Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Gm25239-201ENSMUST00000174915 86 ntBASIC44.78■■■■■ 4.76
Trim32Q8CH72 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.61■■■■■ 4.25
Trim32Q8CH72 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
Trim32Q8CH72 Gm24109-201ENSMUST00000175489 103 ntBASIC39.01■■■■□ 3.84
Trim32Q8CH72 Gm15042-201ENSMUST00000120212 883 ntBASIC38.7■■■■□ 3.79
Trim32Q8CH72 Gm15045-201ENSMUST00000117359 883 ntBASIC37.85■■■■□ 3.65
Trim32Q8CH72 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.8■■■■□ 3.64
Trim32Q8CH72 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Trim32Q8CH72 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
Trim32Q8CH72 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Trim32Q8CH72 Gm23366-201ENSMUST00000175022 89 ntBASIC37.25■■■■□ 3.55
Trim32Q8CH72 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.56■■■■□ 3.44
Trim32Q8CH72 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Trim32Q8CH72 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.25■■■■□ 3.39
Trim32Q8CH72 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Trim32Q8CH72 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.12■■■■□ 3.37
Trim32Q8CH72 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Trim32Q8CH72 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Trim32Q8CH72 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Trim32Q8CH72 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.78■■■■□ 3.32
Trim32Q8CH72 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Trim32Q8CH72 Gm25238-201ENSMUST00000174914 89 ntBASIC35.51■■■■□ 3.28
Trim32Q8CH72 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Trim32Q8CH72 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.38■■■■□ 3.25
Trim32Q8CH72 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
Trim32Q8CH72 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Trim32Q8CH72 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Trim32Q8CH72 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.02■■■■□ 3.2
Trim32Q8CH72 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Trim32Q8CH72 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Trim32Q8CH72 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Trim32Q8CH72 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
Trim32Q8CH72 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
Trim32Q8CH72 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Trim32Q8CH72 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.38■■■■□ 3.09
Trim32Q8CH72 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
Trim32Q8CH72 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.28■■■■□ 3.08
Trim32Q8CH72 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.16■■■■□ 3.06
Trim32Q8CH72 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Trim32Q8CH72 Gm25262-201ENSMUST00000174934 133 ntBASIC34.08■■■■□ 3.05
Trim32Q8CH72 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Trim32Q8CH72 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.96■■■■□ 3.03
Trim32Q8CH72 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.89■■■■□ 3.02
Trim32Q8CH72 Gm27325-201ENSMUST00000175467 74 ntBASIC33.85■■■■□ 3.01
Trim32Q8CH72 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
Trim32Q8CH72 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Trim32Q8CH72 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Trim32Q8CH72 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
Trim32Q8CH72 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.56■■■□□ 2.96
Trim32Q8CH72 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.52■■■□□ 2.96
Trim32Q8CH72 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.52■■■□□ 2.96
Trim32Q8CH72 Rab21-202ENSMUST00000218831 843 ntBASIC33.45■■■□□ 2.95
Trim32Q8CH72 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.41■■■□□ 2.94
Trim32Q8CH72 Psd-208ENSMUST00000224556 2034 ntBASIC33.4■■■□□ 2.94
Trim32Q8CH72 Gm26115-201ENSMUST00000175605 87 ntBASIC33.39■■■□□ 2.94
Trim32Q8CH72 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.27■■■□□ 2.92
Trim32Q8CH72 Gm8109-201ENSMUST00000194076 746 ntBASIC33.26■■■□□ 2.91
Trim32Q8CH72 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Trim32Q8CH72 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Trim32Q8CH72 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Trim32Q8CH72 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.18■■■□□ 2.9
Trim32Q8CH72 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Trim32Q8CH72 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Trim32Q8CH72 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Trim32Q8CH72 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.12■■■□□ 2.89
Trim32Q8CH72 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
Trim32Q8CH72 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.88■■■□□ 2.85
Trim32Q8CH72 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Trim32Q8CH72 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.84■■■□□ 2.85
Trim32Q8CH72 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.76■■■□□ 2.83
Trim32Q8CH72 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Trim32Q8CH72 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.74■■■□□ 2.83
Trim32Q8CH72 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Trim32Q8CH72 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Trim32Q8CH72 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Trim32Q8CH72 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Trim32Q8CH72 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Trim32Q8CH72 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Trim32Q8CH72 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.6■■■□□ 2.81
Trim32Q8CH72 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Trim32Q8CH72 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Trim32Q8CH72 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Trim32Q8CH72 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.39■■■□□ 2.78
Trim32Q8CH72 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.38■■■□□ 2.77
Trim32Q8CH72 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.34■■■□□ 2.77
Trim32Q8CH72 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Trim32Q8CH72 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Trim32Q8CH72 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Trim32Q8CH72 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Trim32Q8CH72 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Trim32Q8CH72 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Trim32Q8CH72 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.19■■■□□ 2.74
Trim32Q8CH72 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.18■■■□□ 2.74
Trim32Q8CH72 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
Trim32Q8CH72 Gm24804-201ENSMUST00000174982 85 ntBASIC32.13■■■□□ 2.73
Trim32Q8CH72 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
Trim32Q8CH72 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.06■■■□□ 2.72
Trim32Q8CH72 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Trim32Q8CH72 Gm27322-201ENSMUST00000184007 104 ntBASIC32.03■■■□□ 2.72
Trim32Q8CH72 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms