RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 Dnah8Q91XQ0 4731 aa8.54□□□□□ -1.04
Chrna3-202ENSMUST00000214204 7530416G11RikJ3QJX6 159 aa8.51□□□□□ -1.05
Chrna3-202ENSMUST00000214204 Fat3Q8BNA6 4555 aa8.49□□□□□ -1.05
Chrna3-202ENSMUST00000214204 Gm20604F8WIA3 75 aa8.49□□□□□ -1.05
Chrna3-202ENSMUST00000214204 Defb12Q8K4N3 78 aa8.48□□□□□ -1.05
Chrna3-202ENSMUST00000214204 Spink8Q09TK9 105 aa8.47□□□□□ -1.05
Chrna3-202ENSMUST00000214204 Gm2310J3QNJ2 377 aa8.43□□□□□ -1.06
Chrna3-202ENSMUST00000214204 4930518I15RikQ3V2W7 57 aa8.42□□□□□ -1.06
Chrna3-202ENSMUST00000214204 Herc2Q4U2R1 4836 aa8.4□□□□□ -1.06
Chrna3-202ENSMUST00000214204 Samd13D3YUG0 102 aa8.39□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Gm9736A0A1W2P7N1 277 aa8.39□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Prr13Q9CQJ5 137 aa8.38□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Kiaa1109A2AAE1 5005 aa8.37□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Cypt15B1AXS0 87 aa8.37□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Ndufc1Q9CQY9 76 aa8.37□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Mycbp2Q7TPH6 4711 aa8.37□□□□□ -1.07
Chrna3-202ENSMUST00000214204 A0A286YE49 62 aa8.36□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Serp2Q6TAW2 65 aa8.36□□□□□ -1.07
Chrna3-202ENSMUST00000214204 Igkv3-3A0A140T8Q0 119 aa8.33□□□□□ -1.08
Chrna3-202ENSMUST00000214204 Apoc4Q61268 124 aa8.33□□□□□ -1.08
Chrna3-202ENSMUST00000214204 Gm10267M0QWD8 85 aa8.31□□□□□ -1.08
Chrna3-202ENSMUST00000214204 Birc6O88738 4882 aa8.3□□□□□ -1.08
Chrna3-202ENSMUST00000214204 B230307C23RikQ8BLB2 64 aa8.3□□□□□ -1.08
Chrna3-202ENSMUST00000214204 BikO70337 150 aa8.29□□□□□ -1.08
Chrna3-202ENSMUST00000214204 1700074P13RikQ9D9G7 251 aa8.28□□□□□ -1.08
Chrna3-202ENSMUST00000214204 HydinQ80W93 5154 aa8.27□□□□□ -1.09
Chrna3-202ENSMUST00000214204 A530084C06RikQ3UTW2 186 aa8.25□□□□□ -1.09
Chrna3-202ENSMUST00000214204 Defb13Q8R2I4 64 aa8.25□□□□□ -1.09
Chrna3-202ENSMUST00000214204 D6Ertd527eA0A0N4SWI3 464 aa8.23□□□□□ -1.09
Chrna3-202ENSMUST00000214204 Dnhd1D3Z2X2 4750 aa8.22□□□□□ -1.09
Chrna3-202ENSMUST00000214204 Rps29P62274 56 aa8.21□□□□□ -1.1
Chrna3-202ENSMUST00000214204 GhrhP16043 103 aa8.19□□□□□ -1.1
Chrna3-202ENSMUST00000214204 Gm11939A2A592 99 aa8.19□□□□□ -1.1
Chrna3-202ENSMUST00000214204 PcloQ9QYX7 5068 aa8.16□□□□□ -1.1
Chrna3-202ENSMUST00000214204 Gm5965D3Z724 196 aa8.13□□□□□ -1.11
Chrna3-202ENSMUST00000214204 Defb38Q7TNV7 63 aa8.13□□□□□ -1.11
Chrna3-202ENSMUST00000214204 Gm26620Q9CY65 116 aa8.11□□□□□ -1.11
Chrna3-202ENSMUST00000214204 Coa6Q8BGD8 79 aa8.1□□□□□ -1.11
Chrna3-202ENSMUST00000214204 Spint4Q9D263 159 aa8.09□□□□□ -1.11
Chrna3-202ENSMUST00000214204 Atox1O08997 68 aaKnown RBP8.08□□□□□ -1.12
Chrna3-202ENSMUST00000214204 Chtf8P0CG14 533 aa8.07□□□□□ -1.12
Chrna3-202ENSMUST00000214204 Gm28539A0A087WSL9 92 aa8.05□□□□□ -1.12
Chrna3-202ENSMUST00000214204 Lrp2A2ARV4 4660 aa8.04□□□□□ -1.12
Chrna3-202ENSMUST00000214204 Krtap3-2Q9D638 99 aa8.02□□□□□ -1.13
Chrna3-202ENSMUST00000214204 Krtap3-3Q9D7P0 99 aa8.02□□□□□ -1.13
Chrna3-202ENSMUST00000214204 SnurfQ9WU12 71 aa8.02□□□□□ -1.13
Chrna3-202ENSMUST00000214204 SmcpP15265 143 aa8.01□□□□□ -1.13
Chrna3-202ENSMUST00000214204 Gm5767A0A0J9YTU8 78 aa8□□□□□ -1.13
Chrna3-202ENSMUST00000214204 Scgb1b2O35176 93 aa8□□□□□ -1.13
Chrna3-202ENSMUST00000214204 Tmem258P61166 79 aa7.96□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Coa5Q99M07 74 aa7.94□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Gm10160F6Y577 67 aa7.93□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Krtap15-1Q9QZU5 150 aa7.93□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Gm10999F6Q4M4 69 aa7.93□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Gm21798J3QNU5 87 aa7.92□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Smim20D3Z7Q2 69 aa7.91□□□□□ -1.14
Chrna3-202ENSMUST00000214204 Q8BGJ3 129 aa7.89□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Gm19935A0A1B0GSF9 52 aa7.89□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Gm4491E0CX42 125 aa7.87□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Pet100P0DJE0 76 aa7.87□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Smlr1J3QMJ4 66 aa7.86□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Lce1mQ9CR91 182 aa7.84□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Herc1E9PZP8 4859 aa7.84□□□□□ -1.15
Chrna3-202ENSMUST00000214204 Pcp4P63054 62 aa7.82□□□□□ -1.16
Chrna3-202ENSMUST00000214204 Brk1Q91VR8 75 aa7.81□□□□□ -1.16
Chrna3-202ENSMUST00000214204 2310034C09RikQ9D746 214 aa7.8□□□□□ -1.16
Chrna3-202ENSMUST00000214204 A930033H14RikG5E8X6 103 aa7.79□□□□□ -1.16
Chrna3-202ENSMUST00000214204 Rpl37Q9D823 97 aa7.78□□□□□ -1.16
Chrna3-202ENSMUST00000214204 Gm9821Q8K076 103 aa7.77□□□□□ -1.17
Chrna3-202ENSMUST00000214204 2310079G19RikQ9D6L6 185 aa7.75□□□□□ -1.17
Chrna3-202ENSMUST00000214204 Cdc42se1Q8BHL7 80 aa7.72□□□□□ -1.17
Chrna3-202ENSMUST00000214204 Serp1Q9Z1W5 66 aa7.72□□□□□ -1.17
Chrna3-202ENSMUST00000214204 Gm10197F6QEY5 67 aa7.7□□□□□ -1.18
Chrna3-202ENSMUST00000214204 Defb1P56386 69 aa7.7□□□□□ -1.18
Chrna3-202ENSMUST00000214204 Rnase13Q5GAM7 153 aa7.7□□□□□ -1.18
Chrna3-202ENSMUST00000214204 Rps28P62858 69 aaKnown RBP7.68□□□□□ -1.18
Chrna3-202ENSMUST00000214204 Gm10643Q3URG9 111 aa7.66□□□□□ -1.18
Chrna3-202ENSMUST00000214204 2310057N15RikQ9D6T8 200 aa7.66□□□□□ -1.18
Chrna3-202ENSMUST00000214204 4930507D05RikQ8C9C9 103 aa7.64□□□□□ -1.19
Chrna3-202ENSMUST00000214204 Gm20661K7N787 53 aa7.61□□□□□ -1.19
Chrna3-202ENSMUST00000214204 Gm18596A0A1W2P860 280 aa7.57□□□□□ -1.2
Chrna3-202ENSMUST00000214204 Phxr4P15974 95 aa7.53□□□□□ -1.2
Chrna3-202ENSMUST00000214204 H2al1aQ5M8Q2 105 aa7.53□□□□□ -1.2
Chrna3-202ENSMUST00000214204 H2al1eQ810S6 105 aa7.53□□□□□ -1.2
Chrna3-202ENSMUST00000214204 Ush2AQ2QI47 5193 aa7.51□□□□□ -1.21
Chrna3-202ENSMUST00000214204 Gm17416Q30KP4 66 aa7.47□□□□□ -1.21
Chrna3-202ENSMUST00000214204 Sec61bQ9CQS8 96 aaKnown RBP7.47□□□□□ -1.21
Chrna3-202ENSMUST00000214204 Crct1Q6PAI5 102 aa7.47□□□□□ -1.21
Chrna3-202ENSMUST00000214204 9230102O04RikA2ASX7 82 aa7.46□□□□□ -1.22
Chrna3-202ENSMUST00000214204 H2al1bA0A087WP11 105 aa7.43□□□□□ -1.22
Chrna3-202ENSMUST00000214204 SptssbQ925E8 76 aa7.43□□□□□ -1.22
Chrna3-202ENSMUST00000214204 Gm10318A0A1W2P728 225 aa7.4□□□□□ -1.22
Chrna3-202ENSMUST00000214204 Hmcn2A2AJ76 5100 aa7.4□□□□□ -1.22
Chrna3-202ENSMUST00000214204 Ubr4A2AN08 5180 aa7.4□□□□□ -1.23
Chrna3-202ENSMUST00000214204 Cox6b2Q80ZN9 88 aa7.37□□□□□ -1.23
Chrna3-202ENSMUST00000214204 Krtap16-3Q8C1I6 86 aa7.33□□□□□ -1.24
Chrna3-202ENSMUST00000214204 Uqcr11Q9CPX8 56 aa7.31□□□□□ -1.24
Chrna3-202ENSMUST00000214204 Gm9789Q8BIG3 52 aa7.31□□□□□ -1.24
Chrna3-202ENSMUST00000214204 Krtap13-1Q8K198 168 aa7.3□□□□□ -1.24
Chrna3-202ENSMUST00000214204 2210017I01RikA0A0A6YVV1 95 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms