RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	OCA6	Q12454	224 aa		12.9	□□□□□ -0.34
NPL3	YDR432W	YOR338W	Q99326	363 aa		12.9	□□□□□ -0.34
NPL3	YDR432W	PMS1	P14242	873 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	AIM26	P32858	118 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	MRS6	P32864	603 aa	Known RBP	12.89	□□□□□ -0.35
NPL3	YDR432W	PDR3	P33200	976 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	ALY1	P36117	915 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	RRT2	P38332	387 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	MSR1	P38714	643 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	UME6	P39001	836 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	ATM1	P40416	690 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	BOP3	P53958	396 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	NAM8	Q00539	523 aa	Known RBP	12.89	□□□□□ -0.35
NPL3	YDR432W	YDR131C	Q03899	556 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	UFO1	Q04511	668 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	VAC14	Q06708	880 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	AAD15	Q08361	143 aa		12.89	□□□□□ -0.35
NPL3	YDR432W	CIN8	P27895	1000 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	BRF1	P29056	596 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	SRB4	P32569	687 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	STS1	P38637	319 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	OTU2	P38747	307 aa	Known RBP	12.88	□□□□□ -0.35
NPL3	YDR432W	YER158C	P40095	573 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	SET2	P46995	733 aa	Known RBP	12.88	□□□□□ -0.35
NPL3	YDR432W	ATG10	Q07879	167 aa		12.88	□□□□□ -0.35
NPL3	YDR432W	SBP1	P10080	294 aa	Known RBP	12.87	□□□□□ -0.35
NPL3	YDR432W	YCR015C	P25616	317 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	PCA1	P38360	1216 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	LRP1	P38801	184 aa	Known RBP	12.87	□□□□□ -0.35
NPL3	YDR432W	ARG2	P40360	574 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	BRO1	P48582	844 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	NBP35	P52920	328 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	KAP114	P53067	1004 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	SML1	Q04964	104 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	YLR456W	Q06199	204 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	ESC2	Q06340	456 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	THI73	Q07904	523 aa		12.87	□□□□□ -0.35
NPL3	YDR432W	TUB3	P09734	445 aa	Known RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	YKR104W	P0CE69	306 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	RDS2	P19541	446 aa	Known RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	CKI1	P20485	582 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	YBL055C	P34220	418 aa	Predicted RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	UBP14	P38237	781 aa	Known RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	PPE1	P38796	400 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	ELO3	P40319	345 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	YIL108W	P40483	696 aa	Known RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	BUD13	P46947	266 aa	Predicted RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	BTN2	P53286	410 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	YMR114C	Q04471	368 aa	Known RBP	12.86	□□□□□ -0.35
NPL3	YDR432W	LDB18	Q07887	179 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	MCM16	Q12262	181 aa		12.86	□□□□□ -0.35
NPL3	YDR432W	COX5A	P00424	153 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	RPL1A	P0CX43	217 aa	Known RBP	12.85	□□□□□ -0.35
NPL3	YDR432W	RPL1B	P0CX44	217 aa	Known RBP	12.85	□□□□□ -0.35
NPL3	YDR432W	SLY1	P22213	666 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	SFP1	P32432	683 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	RAD5	P32849	1169 aa	Predicted RBP	12.85	□□□□□ -0.35
NPL3	YDR432W	FLC2	P39719	783 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	MND2	P40577	368 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	STR3	P53101	465 aa	Known RBP	12.85	□□□□□ -0.35
NPL3	YDR432W	YNL143C	P53908	130 aa		12.85	□□□□□ -0.35
NPL3	YDR432W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	12.85	□□□□□ -0.35	not detected
NPL3	YDR432W	INH1	P01097	85 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	12.84	□□□□□ -0.35	not detected
NPL3	YDR432W	SNT1	P25357	1226 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	SCD5	P34758	872 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	YBR238C	P38330	731 aa	Known RBP	12.84	□□□□□ -0.35
NPL3	YDR432W	MKT1	P40850	830 aa	Known RBP	12.84	□□□□□ -0.35
NPL3	YDR432W	TEP1	P53916	434 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	MSH6	Q03834	1242 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	YML096W	Q04489	525 aa		12.84	□□□□□ -0.35
NPL3	YDR432W	RBK1	P25332	333 aa		12.83	□□□□□ -0.36
NPL3	YDR432W	DIA4	P38705	446 aa	Predicted RBP	12.83	□□□□□ -0.36
NPL3	YDR432W	PCL10	P53124	433 aa		12.83	□□□□□ -0.36
NPL3	YDR432W	BNA5	Q05979	453 aa		12.83	□□□□□ -0.36
NPL3	YDR432W	RKM5	Q12367	367 aa		12.83	□□□□□ -0.36
NPL3	YDR432W	SFL1	P20134	766 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	PAP1	P29468	568 aa	Known RBP	12.82	□□□□□ -0.36
NPL3	YDR432W	WBP1	P33767	430 aa	Known RBP	12.82	□□□□□ -0.36
NPL3	YDR432W	SRP72	P38688	640 aa	Known RBP	12.82	□□□□□ -0.36
NPL3	YDR432W	SAW1	P39735	261 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	NDC80	P40460	691 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	NRM1	P53718	249 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	VAC7	P53950	1165 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	TGL2	P54857	326 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	RSC4	Q02206	625 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	NRT1	Q08485	598 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	TFB4	Q12004	338 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	YLL056C	Q12177	298 aa		12.82	□□□□□ -0.36
NPL3	YDR432W	TFA2	P36145	328 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	ECM2	P38241	364 aa	Known RBP	12.81	□□□□□ -0.36
NPL3	YDR432W	RCK2	P38623	610 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	SMF1	P38925	575 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	STN1	P38960	494 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	CCT6	P39079	546 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	ELO1	P39540	310 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	RPH1	P39956	796 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	RPL34B	P40525	121 aa	Known RBP	12.81	□□□□□ -0.36
NPL3	YDR432W	SWC4	P53201	476 aa		12.81	□□□□□ -0.36
NPL3	YDR432W	TIM13	P53299	105 aa		12.81	□□□□□ -0.36

Retrieved 100 of 5,963 RNA–protein pairs in 834.3 ms