RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YMC1P32331 307 aa3.71□□□□□ -1.82
SEC4YFL005W TEF4P36008 412 aaKnown RBP3.71□□□□□ -1.82
SEC4YFL005W TAM41P53230 385 aa3.71□□□□□ -1.82
SEC4YFL005W COG2P53271 262 aa3.71□□□□□ -1.82
SEC4YFL005W CSL4P53859 292 aaPredicted RBP3.71□□□□□ -1.82
SEC4YFL005W YML119WQ03208 357 aa3.71□□□□□ -1.82
SEC4YFL005W GTB1Q04924 702 aa3.71□□□□□ -1.82
SEC4YFL005W MRI1Q06489 411 aaKnown RBP3.71□□□□□ -1.82
SEC4YFL005W ATG23Q06671 453 aa3.71□□□□□ -1.82
SEC4YFL005W NEW1Q08972 1196 aaKnown RBP3.71□□□□□ -1.82
SEC4YFL005W TRM8Q12009 286 aa3.71□□□□□ -1.82
SEC4YFL005W ULA1Q12059 462 aa3.71□□□□□ -1.82
SEC4YFL005W LCB4Q12246 624 aa3.71□□□□□ -1.82
SEC4YFL005W COX17Q12287 69 aa3.71□□□□□ -1.82
SEC4YFL005W PNO1Q99216 274 aaKnown RBP3.71□□□□□ -1.82
SEC4YFL005W ATP2P00830 511 aaKnown RBP3.7□□□□□ -1.82
SEC4YFL005W SPO16P17122 198 aa3.7□□□□□ -1.82
SEC4YFL005W AAD3P25612 363 aa3.7□□□□□ -1.82
SEC4YFL005W ADY2P25613 283 aa3.7□□□□□ -1.82
SEC4YFL005W SIP1P32578 815 aa3.7□□□□□ -1.82
SEC4YFL005W GDA1P32621 518 aa3.7□□□□□ -1.82
SEC4YFL005W RPF2P36160 344 aaKnown RBP3.7□□□□□ -1.82
SEC4YFL005W NAB3P38996 802 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SEC4YFL005W TDA10P42938 290 aa3.7□□□□□ -1.82
SEC4YFL005W PSP1P50896 841 aaKnown RBP3.7□□□□□ -1.82
SEC4YFL005W RRT6P53117 311 aaPredicted RBP3.7□□□□□ -1.82
SEC4YFL005W RAD33Q04231 177 aa3.7□□□□□ -1.82
SEC4YFL005W YMR018WQ04364 514 aa3.7□□□□□ -1.82
SEC4YFL005W SLK19Q08581 821 aaKnown RBP3.7□□□□□ -1.82
SEC4YFL005W PCL8Q08966 492 aa3.7□□□□□ -1.82
SEC4YFL005W AHA1Q12449 350 aaKnown RBP3.7□□□□□ -1.82
SEC4YFL005W PCD1Q12524 340 aa3.7□□□□□ -1.82
SEC4YFL005W HEM1P09950 548 aaPredicted RBP3.69□□□□□ -1.82
SEC4YFL005W RPC34P32910 317 aa3.69□□□□□ -1.82
SEC4YFL005W EXO1P39875 702 aa3.69□□□□□ -1.82
SEC4YFL005W YER010CP40011 234 aa3.69□□□□□ -1.82
SEC4YFL005W YIL161WP40449 235 aaKnown RBP3.69□□□□□ -1.82
SEC4YFL005W IST3P40565 148 aaPredicted RBP3.69□□□□□ -1.82
SEC4YFL005W COG1P53079 417 aa3.69□□□□□ -1.82
SEC4YFL005W VPS72Q03388 795 aa3.69□□□□□ -1.82
SEC4YFL005W YPL191CQ08930 360 aa3.69□□□□□ -1.82
SEC4YFL005W Q0010Q9ZZX9 128 aa3.69□□□□□ -1.82
SEC4YFL005W TY2A-LR1P0C2J4 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-FP0CX61 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-GR2P0CX62 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-CP25383 438 aa3.68□□□□□ -1.82
SEC4YFL005W LRE1P25579 583 aaKnown RBP3.68□□□□□ -1.82
SEC4YFL005W YJU2P28320 278 aaPredicted RBP3.68□□□□□ -1.82
SEC4YFL005W MCM10P32354 571 aa3.68□□□□□ -1.82
SEC4YFL005W CNS1P33313 385 aa3.68□□□□□ -1.82
SEC4YFL005W HES1P35843 434 aa3.68□□□□□ -1.82
SEC4YFL005W GEX2P36173 615 aa3.68□□□□□ -1.82
SEC4YFL005W VBA2P38358 474 aaKnown RBP3.68□□□□□ -1.82
SEC4YFL005W ERC1P38767 581 aa3.68□□□□□ -1.82
SEC4YFL005W AXL2P38928 823 aa3.68□□□□□ -1.82
SEC4YFL005W FUN12P39730 1002 aaKnown RBP3.68□□□□□ -1.82
SEC4YFL005W SAP1P39955 897 aaKnown RBP3.68□□□□□ -1.82
SEC4YFL005W DJP1P40564 432 aa3.68□□□□□ -1.82
SEC4YFL005W ASE1P50275 885 aa3.68□□□□□ -1.82
SEC4YFL005W YGR079WP53249 370 aa3.68□□□□□ -1.82
SEC4YFL005W YNL058CP53947 316 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-DR2Q03483 438 aa3.68□□□□□ -1.82
SEC4YFL005W PLM2Q04383 521 aa3.68□□□□□ -1.82
SEC4YFL005W YML053CQ04978 212 aa3.68□□□□□ -1.82
SEC4YFL005W HRD3Q05787 833 aa3.68□□□□□ -1.82
SEC4YFL005W SWT1Q12104 458 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-BQ12260 438 aa3.68□□□□□ -1.82
SEC4YFL005W PRS5Q12265 496 aaKnown RBP3.68□□□□□ -1.82
SEC4YFL005W TY2A-OR2Q12293 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-DR1Q12392 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-OR1Q12439 438 aa3.68□□□□□ -1.82
SEC4YFL005W TY2A-DR3Q99303 438 aa3.68□□□□□ -1.82
SEC4YFL005W YML003WP0CF16 290 aa3.67□□□□□ -1.82
SEC4YFL005W GUK1P15454 187 aaKnown RBP3.67□□□□□ -1.82
SEC4YFL005W RRP43P25359 394 aaPredicted RBP3.67□□□□□ -1.82
SEC4YFL005W CBF2P32504 956 aa3.67□□□□□ -1.82
SEC4YFL005W RIC1P40395 1056 aa3.67□□□□□ -1.82
SEC4YFL005W CIR1P42940 261 aa3.67□□□□□ -1.82
SEC4YFL005W NPA3P47122 385 aa3.67□□□□□ -1.82
SEC4YFL005W MEP3P53390 489 aa3.67□□□□□ -1.82
SEC4YFL005W CBK1P53894 756 aa3.67□□□□□ -1.82
SEC4YFL005W AAT1Q01802 451 aa3.67□□□□□ -1.82
SEC4YFL005W FMP30Q02883 468 aa3.67□□□□□ -1.82
SEC4YFL005W STP3Q05937 343 aa3.67□□□□□ -1.82
SEC4YFL005W BAG7Q12128 409 aa3.67□□□□□ -1.82
SEC4YFL005W ERG27Q12452 347 aaKnown RBP3.67□□□□□ -1.82
SEC4YFL005W COX1P00401 534 aa3.66□□□□□ -1.82
SEC4YFL005W SES1P07284 462 aaKnown RBP3.66□□□□□ -1.82
SEC4YFL005W AQY1P0CD91 305 aa3.66□□□□□ -1.82
SEC4YFL005W GFD2P25370 566 aaKnown RBP3.66□□□□□ -1.82
SEC4YFL005W KES1P35844 434 aaKnown RBP3.66□□□□□ -1.82
SEC4YFL005W UBX6P47049 396 aa3.66□□□□□ -1.82
SEC4YFL005W MSY1P48527 492 aa3.66□□□□□ -1.82
SEC4YFL005W YAT1P80235 687 aa3.66□□□□□ -1.82
SEC4YFL005W TMA64Q04600 565 aaKnown RBP3.66□□□□□ -1.82
SEC4YFL005W CYK3Q07533 885 aa3.66□□□□□ -1.82
SEC4YFL005W TMA16Q08687 178 aa3.66□□□□□ -1.82
SEC4YFL005W YOL087CQ99247 1116 aa3.66□□□□□ -1.82
SEC4YFL005W AI5_ALPHAQ9ZZX1 630 aa3.66□□□□□ -1.82
SEC4YFL005W SEC3P33332 1336 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms