RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C LSB1P53281 241 aa4.51□□□□□ -1.69
CDC9YDL164C LSC2P53312 427 aa4.51□□□□□ -1.69
CDC9YDL164C VTC3Q02725 835 aa4.51□□□□□ -1.69
CDC9YDL164C TRS31Q03337 283 aa4.51□□□□□ -1.69
CDC9YDL164C EFR3Q03653 782 aaKnown RBP4.51□□□□□ -1.69
CDC9YDL164C SPH1Q06160 661 aa4.51□□□□□ -1.69
CDC9YDL164C APL4Q12028 832 aa4.51□□□□□ -1.69
CDC9YDL164C UPC2Q12151 913 aa4.51□□□□□ -1.69
CDC9YDL164C YPT6Q99260 215 aa4.51□□□□□ -1.69
CDC9YDL164C HMG2P12684 1045 aa4.5□□□□□ -1.69
CDC9YDL164C FRS1P15624 595 aaKnown RBP4.5□□□□□ -1.69
CDC9YDL164C WHI3P34761 661 aaKnown RBP4.5□□□□□ -1.69
CDC9YDL164C SER3P40054 469 aa4.5□□□□□ -1.69
CDC9YDL164C ATF1P40353 525 aa4.5□□□□□ -1.69
CDC9YDL164C RRT14P40470 206 aa4.5□□□□□ -1.69
CDC9YDL164C EXG2P52911 562 aa4.5□□□□□ -1.69
CDC9YDL164C RCN2Q12044 265 aa4.5□□□□□ -1.69
CDC9YDL164C YLR358CO13565 187 aa4.49□□□□□ -1.69
CDC9YDL164C CTT1P06115 562 aa4.49□□□□□ -1.69
CDC9YDL164C ERG6P25087 383 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C BFR1P38934 470 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
CDC9YDL164C CAB2P40506 365 aa4.49□□□□□ -1.69
CDC9YDL164C PKP1P40530 394 aa4.49□□□□□ -1.69
CDC9YDL164C LAM5P43560 674 aa4.49□□□□□ -1.69
CDC9YDL164C VPS4P52917 437 aa4.49□□□□□ -1.69
CDC9YDL164C EOS1P53938 366 aa4.49□□□□□ -1.69
CDC9YDL164C GAD1Q04792 585 aa4.49□□□□□ -1.69
CDC9YDL164C BUD7Q08754 746 aa4.49□□□□□ -1.69
CDC9YDL164C TY3A-GQ12173 290 aa4.49□□□□□ -1.69
CDC9YDL164C SVS1Q12254 260 aa4.49□□□□□ -1.69
CDC9YDL164C TY3A-IQ99219 290 aa4.49□□□□□ -1.69
CDC9YDL164C AFI1Q99222 893 aa4.49□□□□□ -1.69
CDC9YDL164C YLR302CO13544 120 aa4.49□□□□□ -1.69
CDC9YDL164C MRPL25P23369 157 aa4.49□□□□□ -1.69
CDC9YDL164C PEP3P27801 918 aa4.49□□□□□ -1.69
CDC9YDL164C RME1P32338 300 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C LRG1P35688 1017 aa4.49□□□□□ -1.69
CDC9YDL164C APE3P37302 537 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C ARB1P40024 610 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C RAI1P53063 387 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C ECM18Q04623 453 aa4.49□□□□□ -1.69
CDC9YDL164C KAP95Q06142 861 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C MCP2Q06567 569 aa4.49□□□□□ -1.69
CDC9YDL164C DIB1Q06819 143 aaPredicted RBP4.49□□□□□ -1.69
CDC9YDL164C PUS7Q08647 676 aaKnown RBP4.49□□□□□ -1.69
CDC9YDL164C RPS7AP26786 190 aaKnown RBP4.48□□□□□ -1.69
CDC9YDL164C BUD14P27637 709 aa4.48□□□□□ -1.69
CDC9YDL164C YDR089WP38966 869 aa4.48□□□□□ -1.69
CDC9YDL164C FTR1P40088 404 aa4.48□□□□□ -1.69
CDC9YDL164C SLZ1P40167 298 aa4.48□□□□□ -1.69
CDC9YDL164C IST3P40565 148 aaPredicted RBP4.48□□□□□ -1.69
CDC9YDL164C MKT1P40850 830 aaKnown RBP4.48□□□□□ -1.69
CDC9YDL164C SSY5P47002 699 aa4.48□□□□□ -1.69
CDC9YDL164C BIT61P47041 543 aa4.48□□□□□ -1.69
CDC9YDL164C TAH11P47112 604 aa4.48□□□□□ -1.69
CDC9YDL164C NUP84P52891 726 aa4.48□□□□□ -1.69
CDC9YDL164C ORC4P54791 529 aa4.48□□□□□ -1.69
CDC9YDL164C UBP2Q01476 1272 aa4.48□□□□□ -1.69
CDC9YDL164C DOT1Q04089 582 aaKnown RBP4.48□□□□□ -1.69
CDC9YDL164C GIS4Q04233 774 aa4.48□□□□□ -1.69
CDC9YDL164C MSC3Q05812 728 aa4.48□□□□□ -1.69
CDC9YDL164C OPT2Q06593 877 aa4.48□□□□□ -1.69
CDC9YDL164C CDA1Q06702 301 aa4.48□□□□□ -1.69
CDC9YDL164C PEX19Q07418 342 aa4.48□□□□□ -1.69
CDC9YDL164C YEH1Q07804 573 aa4.48□□□□□ -1.69
CDC9YDL164C YPL277CQ08989 487 aa4.48□□□□□ -1.69
CDC9YDL164C COY1P34237 679 aa4.48□□□□□ -1.69
CDC9YDL164C AUR1P36107 401 aaPredicted RBP4.48□□□□□ -1.69
CDC9YDL164C DAD2P36162 133 aa4.48□□□□□ -1.69
CDC9YDL164C DOT5P40553 215 aa4.48□□□□□ -1.69
CDC9YDL164C SSU1P41930 458 aa4.48□□□□□ -1.69
CDC9YDL164C EFM3P47163 339 aa4.48□□□□□ -1.69
CDC9YDL164C FMS1P50264 508 aa4.48□□□□□ -1.69
CDC9YDL164C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
CDC9YDL164C RTC5Q12108 567 aaKnown RBP4.48□□□□□ -1.69
CDC9YDL164C SFG1Q12507 346 aa4.48□□□□□ -1.69
CDC9YDL164C LPD1P09624 499 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C PWP1P21304 576 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C DIT1P21623 536 aa4.47□□□□□ -1.69
CDC9YDL164C MSP1P28737 362 aa4.47□□□□□ -1.69
CDC9YDL164C SWH1P35845 1188 aa4.47□□□□□ -1.69
CDC9YDL164C NNK1P36003 928 aa4.47□□□□□ -1.69
CDC9YDL164C YKR075CP36155 307 aa4.47□□□□□ -1.69
CDC9YDL164C RFC3P38629 340 aa4.47□□□□□ -1.69
CDC9YDL164C OSH7P38755 437 aa4.47□□□□□ -1.69
CDC9YDL164C YIL108WP40483 696 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C ECM27P47144 725 aa4.47□□□□□ -1.69
CDC9YDL164C GCV2P49095 1034 aa4.47□□□□□ -1.69
CDC9YDL164C COS12P53053 380 aa4.47□□□□□ -1.69
CDC9YDL164C SQS1P53866 767 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C RRN5Q02983 363 aa4.47□□□□□ -1.69
CDC9YDL164C MUS81Q04149 632 aaPredicted RBP4.47□□□□□ -1.69
CDC9YDL164C PRS5Q12265 496 aaKnown RBP4.47□□□□□ -1.69
CDC9YDL164C LOT5P34234 306 aa4.47□□□□□ -1.69
CDC9YDL164C NTC20P38302 140 aaPredicted RBP4.47□□□□□ -1.69
CDC9YDL164C RRT2P38332 387 aa4.47□□□□□ -1.69
CDC9YDL164C ELO3P40319 345 aa4.47□□□□□ -1.69
CDC9YDL164C LRO1P40345 661 aa4.47□□□□□ -1.69
CDC9YDL164C MET12P46151 657 aa4.47□□□□□ -1.69
CDC9YDL164C TNA1P53322 534 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms