RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W FMP33P46998 180 aa3.55□□□□□ -1.84
NSP1YJL041W LYS5P50113 272 aa3.55□□□□□ -1.84
NSP1YJL041W BOP3P53958 396 aa3.55□□□□□ -1.84
NSP1YJL041W MEC3Q02574 474 aa3.55□□□□□ -1.84
NSP1YJL041W RMI1Q02685 241 aa3.55□□□□□ -1.84
NSP1YJL041W NAN1Q02931 896 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W USA1Q03714 838 aa3.55□□□□□ -1.84
NSP1YJL041W YDR179W-AQ03983 463 aa3.55□□□□□ -1.84
NSP1YJL041W DON1Q05610 365 aa3.55□□□□□ -1.84
NSP1YJL041W NKP2Q06162 153 aa3.55□□□□□ -1.84
NSP1YJL041W SFH1Q06168 426 aa3.55□□□□□ -1.84
NSP1YJL041W YPR196WQ06595 470 aa3.55□□□□□ -1.84
NSP1YJL041W YAP7Q08182 245 aa3.55□□□□□ -1.84
NSP1YJL041W YLR125WQ12138 136 aa3.55□□□□□ -1.84
NSP1YJL041W ARP7Q12406 477 aa3.55□□□□□ -1.84
NSP1YJL041W CMR1Q12510 522 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W DFG16Q99234 619 aa3.55□□□□□ -1.84
NSP1YJL041W CET1O13297 549 aaPredicted RBP3.55□□□□□ -1.84
NSP1YJL041W COBP00163 385 aa3.55□□□□□ -1.84
NSP1YJL041W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84 RIP-Chip
NSP1YJL041W MRP2P10663 115 aaPredicted RBP3.55□□□□□ -1.84
NSP1YJL041W HMG2P12684 1045 aa3.55□□□□□ -1.84
NSP1YJL041W DBP3P20447 523 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W APL1P27351 700 aa3.55□□□□□ -1.84
NSP1YJL041W UBP11P36026 717 aa3.55□□□□□ -1.84
NSP1YJL041W STV1P37296 890 aa3.55□□□□□ -1.84
NSP1YJL041W STN1P38960 494 aa3.55□□□□□ -1.84
NSP1YJL041W PIC2P40035 300 aa3.55□□□□□ -1.84
NSP1YJL041W DSE1P40077 573 aa3.55□□□□□ -1.84
NSP1YJL041W MND2P40577 368 aa3.55□□□□□ -1.84
NSP1YJL041W PRP24P49960 444 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W YGL108CP53139 140 aa3.55□□□□□ -1.84
NSP1YJL041W PBP1P53297 722 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W BIO5P53744 561 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W MAK10Q02197 733 aa3.55□□□□□ -1.84
NSP1YJL041W RPM2Q02773 1202 aa3.55□□□□□ -1.84
NSP1YJL041W HOT1Q03213 719 aa3.55□□□□□ -1.84
NSP1YJL041W SPO20Q04359 397 aa3.55□□□□□ -1.84
NSP1YJL041W DUS3Q06053 668 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W SGD1Q06132 899 aa3.55□□□□□ -1.84
NSP1YJL041W IRC3Q06683 689 aa3.55□□□□□ -1.84
NSP1YJL041W MRL1Q06815 381 aa3.55□□□□□ -1.84
NSP1YJL041W YEH2Q07950 538 aa3.55□□□□□ -1.84
NSP1YJL041W MED2Q12124 431 aa3.55□□□□□ -1.84
NSP1YJL041W BUD3P25558 1636 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-LR1P0C2J3 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-FP0CX63 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-GR2P0CX64 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-CP25384 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-DR2Q03494 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY1B-DR1Q03855 1755 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-DR3Q07791 1770 aaKnown RBP3.55□□□□□ -1.84
NSP1YJL041W TY2B-OR1Q12113 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-DR1Q12472 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-BQ12491 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY2B-OR2Q12501 1770 aa3.55□□□□□ -1.84
NSP1YJL041W TY1B-DR3Q99231 1755 aa3.55□□□□□ -1.84
NSP1YJL041W YMR084WA2P2R3 262 aa3.54□□□□□ -1.84
NSP1YJL041W KRE6P32486 720 aa3.54□□□□□ -1.84
NSP1YJL041W CYM1P32898 989 aa3.54□□□□□ -1.84
NSP1YJL041W ETR1P38071 380 aa3.54□□□□□ -1.84
NSP1YJL041W YHL017WP38745 532 aa3.54□□□□□ -1.84
NSP1YJL041W PAN5P38787 379 aa3.54□□□□□ -1.84
NSP1YJL041W RTT105P40063 208 aa3.54□□□□□ -1.84
NSP1YJL041W YRB2P40517 327 aa3.54□□□□□ -1.84
NSP1YJL041W FET4P40988 552 aa3.54□□□□□ -1.84
NSP1YJL041W TDA10P42938 290 aa3.54□□□□□ -1.84
NSP1YJL041W LOC1P43586 204 aaPredicted RBP3.54□□□□□ -1.84
NSP1YJL041W RPE1P46969 238 aa3.54□□□□□ -1.84
NSP1YJL041W MSE1P48525 536 aa3.54□□□□□ -1.84
NSP1YJL041W ARO8P53090 500 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W GET1P53192 235 aa3.54□□□□□ -1.84
NSP1YJL041W SNF12P53628 566 aa3.54□□□□□ -1.84
NSP1YJL041W YDR239CQ03780 787 aa3.54□□□□□ -1.84
NSP1YJL041W UTP5Q04177 643 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W TDA5Q06417 326 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W OPI10Q08202 246 aa3.54□□□□□ -1.84
NSP1YJL041W LAP2Q10740 671 aa3.54□□□□□ -1.84
NSP1YJL041W ATG11Q12527 1178 aa3.54□□□□□ -1.84
NSP1YJL041W FOB1O13329 566 aa3.54□□□□□ -1.84
NSP1YJL041W GCR1P07261 785 aa3.54□□□□□ -1.84
NSP1YJL041W KGD2P19262 463 aaPredicted RBP3.54□□□□□ -1.84
NSP1YJL041W CMK2P22517 447 aa3.54□□□□□ -1.84
NSP1YJL041W TRX2P22803 104 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W CAM1P29547 415 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W GCG1P32656 232 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W NIC96P34077 839 aa3.54□□□□□ -1.84
NSP1YJL041W CLG1P35190 452 aa3.54□□□□□ -1.84
NSP1YJL041W MAL33P38157 468 aa3.54□□□□□ -1.84
NSP1YJL041W UTP9P38882 575 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W SUR2P38992 349 aa3.54□□□□□ -1.84
NSP1YJL041W AIM2P39721 246 aa3.54□□□□□ -1.84
NSP1YJL041W FMP10P40098 244 aa3.54□□□□□ -1.84
NSP1YJL041W ALG5P40350 334 aa3.54□□□□□ -1.84
NSP1YJL041W DIM1P41819 318 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W IRC5P43610 853 aa3.54□□□□□ -1.84
NSP1YJL041W MNN11P46985 422 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W YGR067CP53243 804 aa3.54□□□□□ -1.84
NSP1YJL041W UTP8P53276 713 aaKnown RBP3.54□□□□□ -1.84
NSP1YJL041W BSC5P53755 489 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms