RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
ACTR6-213ENST00000553038 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
ACTR6-213ENST00000553038 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 H3BQV1 296 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 TFAP4Q01664 338 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 RESTQ13127 1097 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 PDIA4P13667 645 aaKnown RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 CDC27P30260 824 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 CACNB3P54284 484 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 RASSF7Q02833 373 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 SGMS1Q86VZ5 419 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 MTA3Q9BTC8 594 aa16.4■□□□□ 0.22
ACTR6-213ENST00000553038 ISY1Q9ULR0 285 aaKnown RBP16.4■□□□□ 0.22
ACTR6-213ENST00000553038 NFKBIEO00221 500 aa16.39■□□□□ 0.21
ACTR6-213ENST00000553038 WDHD1O75717 1129 aaPredicted RBP16.39■□□□□ 0.21
ACTR6-213ENST00000553038 HLA-DOAP06340 250 aa16.39■□□□□ 0.21
ACTR6-213ENST00000553038 TCP10Q12799 353 aa16.39■□□□□ 0.21
ACTR6-213ENST00000553038 MRIQ9BWK5 157 aa16.39■□□□□ 0.21
ACTR6-213ENST00000553038 DDX4Q9NQI0 724 aaKnown RBP16.39■□□□□ 0.21
ACTR6-213ENST00000553038 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
ACTR6-213ENST00000553038 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
ACTR6-213ENST00000553038 CDKL5O76039 1030 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
ACTR6-213ENST00000553038 FGRP09769 529 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
ACTR6-213ENST00000553038 TMOD2Q9NZR1 351 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
ACTR6-213ENST00000553038 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 NMT2O60551 498 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 COL4A5P29400 1685 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 ZNF654Q8IZM8 581 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
ACTR6-213ENST00000553038 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
ACTR6-213ENST00000553038 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
ACTR6-213ENST00000553038 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
ACTR6-213ENST00000553038 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 CDK8P49336 464 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 NFIAQ12857 509 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 RTN1Q16799 776 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 C16orf86Q6ZW13 317 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
ACTR6-213ENST00000553038 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
ACTR6-213ENST00000553038 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
ACTR6-213ENST00000553038 CXCL9Q07325 125 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 TNIP1Q15025 636 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 SEC23AQ15436 765 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 MYH1P12882 1939 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 MBD3O95983 291 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 NTRK3Q16288 839 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
ACTR6-213ENST00000553038 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
ACTR6-213ENST00000553038 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
ACTR6-213ENST00000553038 AGBL3Q8NEM8 1001 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 PHKBQ93100 1093 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 UBE2Q2LH0YL09 131 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 XRCC6P12956 609 aaKnown RBP eCLIP16.35■□□□□ 0.21
ACTR6-213ENST00000553038 RASA1P20936 1047 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 NT5C2P49902 561 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 KRT85P78386 507 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 PRMT6Q96LA8 375 aaPredicted RBP16.35■□□□□ 0.21
ACTR6-213ENST00000553038 RRAGDQ9NQL2 400 aaPredicted RBP16.35■□□□□ 0.21
ACTR6-213ENST00000553038 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
ACTR6-213ENST00000553038 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 MRE11P49959 708 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 CCDC82Q8N4S0 544 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
ACTR6-213ENST00000553038 ZNF646O15015 1829 aaPredicted RBP16.34■□□□□ 0.21
ACTR6-213ENST00000553038 FOCADQ5VW36 1801 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 TCP10L2B9ZVM9 353 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 CALM1P0DP23 149 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 CALM2P0DP24 149 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 CALM3P0DP25 149 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 UBE2HP62256 183 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.21
ACTR6-213ENST00000553038 ILDR2Q71H61 639 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms