RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W SNO4Q04902 237 aa4.37□□□□□ -1.71
MSN4YKL062W THI22Q06490 572 aa4.37□□□□□ -1.71
MSN4YKL062W VPS36Q06696 566 aa4.37□□□□□ -1.71
MSN4YKL062W MLH2Q07980 695 aa4.37□□□□□ -1.71
MSN4YKL062W HSP33Q08914 237 aaKnown RBP4.37□□□□□ -1.71
MSN4YKL062W HSP32Q08992 237 aa4.37□□□□□ -1.71
MSN4YKL062W RTN2Q12443 393 aa4.37□□□□□ -1.71
MSN4YKL062W MIS1P09440 975 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W SWI6P09959 803 aa4.36□□□□□ -1.71
MSN4YKL062W ADH4P10127 382 aa4.36□□□□□ -1.71
MSN4YKL062W SEC65P29478 273 aa4.36□□□□□ -1.71
MSN4YKL062W RPN2P32565 945 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W SMI1P32566 505 aa4.36□□□□□ -1.71
MSN4YKL062W RPT3P33298 428 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W PHO11P35842 467 aa4.36□□□□□ -1.71
MSN4YKL062W UIP5P36137 443 aa4.36□□□□□ -1.71
MSN4YKL062W LAS1P36146 502 aaPredicted RBP4.36□□□□□ -1.71
MSN4YKL062W RFC1P38630 861 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W PHO12P38693 467 aa4.36□□□□□ -1.71
MSN4YKL062W YIL161WP40449 235 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W UBP7P40453 1071 aa4.36□□□□□ -1.71
MSN4YKL062W SDS3P40505 327 aa4.36□□□□□ -1.71
MSN4YKL062W SGF73P53165 657 aa4.36□□□□□ -1.71
MSN4YKL062W GND2P53319 492 aa4.36□□□□□ -1.71
MSN4YKL062W CIK1Q01649 594 aa4.36□□□□□ -1.71
MSN4YKL062W APL4Q12028 832 aa4.36□□□□□ -1.71
MSN4YKL062W PDH1Q12428 516 aaKnown RBP4.36□□□□□ -1.71
MSN4YKL062W OM45P16547 393 aa4.35□□□□□ -1.71
MSN4YKL062W ADK2P26364 225 aa4.35□□□□□ -1.71
MSN4YKL062W PUP2P32379 260 aa4.35□□□□□ -1.71
MSN4YKL062W BCS1P32839 456 aa4.35□□□□□ -1.71
MSN4YKL062W SAW1P39735 261 aa4.35□□□□□ -1.71
MSN4YKL062W ARF3P40994 183 aaRIP-Chip data4.35□□□□□ -1.71not detected
MSN4YKL062W CTF18P49956 741 aa4.35□□□□□ -1.71
MSN4YKL062W FHN1P53279 174 aa4.35□□□□□ -1.71
MSN4YKL062W OAZ1Q02803 292 aa4.35□□□□□ -1.71
MSN4YKL062W YML119WQ03208 357 aa4.35□□□□□ -1.71
MSN4YKL062W FCP1Q03254 732 aa4.35□□□□□ -1.71
MSN4YKL062W CWC21Q03375 135 aaKnown RBP4.35□□□□□ -1.71
MSN4YKL062W CLP1Q08685 445 aaPredicted RBP4.35□□□□□ -1.71
MSN4YKL062W CWC2Q12046 339 aaPredicted RBP4.35□□□□□ -1.71
MSN4YKL062W MLH3Q12083 715 aa4.35□□□□□ -1.71
MSN4YKL062W POM34Q12445 299 aa4.35□□□□□ -1.71
MSN4YKL062W APE1P14904 514 aa4.35□□□□□ -1.71
MSN4YKL062W LCB1P25045 558 aaKnown RBP4.35□□□□□ -1.71
MSN4YKL062W YPT7P32939 208 aa4.35□□□□□ -1.71
MSN4YKL062W FMP10P40098 244 aa4.35□□□□□ -1.71
MSN4YKL062W LAM5P43560 674 aa4.35□□□□□ -1.71
MSN4YKL062W BIT61P47041 543 aa4.35□□□□□ -1.71
MSN4YKL062W YNR068CP53754 272 aa4.35□□□□□ -1.71
MSN4YKL062W NOP15P53927 220 aaPredicted RBP4.35□□□□□ -1.71
MSN4YKL062W SMX3P54999 86 aaPredicted RBP4.35□□□□□ -1.71
MSN4YKL062W RCR2Q03446 210 aaKnown RBP4.35□□□□□ -1.71
MSN4YKL062W VBA4Q04602 768 aaKnown RBP4.35□□□□□ -1.71
MSN4YKL062W DBP9Q06218 594 aaKnown RBP4.35□□□□□ -1.71
MSN4YKL062W YPS7Q06325 596 aa4.35□□□□□ -1.71
MSN4YKL062W SEC15P22224 910 aa4.34□□□□□ -1.71
MSN4YKL062W MRPL25P23369 157 aa4.34□□□□□ -1.71
MSN4YKL062W PRP28P23394 588 aa4.34□□□□□ -1.71
MSN4YKL062W MCM3P24279 971 aaKnown RBP4.34□□□□□ -1.71
MSN4YKL062W SET3P36124 751 aa4.34□□□□□ -1.71
MSN4YKL062W PIM1P36775 1133 aa4.34□□□□□ -1.71
MSN4YKL062W CTM1P38818 585 aa4.34□□□□□ -1.71
MSN4YKL062W BUD16P39988 312 aa4.34□□□□□ -1.71
MSN4YKL062W SCS2P40075 244 aaKnown RBP4.34□□□□□ -1.71
MSN4YKL062W PIG2P40187 538 aa4.34□□□□□ -1.71
MSN4YKL062W PSF2P40359 213 aa4.34□□□□□ -1.71
MSN4YKL062W SPO22P40511 975 aa4.34□□□□□ -1.71
MSN4YKL062W AIP1P46680 615 aaKnown RBP4.34□□□□□ -1.71
MSN4YKL062W SAP4P53036 818 aa4.34□□□□□ -1.71
MSN4YKL062W AIM32Q04689 311 aa4.34□□□□□ -1.71
MSN4YKL062W IRC10Q08118 586 aa4.34□□□□□ -1.71
MSN4YKL062W MRH1Q12117 320 aaPredicted RBP4.34□□□□□ -1.71
MSN4YKL062W KIN82P25341 720 aa4.33□□□□□ -1.72
MSN4YKL062W MGM1P32266 881 aa4.33□□□□□ -1.72
MSN4YKL062W GCS1P35197 352 aa4.33□□□□□ -1.72
MSN4YKL062W MIC60P36112 540 aa4.33□□□□□ -1.72
MSN4YKL062W SIF2P38262 535 aa4.33□□□□□ -1.72
MSN4YKL062W YBR138CP38277 524 aa4.33□□□□□ -1.72
MSN4YKL062W OTU2P38747 307 aaKnown RBP4.33□□□□□ -1.72
MSN4YKL062W STL1P39932 569 aa4.33□□□□□ -1.72
MSN4YKL062W NDC80P40460 691 aa4.33□□□□□ -1.72
MSN4YKL062W CCT7P42943 550 aaKnown RBP4.33□□□□□ -1.72
MSN4YKL062W NNF2P53253 936 aa4.33□□□□□ -1.72
MSN4YKL062W YNR061CP53747 219 aa4.33□□□□□ -1.72
MSN4YKL062W PRO2P54885 456 aaKnown RBP4.33□□□□□ -1.72
MSN4YKL062W GYL1Q04322 720 aa4.33□□□□□ -1.72
MSN4YKL062W RSF1Q05043 376 aa4.33□□□□□ -1.72
MSN4YKL062W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
MSN4YKL062W BMS1Q08965 1183 aaKnown RBP4.33□□□□□ -1.72
MSN4YKL062W SKS1Q12505 502 aa4.33□□□□□ -1.72
MSN4YKL062W PCD1Q12524 340 aa4.33□□□□□ -1.72
MSN4YKL062W YOL159C-AQ3E769 90 aa4.33□□□□□ -1.72
MSN4YKL062W RPS17AP02407 136 aaKnown RBP4.32□□□□□ -1.72
MSN4YKL062W GCN4P03069 281 aa4.32□□□□□ -1.72
MSN4YKL062W RPS17BP14127 136 aaKnown RBP4.32□□□□□ -1.72
MSN4YKL062W MER1P16523 270 aa4.32□□□□□ -1.72
MSN4YKL062W CDC43P18898 376 aa4.32□□□□□ -1.72
MSN4YKL062W IME1P21190 360 aa4.32□□□□□ -1.72
MSN4YKL062W CLB4P24871 460 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms