Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Gm25239-201ENSMUST00000174915 86 ntBASIC44,78■■■■■ 4,76
Trim32Q8CH72 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41,61■■■■■ 4,25
Trim32Q8CH72 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,88■■■■■ 4,13
Trim32Q8CH72 Gm24109-201ENSMUST00000175489 103 ntBASIC39,01■■■■□ 3,84
Trim32Q8CH72 Gm15042-201ENSMUST00000120212 883 ntBASIC38,7■■■■□ 3,79
Trim32Q8CH72 Gm15045-201ENSMUST00000117359 883 ntBASIC37,85■■■■□ 3,65
Trim32Q8CH72 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,8■■■■□ 3,64
Trim32Q8CH72 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37,66■■■■□ 3,62
Trim32Q8CH72 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,54■■■■□ 3,6
Trim32Q8CH72 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,39■■■■□ 3,58
Trim32Q8CH72 Gm23366-201ENSMUST00000175022 89 ntBASIC37,25■■■■□ 3,55
Trim32Q8CH72 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,56■■■■□ 3,44
Trim32Q8CH72 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36,55■■■■□ 3,44
Trim32Q8CH72 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36,25■■■■□ 3,39
Trim32Q8CH72 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,16■■■■□ 3,38
Trim32Q8CH72 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36,12■■■■□ 3,37
Trim32Q8CH72 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,08■■■■□ 3,37
Trim32Q8CH72 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,05■■■■□ 3,36
Trim32Q8CH72 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,8■■■■□ 3,32
Trim32Q8CH72 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,78■■■■□ 3,32
Trim32Q8CH72 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,64■■■■□ 3,3
Trim32Q8CH72 Gm25238-201ENSMUST00000174914 89 ntBASIC35,51■■■■□ 3,28
Trim32Q8CH72 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,45■■■■□ 3,27
Trim32Q8CH72 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35,38■■■■□ 3,25
Trim32Q8CH72 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35,33■■■■□ 3,25
Trim32Q8CH72 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35,3■■■■□ 3,24
Trim32Q8CH72 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Trim32Q8CH72 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35,02■■■■□ 3,2
Trim32Q8CH72 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,91■■■■□ 3,18
Trim32Q8CH72 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34,83■■■■□ 3,17
Trim32Q8CH72 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34,74■■■■□ 3,15
Trim32Q8CH72 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34,74■■■■□ 3,15
Trim32Q8CH72 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,64■■■■□ 3,14
Trim32Q8CH72 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34,54■■■■□ 3,12
Trim32Q8CH72 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34,38■■■■□ 3,09
Trim32Q8CH72 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34,3■■■■□ 3,08
Trim32Q8CH72 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,28■■■■□ 3,08
Trim32Q8CH72 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,16■■■■□ 3,06
Trim32Q8CH72 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,13■■■■□ 3,05
Trim32Q8CH72 Gm25262-201ENSMUST00000174934 133 ntBASIC34,08■■■■□ 3,05
Trim32Q8CH72 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34,02■■■■□ 3,04
Trim32Q8CH72 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33,96■■■■□ 3,03
Trim32Q8CH72 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,89■■■■□ 3,02
Trim32Q8CH72 Gm27325-201ENSMUST00000175467 74 ntBASIC33,85■■■■□ 3,01
Trim32Q8CH72 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33,82■■■■□ 3
Trim32Q8CH72 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Trim32Q8CH72 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33,64■■■□□ 2,98
Trim32Q8CH72 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33,57■■■□□ 2,97
Trim32Q8CH72 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33,56■■■□□ 2,96
Trim32Q8CH72 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33,52■■■□□ 2,96
Trim32Q8CH72 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,52■■■□□ 2,96
Trim32Q8CH72 Rab21-202ENSMUST00000218831 843 ntBASIC33,45■■■□□ 2,95
Trim32Q8CH72 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,41■■■□□ 2,94
Trim32Q8CH72 Psd-208ENSMUST00000224556 2034 ntBASIC33,4■■■□□ 2,94
Trim32Q8CH72 Gm26115-201ENSMUST00000175605 87 ntBASIC33,39■■■□□ 2,94
Trim32Q8CH72 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,27■■■□□ 2,92
Trim32Q8CH72 Gm8109-201ENSMUST00000194076 746 ntBASIC33,26■■■□□ 2,91
Trim32Q8CH72 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
Trim32Q8CH72 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33,25■■■□□ 2,91
Trim32Q8CH72 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33,24■■■□□ 2,91
Trim32Q8CH72 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,18■■■□□ 2,9
Trim32Q8CH72 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33,18■■■□□ 2,9
Trim32Q8CH72 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,16■■■□□ 2,9
Trim32Q8CH72 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,14■■■□□ 2,9
Trim32Q8CH72 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33,12■■■□□ 2,89
Trim32Q8CH72 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,12■■■□□ 2,89
Trim32Q8CH72 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32,88■■■□□ 2,85
Trim32Q8CH72 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Trim32Q8CH72 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32,84■■■□□ 2,85
Trim32Q8CH72 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32,76■■■□□ 2,83
Trim32Q8CH72 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32,75■■■□□ 2,83
Trim32Q8CH72 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32,74■■■□□ 2,83
Trim32Q8CH72 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32,71■■■□□ 2,83
Trim32Q8CH72 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,7■■■□□ 2,83
Trim32Q8CH72 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32,67■■■□□ 2,82
Trim32Q8CH72 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Trim32Q8CH72 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,62■■■□□ 2,81
Trim32Q8CH72 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Trim32Q8CH72 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32,6■■■□□ 2,81
Trim32Q8CH72 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32,52■■■□□ 2,8
Trim32Q8CH72 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
Trim32Q8CH72 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Trim32Q8CH72 Gm17082-201ENSMUST00000166043 1091 ntBASIC32,39■■■□□ 2,78
Trim32Q8CH72 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,38■■■□□ 2,77
Trim32Q8CH72 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,34■■■□□ 2,77
Trim32Q8CH72 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Trim32Q8CH72 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32,26■■■□□ 2,75
Trim32Q8CH72 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32,25■■■□□ 2,75
Trim32Q8CH72 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Trim32Q8CH72 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32,22■■■□□ 2,75
Trim32Q8CH72 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32,19■■■□□ 2,74
Trim32Q8CH72 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32,19■■■□□ 2,74
Trim32Q8CH72 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32,18■■■□□ 2,74
Trim32Q8CH72 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32,15■■■□□ 2,74
Trim32Q8CH72 Gm24804-201ENSMUST00000174982 85 ntBASIC32,13■■■□□ 2,73
Trim32Q8CH72 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32,09■■■□□ 2,73
Trim32Q8CH72 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,06■■■□□ 2,72
Trim32Q8CH72 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32,04■■■□□ 2,72
Trim32Q8CH72 Gm27322-201ENSMUST00000184007 104 ntBASIC32,03■■■□□ 2,72
Trim32Q8CH72 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2,71
Retrieved 100 of 76,532 protein–RNA pairs in 9,8 ms