RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX29	YDR479C	CLN2	P20438	545 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	CLB3	P24870	427 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	SNT1	P25357	1226 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	CAP1	P28495	268 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	PRR1	P28708	518 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	TFC1	P32367	649 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	PRP19	P32523	503 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	PAM1	P37304	830 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	NCL1	P38205	684 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	AIM46	P38885	310 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	RRP8	P38961	392 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	STT3	P39007	718 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	CCT6	P39079	546 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	FRT2	P39734	528 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	UBP5	P39944	805 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	UBP7	P40453	1071 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	CSM2	P40465	213 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YJL107C	P42947	387 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	IRC8	P47046	822 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YGR153W	P48238	217 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	IPI3	P53877	555 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	RPS15	Q01855	142 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	SKI8	Q02793	397 aa	Predicted RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	YMR027W	Q04371	470 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	SVF1	Q05515	481 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	BRE4	Q07660	1125 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YLR031W	Q07978	186 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	MCH5	Q08777	521 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YLR053C	Q12026	108 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	RRI2	Q12348	645 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	MRP13	P12686	339 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	RNR3	P21672	869 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	SAN1	P22470	610 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	VPS34	P22543	875 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	PEX1	P24004	1043 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	CMK1	P27466	446 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	CRM1	P30822	1084 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	DOM34	P33309	386 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YPK3	P38070	525 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	YBR285W	P38354	144 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	HIS2	P38635	335 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	LSM12	P38828	187 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	SPL2	P38839	148 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	UTP9	P38882	575 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	XKS1	P42826	600 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	MNN11	P46985	422 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	IML2	P47031	731 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	BIR1	P47134	954 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	MSE1	P48525	536 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	HOS2	P53096	452 aa	Predicted RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	MPS2	P53159	387 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	PRO2	P54885	456 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	DYN3	Q04949	312 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	ADY4	Q05955	493 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	SPE3	Q12074	293 aa	Known RBP	4.8	□□□□□ -1.64
PEX29	YDR479C	YDL109C	Q12103	647 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	ARP6	Q12509	438 aa		4.8	□□□□□ -1.64
PEX29	YDR479C	FKS3	Q04952	1785 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	ATP2	P00830	511 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	CDC31	P06704	161 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	RED1	P14291	827 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
PEX29	YDR479C	VPS3	P23643	1011 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	GFD2	P25370	566 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	MEI4	P29467	408 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	TPS2	P31688	896 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	ANP1	P32629	500 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	SSO1	P32867	290 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	UTP30	P36144	274 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	CCL1	P37366	393 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	YRO2	P38079	344 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	YER156C	P40093	338 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	YFH7	P43591	353 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	IOC3	P43596	787 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	SSN8	P47821	323 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	COG2	P53271	262 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	UTP8	P53276	713 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	YTP1	P53584	459 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	REX2	P54964	269 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	BSC2	Q05611	235 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	YLR257W	Q06146	321 aa	Known RBP	4.79	□□□□□ -1.64
PEX29	YDR479C	ARR2	Q06597	130 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	SGT1	Q08446	395 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	VPS54	Q12071	889 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	ACF2	Q12168	779 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	YOR342C	Q12182	319 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	HSP42	Q12329	375 aa		4.79	□□□□□ -1.64
PEX29	YDR479C	SNF4	P12904	322 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	ISY1	P21374	235 aa	Predicted RBP	4.78	□□□□□ -1.64
PEX29	YDR479C	PEX3	P28795	441 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	PTP2	P29461	750 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	YSC84	P32793	468 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	YKL063C	P35725	167 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	STB6	P36085	766 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	MTG2	P38860	518 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	YER137C	P40083	148 aa	Known RBP	4.78	□□□□□ -1.64
PEX29	YDR479C	YJL181W	P46987	611 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	DIE2	P50076	525 aa		4.78	□□□□□ -1.64
PEX29	YDR479C	NUP84	P52891	726 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms