Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Gm25239-201ENSMUST00000174915 86 ntBASIC43■■■■■ 4.47
Smad3Q8BUN5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
Smad3Q8BUN5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Smad3Q8BUN5 Gm24109-201ENSMUST00000175489 103 ntBASIC37.62■■■■□ 3.61
Smad3Q8BUN5 Gm15042-201ENSMUST00000120212 883 ntBASIC36.9■■■■□ 3.5
Smad3Q8BUN5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
Smad3Q8BUN5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
Smad3Q8BUN5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Smad3Q8BUN5 Gm15045-201ENSMUST00000117359 883 ntBASIC35.93■■■■□ 3.34
Smad3Q8BUN5 Gm23366-201ENSMUST00000175022 89 ntBASIC35.86■■■■□ 3.33
Smad3Q8BUN5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Smad3Q8BUN5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.32■■■■□ 3.24
Smad3Q8BUN5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.06■■■■□ 3.2
Smad3Q8BUN5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Smad3Q8BUN5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Smad3Q8BUN5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.87■■■■□ 3.17
Smad3Q8BUN5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Smad3Q8BUN5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Smad3Q8BUN5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Smad3Q8BUN5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.31■■■■□ 3.08
Smad3Q8BUN5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
Smad3Q8BUN5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Smad3Q8BUN5 Gm25238-201ENSMUST00000174914 89 ntBASIC34.15■■■■□ 3.06
Smad3Q8BUN5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Smad3Q8BUN5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.54■■■□□ 2.96
Smad3Q8BUN5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Smad3Q8BUN5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
Smad3Q8BUN5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
Smad3Q8BUN5 Gm25262-201ENSMUST00000174934 133 ntBASIC33.14■■■□□ 2.9
Smad3Q8BUN5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Smad3Q8BUN5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.06■■■□□ 2.88
Smad3Q8BUN5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.88■■■□□ 2.85
Smad3Q8BUN5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Smad3Q8BUN5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.75■■■□□ 2.83
Smad3Q8BUN5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Smad3Q8BUN5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.68■■■□□ 2.82
Smad3Q8BUN5 Gm26115-201ENSMUST00000175605 87 ntBASIC32.61■■■□□ 2.81
Smad3Q8BUN5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.61■■■□□ 2.81
Smad3Q8BUN5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.59■■■□□ 2.81
Smad3Q8BUN5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Smad3Q8BUN5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Smad3Q8BUN5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Smad3Q8BUN5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.37■■■□□ 2.77
Smad3Q8BUN5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Smad3Q8BUN5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Smad3Q8BUN5 Gm8109-201ENSMUST00000194076 746 ntBASIC32.28■■■□□ 2.76
Smad3Q8BUN5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Smad3Q8BUN5 Gm27325-201ENSMUST00000175467 74 ntBASIC32.21■■■□□ 2.75
Smad3Q8BUN5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Smad3Q8BUN5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Smad3Q8BUN5 Rab21-202ENSMUST00000218831 843 ntBASIC32.12■■■□□ 2.73
Smad3Q8BUN5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.12■■■□□ 2.73
Smad3Q8BUN5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.99■■■□□ 2.71
Smad3Q8BUN5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Smad3Q8BUN5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Smad3Q8BUN5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Smad3Q8BUN5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Smad3Q8BUN5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.63■■■□□ 2.65
Smad3Q8BUN5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Smad3Q8BUN5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.61■■■□□ 2.65
Smad3Q8BUN5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Smad3Q8BUN5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.59■■■□□ 2.65
Smad3Q8BUN5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smad3Q8BUN5 Psd-208ENSMUST00000224556 2034 ntBASIC31.58■■■□□ 2.65
Smad3Q8BUN5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smad3Q8BUN5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smad3Q8BUN5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smad3Q8BUN5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Smad3Q8BUN5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smad3Q8BUN5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Smad3Q8BUN5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.22■■■□□ 2.59
Smad3Q8BUN5 Gm24804-201ENSMUST00000174982 85 ntBASIC31.18■■■□□ 2.58
Smad3Q8BUN5 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.14■■■□□ 2.58
Smad3Q8BUN5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.07■■■□□ 2.56
Smad3Q8BUN5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Smad3Q8BUN5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Smad3Q8BUN5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.98■■■□□ 2.55
Smad3Q8BUN5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Smad3Q8BUN5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
Smad3Q8BUN5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smad3Q8BUN5 Gm27322-201ENSMUST00000184007 104 ntBASIC30.79■■■□□ 2.52
Smad3Q8BUN5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smad3Q8BUN5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Smad3Q8BUN5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.77■■■□□ 2.52
Smad3Q8BUN5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.73■■■□□ 2.51
Smad3Q8BUN5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Smad3Q8BUN5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Smad3Q8BUN5 Zfp131-205ENSMUST00000223812 663 ntBASIC30.66■■■□□ 2.5
Smad3Q8BUN5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Smad3Q8BUN5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Smad3Q8BUN5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.62■■■□□ 2.49
Smad3Q8BUN5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Smad3Q8BUN5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Smad3Q8BUN5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Smad3Q8BUN5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Smad3Q8BUN5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.53■■■□□ 2.48
Smad3Q8BUN5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Smad3Q8BUN5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Smad3Q8BUN5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Smad3Q8BUN5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms