RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C KAR3P17119 729 aa8.29□□□□□ -1.08
SOD2YHR008C GAL11P19659 1081 aa8.29□□□□□ -1.08
SOD2YHR008C PRI2P20457 528 aa8.29□□□□□ -1.08
SOD2YHR008C MRC1P25588 1096 aa8.29□□□□□ -1.08
SOD2YHR008C PAT1P25644 796 aaKnown RBP8.29□□□□□ -1.08
SOD2YHR008C MVD1P32377 396 aaKnown RBP8.29□□□□□ -1.08
SOD2YHR008C IRS4P36115 615 aaKnown RBP8.29□□□□□ -1.08
SOD2YHR008C EXO5P38289 585 aa8.29□□□□□ -1.08
SOD2YHR008C TIM17P39515 158 aa8.29□□□□□ -1.08
SOD2YHR008C YFR018CP43599 363 aa8.29□□□□□ -1.08
SOD2YHR008C ALK1P43633 760 aaKnown RBP8.29□□□□□ -1.08
SOD2YHR008C YGL108CP53139 140 aa8.29□□□□□ -1.08
SOD2YHR008C VAC7P53950 1165 aa8.29□□□□□ -1.08
SOD2YHR008C YMR160WQ03823 816 aa8.29□□□□□ -1.08
SOD2YHR008C HSP42Q12329 375 aa8.29□□□□□ -1.08
SOD2YHR008C TUB3P09734 445 aaKnown RBP8.28□□□□□ -1.08
SOD2YHR008C PDC5P16467 563 aaKnown RBP8.28□□□□□ -1.08
SOD2YHR008C UBA1P22515 1024 aaKnown RBP8.28□□□□□ -1.08
SOD2YHR008C NTH1P32356 751 aa8.28□□□□□ -1.08
SOD2YHR008C SPC110P32380 944 aa8.28□□□□□ -1.08
SOD2YHR008C ARA1P38115 344 aa8.28□□□□□ -1.08
SOD2YHR008C SWC5P38326 303 aa8.28□□□□□ -1.08
SOD2YHR008C RPH1P39956 796 aa8.28□□□□□ -1.08
SOD2YHR008C YNL040WP53960 456 aaPredicted RBP8.28□□□□□ -1.08
SOD2YHR008C BET4Q00618 327 aa8.28□□□□□ -1.08
SOD2YHR008C UFO1Q04511 668 aa8.28□□□□□ -1.08
SOD2YHR008C SWC7Q06707 132 aa8.28□□□□□ -1.08
SOD2YHR008C TRM8Q12009 286 aa8.28□□□□□ -1.08
SOD2YHR008C NHA1Q99271 985 aa8.28□□□□□ -1.08
SOD2YHR008C CDC13P32797 924 aaKnown RBP8.27□□□□□ -1.09
SOD2YHR008C ELM1P32801 640 aa8.27□□□□□ -1.09
SOD2YHR008C SCD5P34758 872 aa8.27□□□□□ -1.09
SOD2YHR008C RPC25P35718 212 aa8.27□□□□□ -1.09
SOD2YHR008C IML3P38265 245 aa8.27□□□□□ -1.09
SOD2YHR008C STN1P38960 494 aa8.27□□□□□ -1.09
SOD2YHR008C YER130CP39959 443 aa8.27□□□□□ -1.09
SOD2YHR008C SLX8P40072 274 aa8.27□□□□□ -1.09
SOD2YHR008C MNN11P46985 422 aaKnown RBP8.27□□□□□ -1.09
SOD2YHR008C YGL260WP53056 76 aa8.27□□□□□ -1.09
SOD2YHR008C CDA1Q06702 301 aa8.27□□□□□ -1.09
SOD2YHR008C CDC37P06101 506 aaKnown RBP8.26□□□□□ -1.09
SOD2YHR008C YCR006CP25350 157 aa8.26□□□□□ -1.09
SOD2YHR008C SPT16P32558 1035 aaKnown RBP8.26□□□□□ -1.09
SOD2YHR008C SEF1P34228 1148 aa8.26□□□□□ -1.09
SOD2YHR008C MTG2P38860 518 aa8.26□□□□□ -1.09
SOD2YHR008C ERP2P39704 215 aa8.26□□□□□ -1.09
SOD2YHR008C IST3P40565 148 aaPredicted RBP8.26□□□□□ -1.09
SOD2YHR008C SSU1P41930 458 aa8.26□□□□□ -1.09
SOD2YHR008C TRF5P48561 642 aaKnown RBP8.26□□□□□ -1.09
SOD2YHR008C ERV41Q04651 352 aa8.26□□□□□ -1.09
SOD2YHR008C FMP45Q07651 309 aa8.26□□□□□ -1.09
SOD2YHR008C PGC1Q08959 321 aa8.26□□□□□ -1.09
SOD2YHR008C GPA1P08539 472 aa8.25□□□□□ -1.09
SOD2YHR008C RFA2P26754 273 aaKnown RBP8.25□□□□□ -1.09
SOD2YHR008C NIP100P33420 868 aa8.25□□□□□ -1.09
SOD2YHR008C ASK10P48361 1146 aa8.25□□□□□ -1.09
SOD2YHR008C NRD1P53617 575 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SOD2YHR008C YPR078CQ06813 372 aa8.25□□□□□ -1.09
SOD2YHR008C OCA6Q12454 224 aa8.25□□□□□ -1.09
SOD2YHR008C HOP09932 586 aa8.24□□□□□ -1.09
SOD2YHR008C SEC62P21825 274 aa8.24□□□□□ -1.09
SOD2YHR008C EPT1P22140 391 aa8.24□□□□□ -1.09
SOD2YHR008C PHO84P25297 587 aaKnown RBP8.24□□□□□ -1.09
SOD2YHR008C HOG1P32485 435 aa8.24□□□□□ -1.09
SOD2YHR008C SQT1P35184 431 aa8.24□□□□□ -1.09
SOD2YHR008C MRPL37P36532 105 aa8.24□□□□□ -1.09
SOD2YHR008C ADE17P38009 592 aaKnown RBP8.24□□□□□ -1.09
SOD2YHR008C MGS1P40151 587 aa8.24□□□□□ -1.09
SOD2YHR008C BUD13P46947 266 aaPredicted RBP8.24□□□□□ -1.09
SOD2YHR008C IKS1P47042 667 aa8.24□□□□□ -1.09
SOD2YHR008C CDC55Q00362 526 aa8.24□□□□□ -1.09
SOD2YHR008C VMS1Q04311 632 aaKnown RBP8.24□□□□□ -1.09
SOD2YHR008C GFD1Q04839 188 aaKnown RBP8.24□□□□□ -1.09
SOD2YHR008C YLR030WQ07967 263 aa8.24□□□□□ -1.09
SOD2YHR008C EFG1Q3E705 233 aaKnown RBP8.24□□□□□ -1.09
SOD2YHR008C CLC1P17891 233 aa8.23□□□□□ -1.09
SOD2YHR008C MSB1P21339 1137 aaKnown RBP8.23□□□□□ -1.09
SOD2YHR008C RBK1P25332 333 aa8.23□□□□□ -1.09
SOD2YHR008C TMN3P40071 706 aa8.23□□□□□ -1.09
SOD2YHR008C HLJ1P48353 224 aa8.23□□□□□ -1.09
SOD2YHR008C HST3P53687 447 aa8.23□□□□□ -1.09
SOD2YHR008C PEX25Q02969 394 aa8.23□□□□□ -1.09
SOD2YHR008C YDR222WQ04925 415 aa8.23□□□□□ -1.09
SOD2YHR008C CIA1Q05583 330 aa8.23□□□□□ -1.09
SOD2YHR008C TGL5Q12043 749 aa8.23□□□□□ -1.09
SOD2YHR008C FRT1Q99332 602 aa8.23□□□□□ -1.09
SOD2YHR008C IZH4Q99393 312 aa8.23□□□□□ -1.09
SOD2YHR008C AI4P03878 556 aa8.22□□□□□ -1.09
SOD2YHR008C APA1P16550 321 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C TRX1P22217 103 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C SIN4P32259 974 aa8.22□□□□□ -1.09
SOD2YHR008C SPS19P32573 292 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C RRN6P32786 894 aa8.22□□□□□ -1.09
SOD2YHR008C PET112P33893 541 aa8.22□□□□□ -1.09
SOD2YHR008C BIT2P38346 545 aa8.22□□□□□ -1.09
SOD2YHR008C DED81P38707 554 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C CCT5P40413 562 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C HYR1P40581 163 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C MVP1P40959 511 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C RRT5P43607 289 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms