RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C NAT1P12945 854 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C CAF20P12962 161 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C VPS34P22543 875 aa2.55□□□□□ -2
PRP6YBR055C LCB1P25045 558 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C YCR061WP25639 631 aa2.55□□□□□ -2
PRP6YBR055C URK1P27515 501 aa2.55□□□□□ -2
PRP6YBR055C DPH2P32461 534 aa2.55□□□□□ -2
PRP6YBR055C HIS7P33734 552 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C MAL33P38157 468 aa2.55□□□□□ -2
PRP6YBR055C HRB1P38922 454 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
PRP6YBR055C YJL068CP40363 299 aa2.55□□□□□ -2
PRP6YBR055C AAD10P47182 288 aa2.55□□□□□ -2
PRP6YBR055C AMA1P50082 593 aa2.55□□□□□ -2
PRP6YBR055C PAN2P53010 1115 aaPredicted RBP2.55□□□□□ -2
PRP6YBR055C ERG5P54781 538 aa2.55□□□□□ -2
PRP6YBR055C RMT2Q03305 412 aa2.55□□□□□ -2
PRP6YBR055C YDR132CQ03900 495 aa2.55□□□□□ -2
PRP6YBR055C DLT1Q04216 342 aa2.55□□□□□ -2
PRP6YBR055C YOR019WQ99248 730 aa2.55□□□□□ -2
PRP6YBR055C MSS1P32559 526 aaPredicted RBP2.55□□□□□ -2
PRP6YBR055C LIP5P32875 414 aa2.55□□□□□ -2
PRP6YBR055C ELF1P36053 145 aa2.55□□□□□ -2
PRP6YBR055C MRPL7P36519 292 aa2.55□□□□□ -2
PRP6YBR055C YBR053CP38235 358 aa2.55□□□□□ -2
PRP6YBR055C RFC1P38630 861 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C LRP1P38801 184 aaKnown RBP2.55□□□□□ -2
PRP6YBR055C LNP1P38878 278 aa2.55□□□□□ -2
PRP6YBR055C LTP1P40347 161 aa2.55□□□□□ -2
PRP6YBR055C JEM1P40358 645 aa2.55□□□□□ -2
PRP6YBR055C TMA10Q06177 86 aa2.55□□□□□ -2
PRP6YBR055C PSR1Q07800 427 aa2.55□□□□□ -2
PRP6YBR055C IZH3Q07959 543 aa2.55□□□□□ -2
PRP6YBR055C NMD4Q12129 218 aa2.55□□□□□ -2
PRP6YBR055C SOD2P00447 233 aa2.54□□□□□ -2
PRP6YBR055C KAR3P17119 729 aa2.54□□□□□ -2
PRP6YBR055C MPT5P39016 859 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
PRP6YBR055C SLZ1P40167 298 aa2.54□□□□□ -2
PRP6YBR055C ELO3P40319 345 aa2.54□□□□□ -2
PRP6YBR055C DOT5P40553 215 aa2.54□□□□□ -2
PRP6YBR055C GLO1P50107 326 aa2.54□□□□□ -2
PRP6YBR055C YGR016WP53209 190 aa2.54□□□□□ -2
PRP6YBR055C INN1P53901 409 aa2.54□□□□□ -2
PRP6YBR055C ZDS2P54786 942 aa2.54□□□□□ -2
PRP6YBR055C MFM1Q02783 413 aa2.54□□□□□ -2
PRP6YBR055C SKG3Q06315 1026 aa2.54□□□□□ -2
PRP6YBR055C IRC13Q08630 104 aa2.54□□□□□ -2
PRP6YBR055C TCO89Q08921 799 aa2.54□□□□□ -2
PRP6YBR055C SWT1Q12104 458 aa2.54□□□□□ -2
PRP6YBR055C LAS17Q12446 633 aa2.54□□□□□ -2
PRP6YBR055C DFG16Q99234 619 aa2.54□□□□□ -2
PRP6YBR055C PRE10P21242 288 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
PRP6YBR055C PHO11P35842 467 aa2.54□□□□□ -2
PRP6YBR055C PHO12P38693 467 aa2.54□□□□□ -2
PRP6YBR055C REV7P38927 245 aa2.54□□□□□ -2
PRP6YBR055C PIL1P53252 339 aaKnown RBP2.54□□□□□ -2
PRP6YBR055C MUB1Q03162 620 aa2.54□□□□□ -2
PRP6YBR055C NGL2Q03264 515 aaKnown RBP2.54□□□□□ -2
PRP6YBR055C EFR3Q03653 782 aaKnown RBP2.54□□□□□ -2
PRP6YBR055C YML037CQ03703 340 aa2.54□□□□□ -2
PRP6YBR055C YDR131CQ03899 556 aa2.54□□□□□ -2
PRP6YBR055C AIM32Q04689 311 aa2.54□□□□□ -2
PRP6YBR055C RPS13P05756 151 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C SES1P07284 462 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C PMS1P14242 873 aa2.53□□□□□ -2
PRP6YBR055C FUB1P25659 250 aa2.53□□□□□ -2
PRP6YBR055C GPI10P30777 616 aa2.53□□□□□ -2
PRP6YBR055C ANP1P32629 500 aa2.53□□□□□ -2
PRP6YBR055C CTP1P38152 299 aa2.53□□□□□ -2
PRP6YBR055C ARO9P38840 513 aaPredicted RBP2.53□□□□□ -2
PRP6YBR055C CAJ1P39101 391 aa2.53□□□□□ -2
PRP6YBR055C YEL057CP39983 233 aa2.53□□□□□ -2
PRP6YBR055C IME4P41833 600 aa2.53□□□□□ -2
PRP6YBR055C UBC11P52492 156 aa2.53□□□□□ -2
PRP6YBR055C YGR079WP53249 370 aa2.53□□□□□ -2
PRP6YBR055C ENB1Q08299 606 aa2.53□□□□□ -2
PRP6YBR055C MLH3Q12083 715 aa2.53□□□□□ -2
PRP6YBR055C YOL159C-AQ3E769 90 aa2.53□□□□□ -2
PRP6YBR055C YER175W-AQ8TGU4 54 aa2.53□□□□□ -2
PRP6YBR055C PDE1P22434 369 aa2.53□□□□□ -2
PRP6YBR055C CAP1P28495 268 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C PUB1P32588 453 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PRP6YBR055C UBP13P38187 747 aa2.53□□□□□ -2
PRP6YBR055C SDH8P38345 138 aa2.53□□□□□ -2
PRP6YBR055C YHR097CP38809 366 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C AFG3P39925 761 aa2.53□□□□□ -2
PRP6YBR055C RGI2P40188 164 aa2.53□□□□□ -2
PRP6YBR055C SGF73P53165 657 aa2.53□□□□□ -2
PRP6YBR055C ART5P53244 586 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C BTN2P53286 410 aa2.53□□□□□ -2
PRP6YBR055C DAK1P54838 584 aaKnown RBP2.53□□□□□ -2
PRP6YBR055C YLR345WQ06137 509 aa2.53□□□□□ -2
PRP6YBR055C YSH1Q06224 779 aaPredicted RBP2.53□□□□□ -2
PRP6YBR055C RIM20Q12033 661 aa2.53□□□□□ -2
PRP6YBR055C USV1Q12132 391 aa2.53□□□□□ -2
PRP6YBR055C TRM13Q12383 476 aa2.53□□□□□ -2
PRP6YBR055C YRF1-4O13559 1382 aa2.53□□□□□ -2.01
PRP6YBR055C ILS1P09436 1072 aaKnown RBP2.52□□□□□ -2.01
PRP6YBR055C PWP1P21304 576 aaKnown RBP2.52□□□□□ -2.01
PRP6YBR055C MNE1P24720 663 aa2.52□□□□□ -2.01
PRP6YBR055C SAS3P34218 831 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms