RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C RPN2P32565 945 aaKnown RBP5.9□□□□□ -1.46
MDH3YDL078C TFC3P34111 1160 aa5.9□□□□□ -1.46
MDH3YDL078C HSM3P38348 480 aa5.9□□□□□ -1.46
MDH3YDL078C FSH1P38777 243 aaKnown RBP5.9□□□□□ -1.46
MDH3YDL078C SSZ1P38788 538 aaKnown RBP5.9□□□□□ -1.46
MDH3YDL078C PMC1P38929 1173 aaPredicted RBP5.9□□□□□ -1.46
MDH3YDL078C DUN1P39009 513 aa5.9□□□□□ -1.46
MDH3YDL078C ERP2P39704 215 aa5.9□□□□□ -1.46
MDH3YDL078C EXO1P39875 702 aa5.9□□□□□ -1.46
MDH3YDL078C VAC8P39968 578 aa5.9□□□□□ -1.46
MDH3YDL078C FLC3P53121 802 aa5.9□□□□□ -1.46
MDH3YDL078C NMA2P53204 395 aa5.9□□□□□ -1.46
MDH3YDL078C RTS3P53289 263 aa5.9□□□□□ -1.46
MDH3YDL078C TRM112P53738 135 aaPredicted RBP5.9□□□□□ -1.46
MDH3YDL078C CAF120P53836 1060 aa5.9□□□□□ -1.46
MDH3YDL078C CDC55Q00362 526 aa5.9□□□□□ -1.46
MDH3YDL078C ELP3Q02908 557 aaKnown RBP5.9□□□□□ -1.46
MDH3YDL078C ATG16Q03818 150 aa5.9□□□□□ -1.46
MDH3YDL078C IVY1Q04934 453 aa5.9□□□□□ -1.46
MDH3YDL078C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
MDH3YDL078C FRA1Q07825 749 aa5.9□□□□□ -1.46
MDH3YDL078C CLP1Q08685 445 aaPredicted RBP5.9□□□□□ -1.46
MDH3YDL078C APL4Q12028 832 aa5.9□□□□□ -1.46
MDH3YDL078C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
MDH3YDL078C RUD3Q12234 484 aaKnown RBP5.9□□□□□ -1.46
MDH3YDL078C HIS1P00498 297 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C CDC31P06704 161 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C PYC1P11154 1178 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C MET16P18408 261 aaPredicted RBP5.89□□□□□ -1.47
MDH3YDL078C ARF2P19146 181 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C CLB4P24871 460 aa5.89□□□□□ -1.47
MDH3YDL078C TYE7P33122 291 aaPredicted RBP5.89□□□□□ -1.47
MDH3YDL078C FUI1P38196 639 aa5.89□□□□□ -1.47
MDH3YDL078C URA8P38627 578 aaPredicted RBP5.89□□□□□ -1.47
MDH3YDL078C HIS2P38635 335 aa5.89□□□□□ -1.47
MDH3YDL078C CRP1P38845 465 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C LIN1P38852 340 aaPredicted RBP5.89□□□□□ -1.47
MDH3YDL078C SET5P38890 526 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C EDC3P39998 551 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C ASG1P40467 964 aa5.89□□□□□ -1.47
MDH3YDL078C TY4A-JP47023 414 aa5.89□□□□□ -1.47
MDH3YDL078C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
MDH3YDL078C PYK2P52489 506 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C ALF1P53904 254 aa5.89□□□□□ -1.47
MDH3YDL078C MEH1Q02205 184 aa5.89□□□□□ -1.47
MDH3YDL078C ARA2Q04212 335 aa5.89□□□□□ -1.47
MDH3YDL078C POB3Q04636 552 aaKnown RBP5.89□□□□□ -1.47
MDH3YDL078C GRX8Q05926 109 aa5.89□□□□□ -1.47
MDH3YDL078C YCS4Q06156 1176 aa5.89□□□□□ -1.47
MDH3YDL078C NDD1Q08887 554 aa5.89□□□□□ -1.47
MDH3YDL078C MSF1P08425 469 aa5.88□□□□□ -1.47
MDH3YDL078C TAL1P15019 335 aaKnown RBP5.88□□□□□ -1.47
MDH3YDL078C SEC23P15303 768 aaKnown RBP5.88□□□□□ -1.47
MDH3YDL078C RRP43P25359 394 aaPredicted RBP5.88□□□□□ -1.47
MDH3YDL078C ADY2P25613 283 aa5.88□□□□□ -1.47
MDH3YDL078C HXT1P32465 570 aa5.88□□□□□ -1.47
MDH3YDL078C STE13P33894 931 aa5.88□□□□□ -1.47
MDH3YDL078C KHA1P40309 873 aa5.88□□□□□ -1.47
MDH3YDL078C MET18P40469 1032 aa5.88□□□□□ -1.47
MDH3YDL078C YIR007WP40566 764 aa5.88□□□□□ -1.47
MDH3YDL078C EMW1P42842 904 aaKnown RBP5.88□□□□□ -1.47
MDH3YDL078C CNN1P43618 361 aa5.88□□□□□ -1.47
MDH3YDL078C KEL2P50090 882 aa5.88□□□□□ -1.47
MDH3YDL078C ORM1P53224 222 aa5.88□□□□□ -1.47
MDH3YDL078C CWC24P53769 259 aa5.88□□□□□ -1.47
MDH3YDL078C YNL040WP53960 456 aaPredicted RBP5.88□□□□□ -1.47
MDH3YDL078C YML108WQ03759 105 aa5.88□□□□□ -1.47
MDH3YDL078C SOV1Q04748 898 aa5.88□□□□□ -1.47
MDH3YDL078C HEL2Q05580 639 aaKnown RBP5.88□□□□□ -1.47
MDH3YDL078C SPO21Q12411 609 aa5.88□□□□□ -1.47
MDH3YDL078C PET494P07390 489 aaPredicted RBP5.87□□□□□ -1.47
MDH3YDL078C MIS1P09440 975 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C ERG11P10614 530 aa5.87□□□□□ -1.47
MDH3YDL078C HMG1P12683 1054 aa5.87□□□□□ -1.47
MDH3YDL078C SEC66P33754 206 aa5.87□□□□□ -1.47
MDH3YDL078C NUP120P35729 1037 aa5.87□□□□□ -1.47
MDH3YDL078C SRL3P36167 246 aa5.87□□□□□ -1.47
MDH3YDL078C MRPL40P36534 297 aa5.87□□□□□ -1.47
MDH3YDL078C KAP104P38217 918 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C RRT2P38332 387 aa5.87□□□□□ -1.47
MDH3YDL078C GDH3P39708 457 aa5.87□□□□□ -1.47
MDH3YDL078C GCN20P43535 752 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C SNG1P46950 547 aa5.87□□□□□ -1.47
MDH3YDL078C CTK3P46963 296 aaPredicted RBP5.87□□□□□ -1.47
MDH3YDL078C MNN11P46985 422 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C NUP84P52891 726 aa5.87□□□□□ -1.47
MDH3YDL078C VEL1P53058 206 aa5.87□□□□□ -1.47
MDH3YDL078C KAP114P53067 1004 aa5.87□□□□□ -1.47
MDH3YDL078C NOG2P53742 486 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C BET4Q00618 327 aa5.87□□□□□ -1.47
MDH3YDL078C INA17Q02888 182 aa5.87□□□□□ -1.47
MDH3YDL078C NGL3Q03210 505 aa5.87□□□□□ -1.47
MDH3YDL078C RPN4Q03465 531 aa5.87□□□□□ -1.47
MDH3YDL078C ADI1Q03677 179 aa5.87□□□□□ -1.47
MDH3YDL078C KAP95Q06142 861 aaKnown RBP5.87□□□□□ -1.47
MDH3YDL078C TPO1Q07824 586 aa5.87□□□□□ -1.47
MDH3YDL078C MSB2P32334 1306 aa5.87□□□□□ -1.47
MDH3YDL078C CAN1P04817 590 aa5.86□□□□□ -1.47
MDH3YDL078C PMS1P14242 873 aa5.86□□□□□ -1.47
MDH3YDL078C RAD57P25301 460 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms