Protein–RNA interactions for Protein: Q99MJ6

Pdzd3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd3Q99MJ6 Gm25239-201ENSMUST00000174915 86 ntBASIC42,55■■■■■ 4,4
Pdzd3Q99MJ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39,9■■■■□ 3,98
Pdzd3Q99MJ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39,17■■■■□ 3,86
Pdzd3Q99MJ6 Gm24109-201ENSMUST00000175489 103 ntBASIC37,53■■■■□ 3,6
Pdzd3Q99MJ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,17■■■■□ 3,38
Pdzd3Q99MJ6 Gm15042-201ENSMUST00000120212 883 ntBASIC36,09■■■■□ 3,37
Pdzd3Q99MJ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36■■■■□ 3,35
Pdzd3Q99MJ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,91■■■■□ 3,34
Pdzd3Q99MJ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,48■■■■□ 3,27
Pdzd3Q99MJ6 Gm23366-201ENSMUST00000175022 89 ntBASIC35,38■■■■□ 3,25
Pdzd3Q99MJ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,36■■■■□ 3,25
Pdzd3Q99MJ6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,24■■■■□ 3,23
Pdzd3Q99MJ6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,11■■■■□ 3,21
Pdzd3Q99MJ6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,1■■■■□ 3,21
Pdzd3Q99MJ6 Gm15045-201ENSMUST00000117359 883 ntBASIC35,07■■■■□ 3,2
Pdzd3Q99MJ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,81■■■■□ 3,16
Pdzd3Q99MJ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Pdzd3Q99MJ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,06■■■■□ 3,04
Pdzd3Q99MJ6 Gm25238-201ENSMUST00000174914 89 ntBASIC33,94■■■■□ 3,02
Pdzd3Q99MJ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Pdzd3Q99MJ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,78■■■■□ 3
Pdzd3Q99MJ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,78■■■■□ 3
Pdzd3Q99MJ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,55■■■□□ 2,96
Pdzd3Q99MJ6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,29■■■□□ 2,92
Pdzd3Q99MJ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33,19■■■□□ 2,9
Pdzd3Q99MJ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,17■■■□□ 2,9
Pdzd3Q99MJ6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,13■■■□□ 2,89
Pdzd3Q99MJ6 Gm25262-201ENSMUST00000174934 133 ntBASIC33,09■■■□□ 2,89
Pdzd3Q99MJ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,01■■■□□ 2,88
Pdzd3Q99MJ6 Gm26115-201ENSMUST00000175605 87 ntBASIC32,75■■■□□ 2,83
Pdzd3Q99MJ6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,68■■■□□ 2,82
Pdzd3Q99MJ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,66■■■□□ 2,82
Pdzd3Q99MJ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,65■■■□□ 2,82
Pdzd3Q99MJ6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32,63■■■□□ 2,81
Pdzd3Q99MJ6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,44■■■□□ 2,78
Pdzd3Q99MJ6 Gm8109-201ENSMUST00000194076 746 ntBASIC32,42■■■□□ 2,78
Pdzd3Q99MJ6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,4■■■□□ 2,78
Pdzd3Q99MJ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,35■■■□□ 2,77
Pdzd3Q99MJ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32,14■■■□□ 2,74
Pdzd3Q99MJ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,1■■■□□ 2,73
Pdzd3Q99MJ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Pdzd3Q99MJ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,86■■■□□ 2,69
Pdzd3Q99MJ6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,86■■■□□ 2,69
Pdzd3Q99MJ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Pdzd3Q99MJ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Pdzd3Q99MJ6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,65■■■□□ 2,66
Pdzd3Q99MJ6 Rab21-202ENSMUST00000218831 843 ntBASIC31,57■■■□□ 2,64
Pdzd3Q99MJ6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,52■■■□□ 2,64
Pdzd3Q99MJ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Pdzd3Q99MJ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Pdzd3Q99MJ6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,46■■■□□ 2,63
Pdzd3Q99MJ6 Gm27325-201ENSMUST00000175467 74 ntBASIC31,39■■■□□ 2,62
Pdzd3Q99MJ6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,29■■■□□ 2,6
Pdzd3Q99MJ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,29■■■□□ 2,6
Pdzd3Q99MJ6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Pdzd3Q99MJ6 Psd-208ENSMUST00000224556 2034 ntBASIC31,23■■■□□ 2,59
Pdzd3Q99MJ6 Gm24804-201ENSMUST00000174982 85 ntBASIC31,2■■■□□ 2,59
Pdzd3Q99MJ6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,19■■■□□ 2,58
Pdzd3Q99MJ6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,06■■■□□ 2,56
Pdzd3Q99MJ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Pdzd3Q99MJ6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Pdzd3Q99MJ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,99■■■□□ 2,55
Pdzd3Q99MJ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,97■■■□□ 2,55
Pdzd3Q99MJ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,97■■■□□ 2,55
Pdzd3Q99MJ6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,95■■■□□ 2,55
Pdzd3Q99MJ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,91■■■□□ 2,54
Pdzd3Q99MJ6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Pdzd3Q99MJ6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,87■■■□□ 2,53
Pdzd3Q99MJ6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Pdzd3Q99MJ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,81■■■□□ 2,52
Pdzd3Q99MJ6 Zfp131-205ENSMUST00000223812 663 ntBASIC30,79■■■□□ 2,52
Pdzd3Q99MJ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,76■■■□□ 2,51
Pdzd3Q99MJ6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Pdzd3Q99MJ6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,69■■■□□ 2,5
Pdzd3Q99MJ6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Pdzd3Q99MJ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,62■■■□□ 2,49
Pdzd3Q99MJ6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30,62■■■□□ 2,49
Pdzd3Q99MJ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Pdzd3Q99MJ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Pdzd3Q99MJ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,53■■■□□ 2,48
Pdzd3Q99MJ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pdzd3Q99MJ6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Pdzd3Q99MJ6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,45■■■□□ 2,47
Pdzd3Q99MJ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30,42■■■□□ 2,46
Pdzd3Q99MJ6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Pdzd3Q99MJ6 Gm27322-201ENSMUST00000184007 104 ntBASIC30,36■■■□□ 2,45
Pdzd3Q99MJ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Pdzd3Q99MJ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Pdzd3Q99MJ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Pdzd3Q99MJ6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30,23■■■□□ 2,43
Pdzd3Q99MJ6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Pdzd3Q99MJ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,2■■■□□ 2,43
Pdzd3Q99MJ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Pdzd3Q99MJ6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Pdzd3Q99MJ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Pdzd3Q99MJ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30,12■■■□□ 2,41
Pdzd3Q99MJ6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Pdzd3Q99MJ6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30,11■■■□□ 2,41
Pdzd3Q99MJ6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30,11■■■□□ 2,41
Pdzd3Q99MJ6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms