RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A VPS27P40343 622 aaKnown RBP2.36□□□□□ -2.03
HSK3YKL138C-A CFD1P40558 293 aa2.36□□□□□ -2.03
HSK3YKL138C-A LYS20P48570 428 aaKnown RBP2.36□□□□□ -2.03
HSK3YKL138C-A YGR021WP53212 290 aa2.36□□□□□ -2.03
HSK3YKL138C-A YER175W-AQ8TGU4 54 aa2.36□□□□□ -2.03
HSK3YKL138C-A VAS1P07806 1104 aaKnown RBP2.35□□□□□ -2.03
HSK3YKL138C-A AIM17P23180 465 aaKnown RBP2.35□□□□□ -2.03
HSK3YKL138C-A MRS6P32864 603 aaKnown RBP2.35□□□□□ -2.03
HSK3YKL138C-A ERC1P38767 581 aa2.35□□□□□ -2.03
HSK3YKL138C-A RRP8P38961 392 aaKnown RBP2.35□□□□□ -2.03
HSK3YKL138C-A SWD1P39706 426 aa2.35□□□□□ -2.03
HSK3YKL138C-A HIS6P40545 261 aa2.35□□□□□ -2.03
HSK3YKL138C-A ASK10P48361 1146 aa2.35□□□□□ -2.03
HSK3YKL138C-A GIS2P53849 153 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HSK3YKL138C-A VPS72Q03388 795 aa2.35□□□□□ -2.03
HSK3YKL138C-A TRI1Q05024 226 aa2.35□□□□□ -2.03
HSK3YKL138C-A YOR389WQ08912 624 aa2.35□□□□□ -2.03
HSK3YKL138C-A ICL2Q12031 575 aa2.35□□□□□ -2.03
HSK3YKL138C-A MSH1P25846 959 aa2.34□□□□□ -2.03
HSK3YKL138C-A RPT3P33298 428 aaKnown RBP2.34□□□□□ -2.03
HSK3YKL138C-A YHL041WP38730 149 aa2.34□□□□□ -2.03
HSK3YKL138C-A YLF2P38746 405 aa2.34□□□□□ -2.03
HSK3YKL138C-A ACA1P39970 489 aa2.34□□□□□ -2.03
HSK3YKL138C-A LAS21P40367 830 aa2.34□□□□□ -2.03
HSK3YKL138C-A FAF1P40546 346 aaPredicted RBP2.34□□□□□ -2.03
HSK3YKL138C-A CIR1P42940 261 aa2.34□□□□□ -2.03
HSK3YKL138C-A NPA3P47122 385 aa2.34□□□□□ -2.03
HSK3YKL138C-A YPR003CP53394 754 aa2.34□□□□□ -2.03
HSK3YKL138C-A ESF2P53743 316 aaKnown RBP2.34□□□□□ -2.03
HSK3YKL138C-A TEP1P53916 434 aa2.34□□□□□ -2.03
HSK3YKL138C-A GET3Q12154 354 aaKnown RBP2.34□□□□□ -2.03
HSK3YKL138C-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
HSK3YKL138C-A ARP7Q12406 477 aa2.34□□□□□ -2.03
HSK3YKL138C-A SEC18P18759 758 aaKnown RBP2.33□□□□□ -2.04
HSK3YKL138C-A KGD2P19262 463 aaPredicted RBP2.33□□□□□ -2.04
HSK3YKL138C-A TRX2P22803 104 aaKnown RBP2.33□□□□□ -2.04
HSK3YKL138C-A MGM1P32266 881 aa2.33□□□□□ -2.04
HSK3YKL138C-A FRD1P32614 470 aaKnown RBP2.33□□□□□ -2.04
HSK3YKL138C-A FUI1P38196 639 aa2.33□□□□□ -2.04
HSK3YKL138C-A VBA2P38358 474 aaKnown RBP2.33□□□□□ -2.04
HSK3YKL138C-A SPC97P38863 823 aa2.33□□□□□ -2.04
HSK3YKL138C-A LNP1P38878 278 aa2.33□□□□□ -2.04
HSK3YKL138C-A IES5P40060 125 aa2.33□□□□□ -2.04
HSK3YKL138C-A SAP185P40856 1058 aa2.33□□□□□ -2.04
HSK3YKL138C-A CDC1P40986 491 aa2.33□□□□□ -2.04
HSK3YKL138C-A QRI7P43122 407 aa2.33□□□□□ -2.04
HSK3YKL138C-A YAT1P80235 687 aa2.33□□□□□ -2.04
HSK3YKL138C-A AIM6Q07716 390 aa2.33□□□□□ -2.04
HSK3YKL138C-A AAD4Q07747 329 aa2.33□□□□□ -2.04
HSK3YKL138C-A YOL114CQ12322 202 aa2.33□□□□□ -2.04
HSK3YKL138C-A PIF1P07271 859 aa2.32□□□□□ -2.04
HSK3YKL138C-A MSS18P08593 268 aa2.32□□□□□ -2.04
HSK3YKL138C-A MSM1P22438 575 aa2.32□□□□□ -2.04
HSK3YKL138C-A ATO2P32907 282 aa2.32□□□□□ -2.04
HSK3YKL138C-A YIL152WP40455 235 aa2.32□□□□□ -2.04
HSK3YKL138C-A MAD3P47074 515 aa2.32□□□□□ -2.04
HSK3YKL138C-A TAM41P53230 385 aa2.32□□□□□ -2.04
HSK3YKL138C-A ECM16Q04217 1267 aaKnown RBP2.32□□□□□ -2.04
HSK3YKL138C-A SNA4Q07549 140 aa2.32□□□□□ -2.04
HSK3YKL138C-A CRD1Q07560 283 aa2.32□□□□□ -2.04
HSK3YKL138C-A NKP1Q12493 238 aa2.32□□□□□ -2.04
HSK3YKL138C-A COX1P00401 534 aa2.31□□□□□ -2.04
HSK3YKL138C-A CTT1P06115 562 aa2.31□□□□□ -2.04
HSK3YKL138C-A ILS1P09436 1072 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A MIS1P09440 975 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A RPL42AP0CX27 106 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A RPL42BP0CX28 106 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A NOP1P15646 327 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A CNA1P23287 553 aa2.31□□□□□ -2.04
HSK3YKL138C-A YCR043CP25361 127 aa2.31□□□□□ -2.04
HSK3YKL138C-A XRS2P33301 854 aa2.31□□□□□ -2.04
HSK3YKL138C-A MRPL36P36531 177 aa2.31□□□□□ -2.04
HSK3YKL138C-A MAF1P41910 395 aa2.31□□□□□ -2.04
HSK3YKL138C-A YJL107CP42947 387 aa2.31□□□□□ -2.04
HSK3YKL138C-A YGR079WP53249 370 aa2.31□□□□□ -2.04
HSK3YKL138C-A MOT3P54785 490 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A VPS64Q03944 604 aa2.31□□□□□ -2.04
HSK3YKL138C-A BLS1Q06071 122 aa2.31□□□□□ -2.04
HSK3YKL138C-A BRE1Q07457 700 aaKnown RBP2.31□□□□□ -2.04
HSK3YKL138C-A RRI1Q12468 440 aa2.31□□□□□ -2.04
HSK3YKL138C-A SWI4P25302 1093 aaKnown RBP2.3□□□□□ -2.04
HSK3YKL138C-A PTC6P25646 442 aa2.3□□□□□ -2.04
HSK3YKL138C-A DBF20P32328 564 aa2.3□□□□□ -2.04
HSK3YKL138C-A SSH4P32343 579 aa2.3□□□□□ -2.04
HSK3YKL138C-A SWE1P32944 819 aa2.3□□□□□ -2.04
HSK3YKL138C-A APM3P38153 483 aa2.3□□□□□ -2.04
HSK3YKL138C-A NPR3P38742 1146 aa2.3□□□□□ -2.04
HSK3YKL138C-A VPS41P38959 992 aa2.3□□□□□ -2.04
HSK3YKL138C-A STT3P39007 718 aaKnown RBP2.3□□□□□ -2.04
HSK3YKL138C-A RAD26P40352 1085 aa2.3□□□□□ -2.04
HSK3YKL138C-A YIR016WP40572 265 aa2.3□□□□□ -2.04
HSK3YKL138C-A MDV1P47025 714 aa2.3□□□□□ -2.04
HSK3YKL138C-A IML2P47031 731 aa2.3□□□□□ -2.04
HSK3YKL138C-A LSC1P53598 329 aaKnown RBP2.3□□□□□ -2.04
HSK3YKL138C-A MRPL1Q04599 285 aa2.3□□□□□ -2.04
HSK3YKL138C-A YMR034CQ05131 434 aaPredicted RBP2.3□□□□□ -2.04
HSK3YKL138C-A ECM22Q05958 814 aaPredicted RBP2.3□□□□□ -2.04
HSK3YKL138C-A OPY2Q06810 360 aa2.3□□□□□ -2.04
HSK3YKL138C-A SRL1Q08673 210 aa2.3□□□□□ -2.04
HSK3YKL138C-A YPL191CQ08930 360 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms