RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	ENT4	Q07872	247 aa		4.63	□□□□□ -1.67
RTK1	YDL025C	TUB2	P02557	457 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	GCN4	P03069	281 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	MET3	P08536	511 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	SUI3	P09064	285 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	RED1	P14291	827 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	CKA1	P15790	372 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	PSD1	P39006	500 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	RMD8	P43620	662 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	TAM41	P53230	385 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	CSL4	P53859	292 aa	Predicted RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	YSA1	Q01976	231 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	YPL071C	Q02864	156 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	SXM1	Q04175	944 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	ARP9	Q05123	467 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	TMA16	Q08687	178 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	ULS1	Q08562	1619 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	RPS13	P05756	151 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	RPL19A	P0CX82	189 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	RPL19B	P0CX83	189 aa	Predicted RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	PRE8	P23639	250 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	NTH1	P32356	751 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	YBL029W	P38201	376 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	INP52	P50942	1183 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	RCO1	Q04779	684 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	STP3	Q05937	343 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	ENB1	Q08299	606 aa		4.62	□□□□□ -1.67
RTK1	YDL025C	ERG27	Q12452	347 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	PNO1	Q99216	274 aa	Known RBP	4.62	□□□□□ -1.67
RTK1	YDL025C	ARG3	P05150	338 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	MET17	P06106	444 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	ERG8	P24521	451 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	PEP3	P27801	918 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	HIS7	P33734	552 aa	Known RBP	4.61	□□□□□ -1.67
RTK1	YDL025C	BYE1	P36106	594 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	YBR053C	P38235	358 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	MPS3	P47069	682 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	RAD30	Q04049	632 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	NUS1	Q12063	375 aa		4.61	□□□□□ -1.67
RTK1	YDL025C	RPB2	P08518	1224 aa	Known RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	MSS1	P32559	526 aa	Predicted RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	MTH1	P35198	433 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	KTR3	P38130	404 aa	Predicted RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	REV7	P38927	245 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	FMP10	P40098	244 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	ELO3	P40319	345 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	ASE1	P50275	885 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	VPS4	P52917	437 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	CRF1	Q04930	467 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	GDB1	Q06625	1536 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	TRP4	P07285	380 aa	Predicted RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	VPS34	P22543	875 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	YCK1	P23291	538 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	NPL6	P32832	435 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RTK1	YDL025C	UBC11	P52492	156 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	PAN2	P53010	1115 aa	Predicted RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	DSD1	P53095	428 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	MTG1	Q03151	367 aa	Predicted RBP	4.6	□□□□□ -1.67
RTK1	YDL025C	LAS17	Q12446	633 aa		4.6	□□□□□ -1.67
RTK1	YDL025C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RTK1	YDL025C	CDC60	P26637	1090 aa	Known RBP	4.59	□□□□□ -1.67
RTK1	YDL025C	LST4	P34239	828 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	YIL161W	P40449	235 aa	Known RBP	4.59	□□□□□ -1.67
RTK1	YDL025C	VPS75	P53853	264 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	ERO1	Q03103	563 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	YMR155W	Q03795	547 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	TMA10	Q06177	86 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	IZH3	Q07959	543 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	IRC13	Q08630	104 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	LYS21	Q12122	440 aa	Known RBP	4.59	□□□□□ -1.67
RTK1	YDL025C	SMC6	Q12749	1114 aa		4.59	□□□□□ -1.67
RTK1	YDL025C	TSC11	P40061	1430 aa		4.59	□□□□□ -1.68
RTK1	YDL025C	CAP1	P28495	268 aa	Known RBP	4.58	□□□□□ -1.68
RTK1	YDL025C	ELF1	P36053	145 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	ALY1	P36117	915 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	CTP1	P38152	299 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	TDP1	P38319	544 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	PFK26	P40433	827 aa	Known RBP	4.58	□□□□□ -1.68
RTK1	YDL025C	MRX6	P48564	524 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	EFR3	Q03653	782 aa	Known RBP	4.58	□□□□□ -1.68
RTK1	YDL025C	CTI6	Q08923	506 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	SFI1	Q12369	946 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	YCR061W	P25639	631 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	DBF4	P32325	704 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	PHO11	P35842	467 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	MRPL7	P36519	292 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	AIM3	P38266	947 aa	Known RBP	4.58	□□□□□ -1.68
RTK1	YDL025C	SRP72	P38688	640 aa	Known RBP	4.58	□□□□□ -1.68
RTK1	YDL025C	PHO12	P38693	467 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	SPO22	P40511	975 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	RCN2	Q12044	265 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	YKL033W-A	Q86ZR7	236 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	VCX1	Q99385	411 aa		4.58	□□□□□ -1.68
RTK1	YDL025C	PDR10	P51533	1564 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	FUB1	P25659	250 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	URK1	P27515	501 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	LNP1	P38878	278 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	RTS1	P38903	757 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	UBP7	P40453	1071 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms