RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C RPS4BP0CX36 261 aaKnown RBP6.77□□□□□ -1.33
CDC16YKL022C PRP28P23394 588 aa6.77□□□□□ -1.33
CDC16YKL022C NIP1P32497 812 aaKnown RBP6.77□□□□□ -1.33
CDC16YKL022C CST26P38226 397 aa6.77□□□□□ -1.33
CDC16YKL022C REG2P38232 338 aa6.77□□□□□ -1.33
CDC16YKL022C MUP3P38734 546 aa6.77□□□□□ -1.33
CDC16YKL022C CTF8P38877 133 aa6.77□□□□□ -1.33
CDC16YKL022C LCL3P53153 274 aa6.77□□□□□ -1.33
CDC16YKL022C THI22Q06490 572 aa6.77□□□□□ -1.33
CDC16YKL022C PHM7Q12252 991 aa6.77□□□□□ -1.33
CDC16YKL022C MDY2Q12285 212 aa6.77□□□□□ -1.33
CDC16YKL022C AFI1Q99222 893 aa6.77□□□□□ -1.33
CDC16YKL022C TRK2P28584 889 aa6.76□□□□□ -1.33
CDC16YKL022C MSP1P28737 362 aa6.76□□□□□ -1.33
CDC16YKL022C YEL043WP32618 956 aa6.76□□□□□ -1.33
CDC16YKL022C ARB1P40024 610 aaKnown RBP6.76□□□□□ -1.33
CDC16YKL022C MUB1Q03162 620 aa6.76□□□□□ -1.33
CDC16YKL022C EFR3Q03653 782 aaKnown RBP6.76□□□□□ -1.33
CDC16YKL022C SPH1Q06160 661 aa6.76□□□□□ -1.33
CDC16YKL022C PRP45P28004 379 aaPredicted RBP6.76□□□□□ -1.33
CDC16YKL022C VID24P38263 362 aa6.76□□□□□ -1.33
CDC16YKL022C STB5P38699 743 aa6.76□□□□□ -1.33
CDC16YKL022C DOT5P40553 215 aa6.76□□□□□ -1.33
CDC16YKL022C SGN1P40561 250 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CDC16YKL022C DSE4P53753 1117 aa6.76□□□□□ -1.33
CDC16YKL022C STP3Q05937 343 aa6.76□□□□□ -1.33
CDC16YKL022C ADE2P21264 571 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C LOT5P34234 306 aa6.75□□□□□ -1.33
CDC16YKL022C TDP1P38319 544 aa6.75□□□□□ -1.33
CDC16YKL022C YHL012WP38709 493 aa6.75□□□□□ -1.33
CDC16YKL022C YHR078WP38799 552 aa6.75□□□□□ -1.33
CDC16YKL022C PFA3P42836 336 aa6.75□□□□□ -1.33
CDC16YKL022C BIT61P47041 543 aa6.75□□□□□ -1.33
CDC16YKL022C SHE4P51534 789 aa6.75□□□□□ -1.33
CDC16YKL022C PPN1Q04119 674 aa6.75□□□□□ -1.33
CDC16YKL022C DON1Q05610 365 aa6.75□□□□□ -1.33
CDC16YKL022C OPT2Q06593 877 aa6.75□□□□□ -1.33
CDC16YKL022C SYT1Q06836 1226 aa6.75□□□□□ -1.33
CDC16YKL022C SGO1Q08490 590 aa6.75□□□□□ -1.33
CDC16YKL022C RIB2Q12362 591 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C PDC5P16467 563 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C DBP3P20447 523 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C DAD2P36162 133 aa6.75□□□□□ -1.33
CDC16YKL022C MTG2P38860 518 aa6.75□□□□□ -1.33
CDC16YKL022C SLZ1P40167 298 aa6.75□□□□□ -1.33
CDC16YKL022C AIP1P46680 615 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C MUS81Q04149 632 aaPredicted RBP6.75□□□□□ -1.33
CDC16YKL022C VBA4Q04602 768 aaKnown RBP6.75□□□□□ -1.33
CDC16YKL022C LUC7Q07508 261 aaPredicted RBP6.75□□□□□ -1.33
CDC16YKL022C YJR112W-AQ3E743 109 aa6.75□□□□□ -1.33
CDC16YKL022C RAS1P01119 309 aa6.74□□□□□ -1.33
CDC16YKL022C GEX2P36173 615 aa6.74□□□□□ -1.33
CDC16YKL022C KTR3P38130 404 aaPredicted RBP6.74□□□□□ -1.33
CDC16YKL022C YHR054CP38780 354 aa6.74□□□□□ -1.33
CDC16YKL022C LYS4P49367 693 aaPredicted RBP6.74□□□□□ -1.33
CDC16YKL022C RPA49Q01080 415 aaPredicted RBP6.74□□□□□ -1.33
CDC16YKL022C ARG5,6Q01217 863 aa6.74□□□□□ -1.33
CDC16YKL022C YEH1Q07804 573 aa6.74□□□□□ -1.33
CDC16YKL022C CRG1P38892 291 aaRIP-Chip data6.74□□□□□ -1.33 RIP-Chip
CDC16YKL022C YGR012WP53206 393 aa6.74□□□□□ -1.33
CDC16YKL022C HMO1Q03973 246 aaKnown RBP6.74□□□□□ -1.33
CDC16YKL022C DBP9Q06218 594 aaKnown RBP6.74□□□□□ -1.33
CDC16YKL022C NUS1Q12063 375 aa6.74□□□□□ -1.33
CDC16YKL022C TY1A-BLQ12266 440 aa6.74□□□□□ -1.33
CDC16YKL022C YML002WP0CF17 737 aa6.73□□□□□ -1.33
CDC16YKL022C SSE1P32589 693 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C POL12P38121 705 aaPredicted RBP6.73□□□□□ -1.33
CDC16YKL022C ALG14P38242 237 aa6.73□□□□□ -1.33
CDC16YKL022C SFB3P38810 929 aa6.73□□□□□ -1.33
CDC16YKL022C SDP1P40479 209 aa6.73□□□□□ -1.33
CDC16YKL022C SPO1P53541 631 aa6.73□□□□□ -1.33
CDC16YKL022C MRD1Q06106 887 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C RTC5Q12108 567 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C CHS5Q12114 671 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C YPT6Q99260 215 aa6.73□□□□□ -1.33
CDC16YKL022C DAP2P18962 818 aa6.73□□□□□ -1.33
CDC16YKL022C PHO84P25297 587 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C PAP1P29468 568 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C PRE2P30656 287 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C AUR1P36107 401 aaPredicted RBP6.73□□□□□ -1.33
CDC16YKL022C MAL33P38157 468 aa6.73□□□□□ -1.33
CDC16YKL022C YSW1P38280 609 aa6.73□□□□□ -1.33
CDC16YKL022C CCT6P39079 546 aa6.73□□□□□ -1.33
CDC16YKL022C AGX1P43567 385 aa6.73□□□□□ -1.33
CDC16YKL022C PRP31P49704 494 aaPredicted RBP6.73□□□□□ -1.33
CDC16YKL022C RBA50Q04418 439 aa6.73□□□□□ -1.33
CDC16YKL022C MGR3Q04472 501 aa6.73□□□□□ -1.33
CDC16YKL022C BUD7Q08754 746 aa6.73□□□□□ -1.33
CDC16YKL022C LYS21Q12122 440 aaKnown RBP6.73□□□□□ -1.33
CDC16YKL022C DFR1P07807 211 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
CDC16YKL022C VPS17P32913 551 aa6.72□□□□□ -1.33
CDC16YKL022C EHT1P38295 451 aa6.72□□□□□ -1.33
CDC16YKL022C FTR1P40088 404 aa6.72□□□□□ -1.33
CDC16YKL022C CFT2Q12102 859 aaPredicted RBP6.72□□□□□ -1.33
CDC16YKL022C CTF3Q12748 733 aa6.72□□□□□ -1.33
CDC16YKL022C MKT1P40850 830 aaKnown RBP6.72□□□□□ -1.33
CDC16YKL022C STU2P46675 888 aa6.72□□□□□ -1.33
CDC16YKL022C ASE1P50275 885 aa6.72□□□□□ -1.33
CDC16YKL022C MSC2Q03455 724 aa6.72□□□□□ -1.33
CDC16YKL022C SOV1Q04748 898 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms