RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 NischQ80TM9 1593 aa30.8■■■□□ 2.52
Chrna3-202ENSMUST00000214204 Gm35339A0A140LHH9 1649 aa30.66■■■□□ 2.5
Chrna3-202ENSMUST00000214204 Abcc9P70170 1546 aa29.83■■■□□ 2.37
Chrna3-202ENSMUST00000214204 Abcc8B2RUS7 1588 aa29.47■■■□□ 2.31
Chrna3-202ENSMUST00000214204 ScribQ80U72 1612 aa27.97■■■□□ 2.07
Chrna3-202ENSMUST00000214204 Rhox8Q6VSS7 320 aa27.73■■■□□ 2.03
Chrna3-202ENSMUST00000214204 Kdm5dQ62240 1548 aa27.24■■□□□ 1.95
Chrna3-202ENSMUST00000214204 Dcaf1Q80TR8 1506 aa27.21■■□□□ 1.95
Chrna3-202ENSMUST00000214204 NacadQ5SWP3 1504 aa27.07■■□□□ 1.92
Chrna3-202ENSMUST00000214204 Rb1cc1Q9ESK9 1588 aa26.94■■□□□ 1.9
Chrna3-202ENSMUST00000214204 Baz1aO88379 1555 aa26.55■■□□□ 1.84
Chrna3-202ENSMUST00000214204 Sycp2Q9CUU3 1500 aa26.53■■□□□ 1.84
Chrna3-202ENSMUST00000214204 Ccdc180J3QNE4 1664 aa26.47■■□□□ 1.83
Chrna3-202ENSMUST00000214204 Rtl1Q7M732 1744 aa26.37■■□□□ 1.81
Chrna3-202ENSMUST00000214204 Zcchc6Q5BLK4 1491 aaKnown RBP26.16■■□□□ 1.78
Chrna3-202ENSMUST00000214204 Crybg2B7ZCC2 1516 aa26.14■■□□□ 1.78
Chrna3-202ENSMUST00000214204 BicraF8VPZ9 1578 aa26.11■■□□□ 1.77
Chrna3-202ENSMUST00000214204 Smarca2Q6DIC0 1577 aa25.88■■□□□ 1.73
Chrna3-202ENSMUST00000214204 Ccdc136Q3TVA9 1136 aa25.87■■□□□ 1.73
Chrna3-202ENSMUST00000214204 Cecr2E9Q2Z1 1453 aa25.58■■□□□ 1.69
Chrna3-202ENSMUST00000214204 Trim41Q5NCC3 630 aa25.24■■□□□ 1.63
Chrna3-202ENSMUST00000214204 Smarca4Q3TKT4 1613 aaKnown RBP25.21■■□□□ 1.63
Chrna3-202ENSMUST00000214204 Brd4Q9ESU6 1400 aaKnown RBP25.17■■□□□ 1.62
Chrna3-202ENSMUST00000214204 Synj1Q8CHC4 1574 aa25.16■■□□□ 1.62
Chrna3-202ENSMUST00000214204 CftrP26361 1476 aa25.05■■□□□ 1.6
Chrna3-202ENSMUST00000214204 Pds5bQ4VA53 1446 aaKnown RBP25.03■■□□□ 1.6
Chrna3-202ENSMUST00000214204 Atad2bE9Q166 1460 aaKnown RBP25.01■■□□□ 1.59
Chrna3-202ENSMUST00000214204 Iqgap2Q3UQ44 1575 aa24.98■■□□□ 1.59
Chrna3-202ENSMUST00000214204 Cttnbp2B9EJA2 1648 aa24.95■■□□□ 1.58
Chrna3-202ENSMUST00000214204 Esf1Q3V1V3 845 aaKnown RBP24.82■■□□□ 1.56
Chrna3-202ENSMUST00000214204 Cngb1E1AZ71 1325 aa24.79■■□□□ 1.56
Chrna3-202ENSMUST00000214204 Golga3P55937 1487 aa24.67■■□□□ 1.54
Chrna3-202ENSMUST00000214204 HrcG5E8J6 738 aa24.64■■□□□ 1.53
Chrna3-202ENSMUST00000214204 Frmpd1A2AKB4 1549 aa24.61■■□□□ 1.53
Chrna3-202ENSMUST00000214204 Wdr62Q3U3T8 1523 aa24.59■■□□□ 1.53
Chrna3-202ENSMUST00000214204 Ercc6F8VPZ5 1481 aa24.57■■□□□ 1.52
Chrna3-202ENSMUST00000214204 Top2bQ64511 1612 aa24.53■■□□□ 1.52
Chrna3-202ENSMUST00000214204 Thoc2B1AZI6 1594 aaKnown RBP24.53■■□□□ 1.52
Chrna3-202ENSMUST00000214204 Rsf1E9PWW9 1441 aaKnown RBP24.43■■□□□ 1.5
Chrna3-202ENSMUST00000214204 Chic1Q8CBW7 227 aa24.43■■□□□ 1.5
Chrna3-202ENSMUST00000214204 Ccdc88bQ4QRL3 1481 aa24.41■■□□□ 1.5
Chrna3-202ENSMUST00000214204 Cc2d2aQ8CFW7 1633 aa24.41■■□□□ 1.5
Chrna3-202ENSMUST00000214204 Unc13aQ4KUS2 1712 aa24.4■■□□□ 1.5
Chrna3-202ENSMUST00000214204 Dnajc5bQ9CQ94 199 aa24.29■■□□□ 1.48
Chrna3-202ENSMUST00000214204 Cep164Q5DU05 1446 aa24.25■■□□□ 1.47
Chrna3-202ENSMUST00000214204 Phldb1Q6PDH0 1371 aaKnown RBP24.18■■□□□ 1.46
Chrna3-202ENSMUST00000214204 Fmn1Q05860 1466 aa24.16■■□□□ 1.46
Chrna3-202ENSMUST00000214204 Fam135aQ6NS59 1506 aa24.12■■□□□ 1.45
Chrna3-202ENSMUST00000214204 Gab3Q8BSM5 595 aa24.08■■□□□ 1.45
Chrna3-202ENSMUST00000214204 Kif15Q6P9L6 1387 aa24.07■■□□□ 1.44
Chrna3-202ENSMUST00000214204 Ubl4bQ9CQ84 188 aa24.06■■□□□ 1.44
Chrna3-202ENSMUST00000214204 Lamc3Q9R0B6 1581 aa24.06■■□□□ 1.44
Chrna3-202ENSMUST00000214204 TnnQ80Z71 1560 aa24.05■■□□□ 1.44
Chrna3-202ENSMUST00000214204 Top2aQ01320 1528 aaKnown RBP23.93■■□□□ 1.42
Chrna3-202ENSMUST00000214204 Il27Q8K3I6 234 aa23.9■■□□□ 1.42
Chrna3-202ENSMUST00000214204 Cux2P70298 1426 aa23.84■■□□□ 1.41
Chrna3-202ENSMUST00000214204 Camsap1A2AHC3 1581 aa23.78■■□□□ 1.4
Chrna3-202ENSMUST00000214204 Ccdc18Q640L5 1455 aa23.7■■□□□ 1.38
Chrna3-202ENSMUST00000214204 Npm1Q61937 292 aaKnown RBP23.66■■□□□ 1.38
Chrna3-202ENSMUST00000214204 Mrc2Q64449 1479 aa23.62■■□□□ 1.37
Chrna3-202ENSMUST00000214204 Rapgef2Q8CHG7 1496 aa23.61■■□□□ 1.37
Chrna3-202ENSMUST00000214204 PtprkP35822 1457 aa23.58■■□□□ 1.37
Chrna3-202ENSMUST00000214204 Npm2Q80W85 207 aa23.55■■□□□ 1.36
Chrna3-202ENSMUST00000214204 Ehmt2Q9Z148 1263 aaKnown RBP23.55■■□□□ 1.36
Chrna3-202ENSMUST00000214204 Grin2bQ01097 1482 aa23.54■■□□□ 1.36
Chrna3-202ENSMUST00000214204 Baz1bQ9Z277 1479 aa23.54■■□□□ 1.36
Chrna3-202ENSMUST00000214204 Kif21aQ9QXL2 1672 aa23.49■■□□□ 1.35
Chrna3-202ENSMUST00000214204 LrpprcQ6PB66 1392 aaKnown RBP23.47■■□□□ 1.35
Chrna3-202ENSMUST00000214204 Cep162Q6ZQ06 1403 aa23.45■■□□□ 1.34
Chrna3-202ENSMUST00000214204 NrkQ9R0G8 1455 aa23.44■■□□□ 1.34
Chrna3-202ENSMUST00000214204 Shroom4Q1W617 1475 aa23.43■■□□□ 1.34
Chrna3-202ENSMUST00000214204 Myt1lP97500 1187 aa23.42■■□□□ 1.34
Chrna3-202ENSMUST00000214204 Dhx29Q6PGC1 1365 aaKnown RBP23.39■■□□□ 1.34
Chrna3-202ENSMUST00000214204 PogzQ8BZH4 1409 aaKnown RBP23.39■■□□□ 1.33
Chrna3-202ENSMUST00000214204 Duox2A2AQ99 1517 aa23.36■■□□□ 1.33
Chrna3-202ENSMUST00000214204 Eif4g1Q6NZJ6 1600 aaKnown RBP23.35■■□□□ 1.33
Chrna3-202ENSMUST00000214204 Arhgap35Q91YM2 1499 aa23.31■■□□□ 1.32
Chrna3-202ENSMUST00000214204 Zeb1Q64318 1117 aa23.28■■□□□ 1.32
Chrna3-202ENSMUST00000214204 Crocc2F6XLV1 1638 aa23.27■■□□□ 1.32
Chrna3-202ENSMUST00000214204 Efcab5A0JP43 1406 aa23.26■■□□□ 1.31
Chrna3-202ENSMUST00000214204 Samd9lQ69Z37 1561 aa23.23■■□□□ 1.31
Chrna3-202ENSMUST00000214204 Mroh2bQ7M6Y6 1581 aa23.18■■□□□ 1.3
Chrna3-202ENSMUST00000214204 Plb1Q3TTY0 1478 aa23.16■■□□□ 1.3
Chrna3-202ENSMUST00000214204 Rad54l2Q99NG0 1466 aa23.13■■□□□ 1.29
Chrna3-202ENSMUST00000214204 Lrriq1Q0P5X1 1673 aa23.13■■□□□ 1.29
Chrna3-202ENSMUST00000214204 Urb2E9Q7L1 1524 aaKnown RBP23.13■■□□□ 1.29
Chrna3-202ENSMUST00000214204 Map3k1P53349 1493 aa23.09■■□□□ 1.29
Chrna3-202ENSMUST00000214204 SynmQ70IV5 1561 aa23.04■■□□□ 1.28
Chrna3-202ENSMUST00000214204 Clip1Q922J3 1391 aa23.04■■□□□ 1.28
Chrna3-202ENSMUST00000214204 Disp1Q3TDN0 1521 aa22.96■■□□□ 1.27
Chrna3-202ENSMUST00000214204 Setd1bQ8CFT2 1985 aa22.96■■□□□ 1.27
Chrna3-202ENSMUST00000214204 AqrQ8CFQ3 1481 aaKnown RBP22.94■■□□□ 1.26
Chrna3-202ENSMUST00000214204 Carmil1Q6EDY6 1374 aa22.93■■□□□ 1.26
Chrna3-202ENSMUST00000214204 Magi3Q9EQJ9 1476 aa22.93■■□□□ 1.26
Chrna3-202ENSMUST00000214204 Ap3b1Q9Z1T1 1105 aa22.91■■□□□ 1.26
Chrna3-202ENSMUST00000214204 Pla2r1Q62028 1487 aa22.9■■□□□ 1.26
Chrna3-202ENSMUST00000214204 Grin2aP35436 1464 aa22.88■■□□□ 1.25
Chrna3-202ENSMUST00000214204 Cux1P53564 1515 aa22.88■■□□□ 1.25
Chrna3-202ENSMUST00000214204 Setd5Q5XJV7 1441 aa22.87■■□□□ 1.25
Chrna3-202ENSMUST00000214204 Ift140E9PY46 1464 aa22.87■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms