RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	YOR338W	Q99326	363 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	IZH4	Q99393	312 aa		4.62	□□□□□ -1.67
SAF1	YBR280C	TRA1	P38811	3744 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	TUB1	P09733	447 aa	Known RBP	4.61	□□□□□ -1.67
SAF1	YBR280C	SEC65	P29478	273 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	HXT3	P32466	567 aa	Known RBP	4.61	□□□□□ -1.67
SAF1	YBR280C	SPR1	P32603	445 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	MRS6	P32864	603 aa	Known RBP	4.61	□□□□□ -1.67
SAF1	YBR280C	SCD5	P34758	872 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	CEM1	P39525	442 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	ERP2	P39704	215 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	ATM1	P40416	690 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	CFD1	P40558	293 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	HXT16	P47185	567 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	YGR127W	P53275	312 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	TIM13	P53299	105 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	HXT15	P54854	567 aa		4.61	□□□□□ -1.67
SAF1	YBR280C	YPR089W	O13585	888 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	GLN4	P13188	809 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	PTP1	P25044	335 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	NCL1	P38205	684 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	KHA1	P40309	873 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	ZIM17	P42844	174 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	ROK1	P45818	564 aa	Predicted RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	PCL10	P53124	433 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	EGD1	Q02642	157 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	RSM10	Q03201	203 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	MSH6	Q03834	1242 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	YMR018W	Q04364	514 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	ERV41	Q04651	352 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	TRM8	Q12009	286 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	VPS68	Q12016	184 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	AIM44	Q99299	758 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	GAL11	P19659	1081 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	UBA1	P22515	1024 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	MIC60	P36112	540 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	AIM18	P38884	321 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	SMF1	P38925	575 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	CCT6	P39079	546 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	MKT1	P40850	830 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	MVP1	P40959	511 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	YNL247W	P53852	767 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	SUR7	P54003	302 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	VPS9	P54787	451 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SAF1	YBR280C	UME1	Q03010	460 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	TPO1	Q07824	586 aa		4.6	□□□□□ -1.67
SAF1	YBR280C	LSP1	Q12230	341 aa	Known RBP	4.6	□□□□□ -1.67
SAF1	YBR280C	COX5A	P00424	153 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	SCL1	P21243	252 aa	Known RBP	4.59	□□□□□ -1.67
SAF1	YBR280C	MCM2	P29469	868 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	TFA2	P36145	328 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	PIM1	P36775	1133 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	YAL037W	P39728	267 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	VFA1	P40080	203 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	IST3	P40565	148 aa	Predicted RBP	4.59	□□□□□ -1.67
SAF1	YBR280C	YGL108C	P53139	140 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	TGL2	P54857	326 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	ENT5	Q03769	411 aa	Known RBP	4.59	□□□□□ -1.67
SAF1	YBR280C	VHS1	Q03785	461 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	YLR287C	Q05881	355 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	STP3	Q05937	343 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	FRE7	Q12333	620 aa		4.59	□□□□□ -1.67
SAF1	YBR280C	DCC1	P25559	380 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	CYM1	P32898	989 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	YBR259W	P38338	688 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	OTU2	P38747	307 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	RVS167	P39743	482 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	BIR1	P47134	954 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	RFX1	P48743	811 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	HOS3	Q02959	697 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	EMI1	Q04406	187 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	IVY1	Q04934	453 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	ENT2	Q05785	613 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	HBT1	Q07653	1046 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	LDB18	Q07887	179 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	PLB3	Q08108	686 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	BSC6	Q08280	497 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	PNS1	Q12412	539 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	GFA1	P14742	717 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	EPT1	P22140	391 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	RNQ1	P25367	405 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	MEI4	P29467	408 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	IML3	P38265	245 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	STN1	P38960	494 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	SMC2	P38989	1170 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	RPH1	P39956	796 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	YFR018C	P43599	363 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	ALK1	P43633	760 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	DIC1	Q06143	298 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	YDR262W	Q12331	272 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	GPR1	Q12361	961 aa		4.58	□□□□□ -1.68
SAF1	YBR280C	HRP1	Q99383	534 aa	Known RBP	4.58	□□□□□ -1.68
SAF1	YBR280C	YCR015C	P25616	317 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	RFA2	P26754	273 aa	Known RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	SPT16	P32558	1035 aa	Known RBP	4.57	□□□□□ -1.68
SAF1	YBR280C	ARA1	P38115	344 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	PCA1	P38360	1216 aa		4.57	□□□□□ -1.68
SAF1	YBR280C	ELO3	P40319	345 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms