RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C DHR2P36009 735 aaPredicted RBP3.3□□□□□ -1.88
MSH4YFL003C SUL1P38359 859 aa3.3□□□□□ -1.88
MSH4YFL003C REV7P38927 245 aa3.3□□□□□ -1.88
MSH4YFL003C LYS4P49367 693 aaPredicted RBP3.3□□□□□ -1.88
MSH4YFL003C SAP4P53036 818 aa3.3□□□□□ -1.88
MSH4YFL003C SPC19Q03954 165 aa3.3□□□□□ -1.88
MSH4YFL003C LAM4P38800 1345 aa3.3□□□□□ -1.88
MSH4YFL003C SEM1O94742 89 aa3.3□□□□□ -1.88
MSH4YFL003C PCT1P13259 424 aa3.3□□□□□ -1.88
MSH4YFL003C YIP4P53093 235 aa3.3□□□□□ -1.88
MSH4YFL003C TMA16Q08687 178 aa3.3□□□□□ -1.88
MSH4YFL003C CHD1P32657 1468 aa3.3□□□□□ -1.88
MSH4YFL003C TUB2P02557 457 aaKnown RBP3.29□□□□□ -1.88
MSH4YFL003C SEC15P22224 910 aa3.29□□□□□ -1.88
MSH4YFL003C YBR225WP38321 900 aa3.29□□□□□ -1.88
MSH4YFL003C SUN4P53616 420 aa3.29□□□□□ -1.88
MSH4YFL003C YDL242WQ07746 117 aa3.29□□□□□ -1.88
MSH4YFL003C ENT4Q07872 247 aa3.29□□□□□ -1.88
MSH4YFL003C RAD16P31244 790 aa3.29□□□□□ -1.88
MSH4YFL003C YMC2P38087 329 aa3.29□□□□□ -1.88
MSH4YFL003C CHS7P38843 316 aa3.29□□□□□ -1.88
MSH4YFL003C VTC2P43585 828 aa3.29□□□□□ -1.88
MSH4YFL003C IRC6P43615 237 aa3.29□□□□□ -1.88
MSH4YFL003C ATG4P53867 494 aa3.29□□□□□ -1.88
MSH4YFL003C REG1Q00816 1014 aa3.29□□□□□ -1.88
MSH4YFL003C ATG21Q02887 496 aa3.29□□□□□ -1.88
MSH4YFL003C YSH1Q06224 779 aaPredicted RBP3.29□□□□□ -1.88
MSH4YFL003C PCL8Q08966 492 aa3.29□□□□□ -1.88
MSH4YFL003C ATP2P00830 511 aaKnown RBP3.28□□□□□ -1.88
MSH4YFL003C EMP70P32802 667 aa3.28□□□□□ -1.88
MSH4YFL003C UBP7P40453 1071 aa3.28□□□□□ -1.88
MSH4YFL003C NPA3P47122 385 aa3.28□□□□□ -1.88
MSH4YFL003C SGM1P47166 707 aa3.28□□□□□ -1.88
MSH4YFL003C SPC98P53540 846 aa3.28□□□□□ -1.88
MSH4YFL003C NGL2Q03264 515 aaKnown RBP3.28□□□□□ -1.88
MSH4YFL003C YMR206WQ03695 313 aa3.28□□□□□ -1.88
MSH4YFL003C SPE4Q12455 300 aa3.28□□□□□ -1.88
MSH4YFL003C NTE1Q04958 1679 aa3.28□□□□□ -1.88
MSH4YFL003C SRP54P20424 541 aaKnown RBP3.28□□□□□ -1.88
MSH4YFL003C OPI1P21957 404 aa3.28□□□□□ -1.88
MSH4YFL003C TFC3P34111 1160 aa3.28□□□□□ -1.88
MSH4YFL003C UFO1Q04511 668 aa3.28□□□□□ -1.88
MSH4YFL003C MRI1Q06489 411 aaKnown RBP3.28□□□□□ -1.88
MSH4YFL003C GPN2Q08726 347 aaPredicted RBP3.28□□□□□ -1.88
MSH4YFL003C TAF3Q12297 353 aa3.28□□□□□ -1.88
MSH4YFL003C KGD2P19262 463 aaPredicted RBP3.27□□□□□ -1.89
MSH4YFL003C PMI40P29952 429 aaKnown RBP3.27□□□□□ -1.89
MSH4YFL003C NTH1P32356 751 aa3.27□□□□□ -1.89
MSH4YFL003C NUP120P35729 1037 aa3.27□□□□□ -1.89
MSH4YFL003C SWP82P43554 623 aa3.27□□□□□ -1.89
MSH4YFL003C DRS2P39524 1355 aa3.27□□□□□ -1.89
MSH4YFL003C MRP7P12687 371 aa3.27□□□□□ -1.89
MSH4YFL003C YPK1P12688 680 aaKnown RBP3.27□□□□□ -1.89
MSH4YFL003C YCK1P23291 538 aa3.27□□□□□ -1.89
MSH4YFL003C RFA2P26754 273 aaKnown RBP3.27□□□□□ -1.89
MSH4YFL003C UBP5P39944 805 aa3.27□□□□□ -1.89
MSH4YFL003C ZAP1P47043 880 aa3.27□□□□□ -1.89
MSH4YFL003C DUO1P53168 247 aaKnown RBP3.27□□□□□ -1.89
MSH4YFL003C UBP16Q02863 499 aa3.27□□□□□ -1.89
MSH4YFL003C MUB1Q03162 620 aa3.27□□□□□ -1.89
MSH4YFL003C TRS23Q03784 219 aa3.27□□□□□ -1.89
MSH4YFL003C RAD33Q04231 177 aa3.27□□□□□ -1.89
MSH4YFL003C GRC3Q07845 632 aa3.27□□□□□ -1.89
MSH4YFL003C ESC8Q08119 714 aa3.27□□□□□ -1.89
MSH4YFL003C AIM39Q08223 395 aa3.27□□□□□ -1.89
MSH4YFL003C ENT1Q12518 454 aa3.27□□□□□ -1.89
MSH4YFL003C TPK1P06244 397 aa3.26□□□□□ -1.89
MSH4YFL003C CCL1P37366 393 aa3.26□□□□□ -1.89
MSH4YFL003C UBP13P38187 747 aa3.26□□□□□ -1.89
MSH4YFL003C YJR061WP40355 935 aa3.26□□□□□ -1.89
MSH4YFL003C IDS2P46958 469 aa3.26□□□□□ -1.89
MSH4YFL003C YGL117WP53133 265 aa3.26□□□□□ -1.89
MSH4YFL003C YGL036WP53185 909 aaPredicted RBP3.26□□□□□ -1.89
MSH4YFL003C GSF2Q04697 403 aaKnown RBP3.26□□□□□ -1.89
MSH4YFL003C RCO1Q04779 684 aa3.26□□□□□ -1.89
MSH4YFL003C GTB1Q04924 702 aa3.26□□□□□ -1.89
MSH4YFL003C UTP21Q06078 939 aaPredicted RBP3.26□□□□□ -1.89
MSH4YFL003C YBR255C-AQ3E776 120 aa3.26□□□□□ -1.89
MSH4YFL003C HOM3P10869 527 aa3.26□□□□□ -1.89
MSH4YFL003C LRE1P25579 583 aaKnown RBP3.26□□□□□ -1.89
MSH4YFL003C SWI3P32591 825 aa3.26□□□□□ -1.89
MSH4YFL003C GDA1P32621 518 aa3.26□□□□□ -1.89
MSH4YFL003C RPS0AP32905 252 aaKnown RBP3.26□□□□□ -1.89
MSH4YFL003C TEF4P36008 412 aaKnown RBP3.26□□□□□ -1.89
MSH4YFL003C FAF1P40546 346 aaPredicted RBP3.26□□□□□ -1.89
MSH4YFL003C MRX6P48564 524 aa3.26□□□□□ -1.89
MSH4YFL003C VPS4P52917 437 aa3.26□□□□□ -1.89
MSH4YFL003C BSC5P53755 489 aa3.26□□□□□ -1.89
MSH4YFL003C RAD30Q04049 632 aa3.26□□□□□ -1.89
MSH4YFL003C HRD3Q05787 833 aa3.26□□□□□ -1.89
MSH4YFL003C YOL159CQ08300 171 aa3.26□□□□□ -1.89
MSH4YFL003C NMD4Q12129 218 aa3.26□□□□□ -1.89
MSH4YFL003C LCB4Q12246 624 aa3.26□□□□□ -1.89
MSH4YFL003C SCM3Q12334 223 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-LR1P0C2J3 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-FP0CX63 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-GR2P0CX64 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-CP25384 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-DR2Q03494 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY1B-DR1Q03855 1755 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms