RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	SGF29	P25554	259 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	ILV6	P25605	309 aa	Known RBP	13.62	□□□□□ -0.23
SSA1	YAL005C	OCA5	P38738	679 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	CHS6	P40955	746 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	VEL1	P53058	206 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	TEP1	P53916	434 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	SFB2	P53953	876 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	SIW14	P53965	281 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	RLI1	Q03195	608 aa	Known RBP	13.62	□□□□□ -0.23
SSA1	YAL005C	MSH6	Q03834	1242 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	SLD7	Q08457	257 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	MCM1	P11746	286 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	13.62	□□□□□ -0.23	not detected
SSA1	YAL005C	DPH1	P40487	425 aa	Known RBP	13.62	□□□□□ -0.23
SSA1	YAL005C	STR3	P53101	465 aa	Known RBP	13.62	□□□□□ -0.23
SSA1	YAL005C	MET14	Q02196	202 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	RAD59	Q12223	238 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	PEX11	Q12462	236 aa		13.62	□□□□□ -0.23
SSA1	YAL005C	MRPL8	P22353	238 aa		13.61	□□□□□ -0.23
SSA1	YAL005C	TGL4	P36165	910 aa		13.61	□□□□□ -0.23
SSA1	YAL005C	RPL34A	P87262	121 aa	Predicted RBP	13.61	□□□□□ -0.23
SSA1	YAL005C	YOR223W	Q12015	292 aa		13.61	□□□□□ -0.23
SSA1	YAL005C	RPS14A	P06367	137 aa	Known RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	YCL068C	P25593	260 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	GEX1	P25596	615 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	URA10	P30402	227 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	NDI1	P32340	513 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	HEM12	P32347	362 aa	Predicted RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	STE5	P32917	917 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	TOM20	P35180	183 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	GEX2	P36173	615 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	DUN1	P39009	513 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	RPS14B	P39516	138 aa	Known RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	CDC14	Q00684	551 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	ILV2	P07342	687 aa	Known RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	MRPL25	P23369	157 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	MIH1	P23748	554 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	CTK3	P46963	296 aa	Predicted RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	PIR1	Q03178	341 aa		13.6	□□□□□ -0.23
SSA1	YAL005C	CMS1	Q07897	291 aa	Known RBP	13.6	□□□□□ -0.23
SSA1	YAL005C	SMI1	P32566	505 aa		13.59	□□□□□ -0.23
SSA1	YAL005C	GGA2	P38817	585 aa	Known RBP	13.59	□□□□□ -0.23
SSA1	YAL005C	IST3	P40565	148 aa	Predicted RBP	13.59	□□□□□ -0.23
SSA1	YAL005C	RMD8	P43620	662 aa		13.59	□□□□□ -0.23
SSA1	YAL005C	YEL077C	Q3E7X8	1277 aa		13.59	□□□□□ -0.23
SSA1	YAL005C	SST2	P11972	698 aa	Known RBP	13.58	□□□□□ -0.23
SSA1	YAL005C	DAL81	P21657	970 aa		13.58	□□□□□ -0.23
SSA1	YAL005C	PUP3	P25451	205 aa	Known RBP	13.58	□□□□□ -0.23
SSA1	YAL005C	YHL041W	P38730	149 aa		13.58	□□□□□ -0.23
SSA1	YAL005C	KTR5	P53966	522 aa	Predicted RBP	13.58	□□□□□ -0.23
SSA1	YAL005C	LDB18	Q07887	179 aa		13.58	□□□□□ -0.23
SSA1	YAL005C	RUD3	Q12234	484 aa	Known RBP	13.58	□□□□□ -0.23
SSA1	YAL005C	HIS5	P07172	385 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	CLN1	P20437	546 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	OAF3	P36023	863 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	ALY1	P36117	915 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	RIX1	P38883	763 aa	Predicted RBP	13.58	□□□□□ -0.24
SSA1	YAL005C	FAP1	P53971	965 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	BUD20	Q08004	166 aa	Predicted RBP	13.58	□□□□□ -0.24
SSA1	YAL005C	FLC1	Q08967	793 aa		13.58	□□□□□ -0.24
SSA1	YAL005C	GYP8	P43570	497 aa		13.57	□□□□□ -0.24
SSA1	YAL005C	AIM23	P47015	356 aa		13.57	□□□□□ -0.24
SSA1	YAL005C	AIM14	P53109	570 aa		13.57	□□□□□ -0.24
SSA1	YAL005C	YNR065C	P53751	1116 aa		13.57	□□□□□ -0.24
SSA1	YAL005C	PEX5	P35056	612 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	ETR1	P38071	380 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	NEM1	P38757	446 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	SPC97	P38863	823 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	BUD13	P46947	266 aa	Predicted RBP	13.56	□□□□□ -0.24
SSA1	YAL005C	NUP100	Q02629	959 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	BUD22	Q04347	519 aa	Known RBP	13.56	□□□□□ -0.24
SSA1	YAL005C	YET3	Q07451	203 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	RSB1	Q08417	382 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	ERG20	P08524	352 aa	Known RBP	13.56	□□□□□ -0.24
SSA1	YAL005C	RBK1	P25332	333 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	PAN6	P40459	309 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	YTP1	P53584	459 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	13.56	□□□□□ -0.24	RIP-Chip
SSA1	YAL005C	RSC4	Q02206	625 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	PER33	Q12144	273 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	FAB1	P34756	2278 aa		13.56	□□□□□ -0.24
SSA1	YAL005C	SCH9	P11792	824 aa	Known RBP	13.55	□□□□□ -0.24
SSA1	YAL005C	GDA1	P32621	518 aa		13.55	□□□□□ -0.24
SSA1	YAL005C	CRP1	P38845	465 aa	Known RBP	13.55	□□□□□ -0.24
SSA1	YAL005C	MEF2	P39677	819 aa		13.55	□□□□□ -0.24
SSA1	YAL005C	IPI3	P53877	555 aa		13.55	□□□□□ -0.24
SSA1	YAL005C	IMP4	P53941	290 aa	Known RBP	13.55	□□□□□ -0.24
SSA1	YAL005C	SLT2	Q00772	484 aa		13.55	□□□□□ -0.24
SSA1	YAL005C	RNT1	Q02555	471 aa		13.55	□□□□□ -0.24
SSA1	YAL005C	GPA2	P10823	449 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	INO1	P11986	533 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	HSP60	P19882	572 aa	Known RBP	13.54	□□□□□ -0.24
SSA1	YAL005C	AMS1	P22855	1083 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	MRM1	P25270	412 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	TFG1	P41895	735 aa	Predicted RBP	13.54	□□□□□ -0.24
SSA1	YAL005C	CCT8	P47079	568 aa	Known RBP	13.54	□□□□□ -0.24
SSA1	YAL005C	TRS31	Q03337	283 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	NHX1	Q04121	633 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	YLR149C	Q99296	730 aa		13.54	□□□□□ -0.24
SSA1	YAL005C	TFA2	P36145	328 aa		13.54	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms