RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFB3	YHR098C	PEX3	P28795	441 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	PRO3	P32263	286 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	DUG2	P38149	878 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	YBR071W	P38243	211 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	EXO5	P38289	585 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	POP4	P38336	279 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
SFB3	YHR098C	HPM1	P40481	377 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	ALG2	P43636	503 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	NUT1	P53114	1132 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	CBK1	P53894	756 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	REX2	P54964	269 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	FOX2	Q02207	900 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	YMR226C	Q05016	267 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	YPL191C	Q08930	360 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	THP3	Q12049	470 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	RHO1	P06780	209 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	PRP22	P24384	1145 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	KAR4	P25583	335 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	DOM34	P33309	386 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	GLG1	P36143	616 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	MAP2	P38174	421 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	SDH8	P38345	138 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	VMA7	P39111	118 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	PHB1	P40961	287 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	FIG4	P42837	879 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	SAD1	P43589	448 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	CIT3	P43635	486 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	CTR1	P49573	406 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	NBP1	P52919	319 aa	Predicted RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	HOL1	P53389	586 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	RET3	P53600	189 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	RNY1	Q02933	434 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	MYO5	Q04439	1219 aa	Known RBP	5.76	□□□□□ -1.49
SFB3	YHR098C	YCS4	Q06156	1176 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	ARR2	Q06597	130 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	CDC73	Q06697	393 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	TRE1	Q08919	783 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	ARP6	Q12509	438 aa		5.76	□□□□□ -1.49
SFB3	YHR098C	MYO1	P08964	1928 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	HOM3	P10869	527 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PEX1	P24004	1043 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	CCR4	P31384	837 aa	Known RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	NUP2	P32499	720 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	TYE7	P33122	291 aa	Predicted RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	STB6	P36085	766 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PIC2	P40035	300 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	MAD3	P47074	515 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	ATH1	P48016	1211 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	ISM1	P48526	1002 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	TEP1	P53916	434 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	KTR5	P53966	522 aa	Predicted RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	CIA1	Q05583	330 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	YLR297W	Q05899	129 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	FAR10	Q06001	478 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	TCO89	Q08921	799 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	VPS54	Q12071	889 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	HSP42	Q12329	375 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	RED1	P14291	827 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PHO81	P17442	1178 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PRP5	P21372	849 aa	Predicted RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	DBF4	P32325	704 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	HEM12	P32347	362 aa	Predicted RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	SRP101	P32916	621 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	EAP1	P36041	632 aa	Known RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	MTG2	P38860	518 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	SER3	P40054	469 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	INP51	P40559	946 aa	Known RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	MSS2	P40990	351 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	FET5	P43561	622 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	IML2	P47031	731 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	SSN8	P47821	323 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	BPL1	P48445	690 aa	Predicted RBP	5.75	□□□□□ -1.49
SFB3	YHR098C	MPS2	P53159	387 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	YBP2	P53169	641 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	DSE4	P53753	1117 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	INM2	Q05533	292 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PEX10	Q05568	337 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	REH1	Q06709	432 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	YDL057W	Q07379	328 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
SFB3	YHR098C	HER1	Q12276	1246 aa		5.75	□□□□□ -1.49
SFB3	YHR098C	GAL1	P04385	528 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	CYT1	P07143	309 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	CTR86	P25355	563 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	THI4	P32318	326 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	SPR1	P32603	445 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	UGP1	P32861	499 aa	Known RBP	5.74	□□□□□ -1.49
SFB3	YHR098C	RDH54	P38086	958 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	ESL1	P40456	1118 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	BIR1	P47134	954 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	RAI1	P53063	387 aa	Known RBP	5.74	□□□□□ -1.49
SFB3	YHR098C	GUP1	P53154	560 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	DBP6	P53734	629 aa	Known RBP	5.74	□□□□□ -1.49
SFB3	YHR098C	MRPL13	Q02204	264 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	ADI1	Q03677	179 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	DXO1	Q06349	442 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	PIB1	Q06651	286 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	FMP45	Q07651	309 aa		5.74	□□□□□ -1.49
SFB3	YHR098C	LOT6	Q07923	191 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms