RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Cntnap5bQ0V8T8 1292 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Cfap52Q5F201 620 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 PhkbQ7TSH2 1085 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 GlmnQ8BZM1 596 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Srgap1Q91Z69 1062 aa13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ftsj3Q9DBE9 838 aaKnown RBP13.3□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Gjd2O54851 321 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Zfp341Q6PGC9 846 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Trim32Q8CH72 655 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Adgrg2Q8CJ12 1009 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Apbb1ipQ8R5A3 670 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ivns1abpQ920Q8 642 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Tjap1Q9DCD5 539 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Atp1a4Q9WV27 1032 aa13.29□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Celf5D3Z4T1 395 aaKnown RBP13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Adam15O88839 864 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Dpf3P58269 378 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Gas1Q01721 343 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Tmem266Q8BZB3 538 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Rbm28Q8CGC6 750 aaKnown RBP13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 1700018B08RikQ9DA83 213 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 AV320801A2AWL3 467 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Gm15023L7MUB4 467 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 DaxxO35613 739 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Kctd3Q8BFX3 815 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pla2g12bQ99P27 195 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 MthfsQ9D110 203 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Styxl1Q9DAR2 321 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 FliiQ9JJ28 1271 aa13.28□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Myh2G3UW82 1942 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Anp32aO35381 247 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Hps5P59438 1126 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ints3Q7TPD0 1041 aaKnown RBP13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Supt20hQ7TT00 530 aaKnown RBP13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Nutm1Q8BHP2 1126 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Gpc2Q8BKV1 579 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Lmod1Q8BVA4 595 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Myl6bQ8CI43 207 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Trex1Q91XB0 314 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Znf330Q922H9 316 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Pdzd3Q99MJ6 498 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 CarsQ9ER72 831 aaKnown RBP13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Ube3bQ9ES34 1070 aa13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Maged1Q9QYH6 775 aaKnown RBP13.27□□□□□ -0.28
Ccdc60-202ENSMUST00000086483 Piezo1E2JF22 2547 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Myh14Q6URW6 2000 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ep400Q8CHI8 3072 aaKnown RBP13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fyb2A2A995 729 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Zbtb7aO88939 569 aaKnown RBP13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Babam1Q3UI43 333 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ccdc85aQ5SP85 500 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Bri3bpQ8BXV2 253 aa13.27□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ube2oQ6ZPJ3 1288 aa13.26□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ccdc9Q8VC31 543 aaKnown RBP13.26□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Znf704Q9ERQ3 566 aa13.26□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Tmod4Q9JLH8 345 aa13.26□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Pet2A2AHY8 747 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 DnttP09838 530 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 ProcP33587 460 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 PtpreP49446 699 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Cyp2c38P56655 490 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Siah1aP61092 282 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Cwc27Q3TKY6 469 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Tdrd1Q99MV1 1172 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 GraspQ9JJA9 392 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Rabgap1A2AWA9 1064 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Capn2O08529 700 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 MyocO70624 490 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fgfr2P21803 821 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Lig1P37913 916 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Rpusd2Q149F1 553 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ccdc33Q3ULW6 985 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Recql4Q75NR7 1216 aaKnown RBP13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam84aQ9D650 292 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Sh2b2Q9JID9 621 aa13.25□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Tmem265E9Q8G3 109 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 LtkP08923 888 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Hoxc10P31257 342 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Prkar2bP31324 416 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam109bQ14B98 259 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam178bQ24JP3 464 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ccdc174Q3U155 467 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Qrich1Q3UA37 777 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ccdc84Q4VA36 332 aaKnown RBP13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Smad3Q8BUN5 425 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 EngaseQ8BX80 734 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Kiaa1024Q8K3V7 917 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ppp2r2dQ925E7 453 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Adck5Q80V03 582 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 E4f1Q8CCE9 783 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Inpp5bQ8K337 993 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Cxcl11Q9JHH5 100 aa13.24□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Shisa4Q8CA71 197 aa13.23□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Ctu1Q99J10 420 aa13.23□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Zfp444Q3TDV8 331 aaKnown RBP13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Parp3Q3ULW8 533 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Prr7Q3V0I2 269 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Gm10392Q3V3I3 114 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Pla2g4fQ50L41 855 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam196bQ6GQV1 535 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms