 aa12.21□□□□□ -0.45
SDH1YKL148C AAD4Q07747 329 aa12.21□□□□□ -0.45
SDH1YKL148C SLD7Q08457 257 aa12.21□□□□□ -0.45
SDH1YKL148C TY3A-GQ12173 290 aa12.21□□□□□ -0.45
SDH1YKL148C TY3A-IQ99219 290 aa12.21□□□□□ -0.45
SDH1YKL148C HEM12P32347 362 aaPredicted RBP12.21□□□□□ -0.46
SDH1YKL148C GCD11P32481 527 aaKnown RBP12.21□□□□□ -0.46
SDH1YKL148C MEF2P39677 819 aa12.21□□□□□ -0.46
SDH1YKL148C MPH1P40562 993 aa12.21□□□□□ -0.46
SDH1YKL148C DCP2P53550 970 aaKnown RBP12.21□□□□□ -0.46
SDH1YKL148C KTR6P54070 446 aa12.21□□□□□ -0.46
SDH1YKL148C CSN9Q03981 162 aa12.21□□□□□ -0.46
SDH1YKL148C YPR097WQ06839 1073 aa12.21□□□□□ -0.46
SDH1YKL148C ATR1P13090 542 aa12.2□□□□□ -0.46
SDH1YKL148C PIK1P39104 1066 aa12.2□□□□□ -0.46
SDH1YKL148C REX2P54964 269 aaKnown RBP12.2□□□□□ -0.46
SDH1YKL148C YPL062WQ02781 134 aa12.2□□□□□ -0.46
SDH1YKL148C JIP5Q06214 492 aaPredicted RBP12.2□□□□□ -0.46
SDH1YKL148C RCL1Q08096 367 aaPredicted RBP12.2□□□□□ -0.46
SDH1YKL148C REC8Q12188 680 aa12.2□□□□□ -0.46
SDH1YKL148C HSP26P15992 214 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
SDH1YKL148C SEC15P22224 910 aa12.19□□□□□ -0.46
SDH1YKL148C ASK1P35734 292 aa12.19□□□□□ -0.46
SDH1YKL148C YHR182WP38870 785 aa12.19□□□□□ -0.46
SDH1YKL148C NPT1P39683 429 aaKnown RBP12.19□□□□□ -0.46
SDH1YKL148C FMP32P43557 207 aa12.19□□□□□ -0.46
SDH1YKL148C PUS5Q06244 254 aa12.19□□□□□ -0.46
SDH1YKL148C NSE1Q07913 336 aa12.19□□□□□ -0.46
SDH1YKL148C HSH49Q99181 213 aaPredicted RBP12.19□□□□□ -0.46
SDH1YKL148C ERG20P08524 352 aaKnown RBP12.19□□□□□ -0.46
SDH1YKL148C ATP12P22135 325 aa12.19□□□□□ -0.46
SDH1YKL148C SRP101P32916 621 aa12.19□□□□□ -0.46
SDH1YKL148C YBR259WP38338 688 aa12.19□□□□□ -0.46
SDH1YKL148C SRP68P38687 599 aaKnown RBP12.19□□□□□ -0.46
SDH1YKL148C SEC28P40509 296 aaKnown RBP12.19□□□□□ -0.46
SDH1YKL148C IAH1P41734 238 aa12.19□□□□□ -0.46
SDH1YKL148C DAN4P47179 1161 aa12.19□□□□□ -0.46
SDH1YKL148C NAN1Q02931 896 aaKnown RBP12.19□□□□□ -0.46
SDH1YKL148C DYN3Q04949 312 aa12.19□□□□□ -0.46
SDH1YKL148C GLO2Q05584 274 aa12.19□□□□□ -0.46
SDH1YKL148C SBP1P10080 294 aaKnown RBP12.18□□□□□ -0.46
SDH1YKL148C SEC63P14906 663 aa12.18□□□□□ -0.46
SDH1YKL148C AFT1P22149 690 aa12.18□□□□□ -0.46
SDH1YKL148C VPS3P23643 1011 aa12.18□□□□□ -0.46
SDH1YKL148C DAL1P32375 460 aa12.18□□□□□ -0.46
SDH1YKL148C AEP1P32493 518 aa12.18□□□□□ -0.46
SDH1YKL148C PRM9P39551 298 aa12.18□□□□□ -0.46
SDH1YKL148C SNL1P40548 159 aa12.18□□□□□ -0.46
SDH1YKL148C AIF1P52923 378 aa12.18□□□□□ -0.46
SDH1YKL148C NHX1Q04121 633 aa12.18□□□□□ -0.46
SDH1YKL148C DDC1Q08949 612 aa12.18□□□□□ -0.46
SDH1YKL148C COX6P00427 148 aa12.17□□□□□ -0.46
SDH1YKL148C PUP2P32379 260 aa12.17□□□□□ -0.46
SDH1YKL148C BCK2P33306 851 aa12.17□□□□□ -0.46
SDH1YKL148C SHE3P38272 425 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C YIL089WP40500 205 aa12.17□□□□□ -0.46
SDH1YKL148C NCS6P53088 359 aa12.17□□□□□ -0.46
SDH1YKL148C HPT1Q04178 221 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C APC5Q08683 685 aa12.17□□□□□ -0.46
SDH1YKL148C DBP10Q12389 995 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C SUI3P09064 285 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C GPT2P36148 743 aa12.17□□□□□ -0.46
SDH1YKL148C YBR053CP38235 358 aa12.17□□□□□ -0.46
SDH1YKL148C ARN1P38731 627 aa12.17□□□□□ -0.46
SDH1YKL148C FSH1P38777 243 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C CAB2P40506 365 aa12.17□□□□□ -0.46
SDH1YKL148C PRM2P40534 656 aa12.17□□□□□ -0.46
SDH1YKL148C RSC8P43609 557 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C RPS10BP46784 105 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C ADE12P80210 433 aaKnown RBP12.17□□□□□ -0.46
SDH1YKL148C TMA20P89886 181 aaPredicted RBP12.17□□□□□ -0.46
SDH1YKL148C SKI8Q02793 397 aaPredicted RBP12.17□□□□□ -0.46
SDH1YKL148C SEC10Q06245 871 aa12.17□□□□□ -0.46
SDH1YKL148C DNL4Q08387 944 aaPredicted RBP12.17□□□□□ -0.46
SDH1YKL148C RPS10AQ08745 105 aaPredicted RBP12.17□□□□□ -0.46
SDH1YKL148C PTC1P35182 281 aa12.16□□□□□ -0.46
SDH1YKL148C LHS1P36016 881 aa12.16□□□□□ -0.46
SDH1YKL148C RIM4P38741 713 aa12.16□□□□□ -0.46
SDH1YKL148C LAM1P38851 1228 aa12.16□□□□□ -0.46
SDH1YKL148C BNA3P47039 444 aaKnown RBP12.16□□□□□ -0.46
SDH1YKL148C YNL010WP53981 241 aaKnown RBP12.16□□□□□ -0.46
SDH1YKL148C MUK1Q02866 612 aa12.16□□□□□ -0.46
SDH1YKL148C BUD20Q08004 166 aaPredicted RBP12.16□□□□□ -0.46
SDH1YKL148C SPE1P08432 466 aa12.15□□□□□ -0.46
SDH1YKL148C CYS3P31373 394 aaKnown RBP12.15□□□□□ -0.46
SDH1YKL148C YKR015CP36111 568 aa12.15□□□□□ -0.46
SDH1YKL148C YEL028WP39989 153 aa12.15□□□□□ -0.46
SDH1YKL148C YNL115CP53925 644 aa12.15□□□□□ -0.46
SDH1YKL148C RLI1Q03195 608 aaKnown RBP12.15□□□□□ -0.46
SDH1YKL148C HDA3Q06623 655 aa12.15□□□□□ -0.46
SDH1YKL148C MET7Q08645 548 aa12.15□□□□□ -0.46
SDH1YKL148C TYW1Q08960 810 aaKnown RBP12.15□□□□□ -0.46
SDH1YKL148C NHA1Q99271 985 aa12.15□□□□□ -0.46
SDH1YKL148C TPK1P06244 397 aa12.15□□□□□ -0.46
SDH1YKL148C MET16P18408 261 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms