RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W TYE7P33122 291 aaPredicted RBP14.07□□□□□ -0.16
RPN10YHR200W ARH1P48360 493 aa14.07□□□□□ -0.16
RPN10YHR200W CDC123Q05791 360 aa14.07□□□□□ -0.16
RPN10YHR200W RSC2Q06488 889 aa14.07□□□□□ -0.16
RPN10YHR200W ADY3Q07732 790 aa14.07□□□□□ -0.16
RPN10YHR200W INO1P11986 533 aa14.06□□□□□ -0.16
RPN10YHR200W HRR25P29295 494 aaKnown RBP14.06□□□□□ -0.16
RPN10YHR200W SRP101P32916 621 aa14.06□□□□□ -0.16
RPN10YHR200W APM3P38153 483 aa14.06□□□□□ -0.16
RPN10YHR200W SEC28P40509 296 aaKnown RBP14.06□□□□□ -0.16
RPN10YHR200W ASN2P49090 572 aaKnown RBP14.06□□□□□ -0.16
RPN10YHR200W TUB4P53378 473 aa14.06□□□□□ -0.16
RPN10YHR200W RCF2P53721 224 aa14.06□□□□□ -0.16
RPN10YHR200W YMR206WQ03695 313 aa14.06□□□□□ -0.16
RPN10YHR200W NHX1Q04121 633 aa14.06□□□□□ -0.16
RPN10YHR200W SEG1Q04279 960 aa14.06□□□□□ -0.16
RPN10YHR200W YCS4Q06156 1176 aa14.06□□□□□ -0.16
RPN10YHR200W OCA6Q12454 224 aa14.06□□□□□ -0.16
RPN10YHR200W KCS1Q12494 1050 aa14.06□□□□□ -0.16
RPN10YHR200W ENO1P00924 437 aaKnown RBP14.05□□□□□ -0.16
RPN10YHR200W ATP12P22135 325 aa14.05□□□□□ -0.16
RPN10YHR200W STR3P53101 465 aaKnown RBP14.05□□□□□ -0.16
RPN10YHR200W BIO4P53630 237 aa14.05□□□□□ -0.16
RPN10YHR200W TAF11Q04226 346 aa14.05□□□□□ -0.16
RPN10YHR200W YDR109CQ04585 715 aa14.05□□□□□ -0.16
RPN10YHR200W YOR387CQ08910 206 aa14.05□□□□□ -0.16
RPN10YHR200W AAT2P23542 418 aaKnown RBP14.04□□□□□ -0.16
RPN10YHR200W MRE11P32829 692 aa14.04□□□□□ -0.16
RPN10YHR200W RDH54P38086 958 aa14.04□□□□□ -0.16
RPN10YHR200W MRP21P38175 177 aa14.04□□□□□ -0.16
RPN10YHR200W GDT1P38301 280 aaPredicted RBP14.04□□□□□ -0.16
RPN10YHR200W YFL012WP43580 148 aa14.04□□□□□ -0.16
RPN10YHR200W BUD13P46947 266 aaPredicted RBP14.04□□□□□ -0.16
RPN10YHR200W TEP1P53916 434 aa14.04□□□□□ -0.16
RPN10YHR200W GSF2Q04697 403 aaKnown RBP14.04□□□□□ -0.16
RPN10YHR200W SST2P11972 698 aaKnown RBP14.03□□□□□ -0.16
RPN10YHR200W AMD2P22580 549 aa14.03□□□□□ -0.16
RPN10YHR200W HEM3P28789 327 aa14.03□□□□□ -0.16
RPN10YHR200W DEP1P31385 405 aa14.03□□□□□ -0.16
RPN10YHR200W RRP14P36080 434 aaKnown RBP14.03□□□□□ -0.16
RPN10YHR200W YJL206CP39529 758 aa14.03□□□□□ -0.16
RPN10YHR200W EXO1P39875 702 aa14.03□□□□□ -0.16
RPN10YHR200W TAF6P53040 516 aa14.03□□□□□ -0.16
RPN10YHR200W TIM13P53299 105 aa14.03□□□□□ -0.16
RPN10YHR200W GND2P53319 492 aa14.03□□□□□ -0.16
RPN10YHR200W PET117Q02771 107 aa14.03□□□□□ -0.16
RPN10YHR200W TRS31Q03337 283 aa14.03□□□□□ -0.16
RPN10YHR200W RPN4Q03465 531 aa14.03□□□□□ -0.16
RPN10YHR200W YSH1Q06224 779 aaPredicted RBP14.03□□□□□ -0.16
RPN10YHR200W CMS1Q07897 291 aaKnown RBP14.03□□□□□ -0.16
RPN10YHR200W SPE4Q12455 300 aa14.03□□□□□ -0.16
RPN10YHR200W RGS2Q99188 309 aa14.03□□□□□ -0.16
RPN10YHR200W DAL81P21657 970 aa14.02□□□□□ -0.17
RPN10YHR200W MRPL8P22353 238 aa14.02□□□□□ -0.17
RPN10YHR200W YSP3P25036 478 aa14.02□□□□□ -0.17
RPN10YHR200W TFA2P36145 328 aa14.02□□□□□ -0.17
RPN10YHR200W MEF2P39677 819 aa14.02□□□□□ -0.17
RPN10YHR200W TDA10P42938 290 aa14.02□□□□□ -0.17
RPN10YHR200W PEX8P53248 589 aa14.02□□□□□ -0.17
RPN10YHR200W BUD22Q04347 519 aaKnown RBP14.02□□□□□ -0.17
RPN10YHR200W TRE2Q08693 809 aa14.02□□□□□ -0.17
RPN10YHR200W SCH9P11792 824 aaKnown RBP14.01□□□□□ -0.17
RPN10YHR200W ACO1P19414 778 aaKnown RBP RIP-Chip data14.01□□□□□ -0.17not detected
RPN10YHR200W CLN1P20437 546 aa14.01□□□□□ -0.17
RPN10YHR200W AAD3P25612 363 aa14.01□□□□□ -0.17
RPN10YHR200W MSH2P25847 964 aa14.01□□□□□ -0.17
RPN10YHR200W BEM3P32873 1128 aa14.01□□□□□ -0.17
RPN10YHR200W CYM1P32898 989 aa14.01□□□□□ -0.17
RPN10YHR200W CTF13P35203 478 aa14.01□□□□□ -0.17
RPN10YHR200W RGI2P40188 164 aa14.01□□□□□ -0.17
RPN10YHR200W KTR7P40504 517 aa14.01□□□□□ -0.17
RPN10YHR200W RPN9Q04062 393 aaKnown RBP14.01□□□□□ -0.17
RPN10YHR200W YLR177WQ06251 628 aa14.01□□□□□ -0.17
RPN10YHR200W CLP1Q08685 445 aaPredicted RBP14.01□□□□□ -0.17
RPN10YHR200W SLP1Q12232 587 aa14.01□□□□□ -0.17
RPN10YHR200W GCY1P14065 312 aaKnown RBP RIP-Chip data14□□□□□ -0.17not detected
RPN10YHR200W EMC1P25574 760 aa14□□□□□ -0.17
RPN10YHR200W COY1P34237 679 aa14□□□□□ -0.17
RPN10YHR200W YBR032WP38223 100 aa14□□□□□ -0.17
RPN10YHR200W YSW1P38280 609 aa14□□□□□ -0.17
RPN10YHR200W PEP8P40335 379 aa14□□□□□ -0.17
RPN10YHR200W SIP4P46954 829 aa14□□□□□ -0.17
RPN10YHR200W YGL140CP53120 1219 aa14□□□□□ -0.17
RPN10YHR200W SHE9Q04172 456 aa14□□□□□ -0.17
RPN10YHR200W YDR344CQ05510 147 aa14□□□□□ -0.17
RPN10YHR200W PEX15Q08215 383 aa14□□□□□ -0.17
RPN10YHR200W PEX11Q12462 236 aa14□□□□□ -0.17
RPN10YHR200W ERG20P08524 352 aaKnown RBP13.99□□□□□ -0.17
RPN10YHR200W DCC1P25559 380 aa13.99□□□□□ -0.17
RPN10YHR200W TOM20P35180 183 aa13.99□□□□□ -0.17
RPN10YHR200W HEM14P40012 539 aa13.99□□□□□ -0.17
RPN10YHR200W YJL107CP42947 387 aa13.99□□□□□ -0.17
RPN10YHR200W IST1P53843 298 aaPredicted RBP13.99□□□□□ -0.17
RPN10YHR200W NUP100Q02629 959 aa13.99□□□□□ -0.17
RPN10YHR200W BUD20Q08004 166 aaPredicted RBP13.99□□□□□ -0.17
RPN10YHR200W SLD7Q08457 257 aa13.99□□□□□ -0.17
RPN10YHR200W NDD1Q08887 554 aa13.99□□□□□ -0.17
RPN10YHR200W ARF2P19146 181 aaKnown RBP13.98□□□□□ -0.17
RPN10YHR200W PHA2P32452 334 aa13.98□□□□□ -0.17
RPN10YHR200W LIP5P32875 414 aa13.98□□□□□ -0.17
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms