RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Igkv8-19A0A0G2JFN8 121 aa6.54□□□□□ -1.36
Pcdh20-202ENSMUST00000192557 Serp1Q9Z1W5 66 aa6.54□□□□□ -1.36
Pcdh20-202ENSMUST00000192557 Ryr3A2AGL3 4863 aa6.54□□□□□ -1.36
Pcdh20-202ENSMUST00000192557 Gpr15lA0A0B4J1N3 78 aa6.52□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Q8K1L6 76 aa6.52□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Chchd10Q7TNL9 138 aa6.5□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 A530084C06RikQ3UTW2 186 aa6.49□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Sox16Q62247 57 aa6.49□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Dph3Q8K0W9 82 aa6.49□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Defb12Q8K4N3 78 aa6.49□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Lrp1bQ9JI18 4599 aa6.46□□□□□ -1.37
Pcdh20-202ENSMUST00000192557 Tnp2P11378 117 aa6.46□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Defb39Q70KL3 74 aa6.46□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Gm37013Q8K491 104 aa6.46□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Pkd1O08852 4293 aa6.45□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Znf706Q9D115 76 aaKnown RBP6.43□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 ApobE9Q414 4505 aa6.42□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Spaca4Q80ZQ0 127 aa6.42□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Gm10160F6Y577 67 aa6.41□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Coa6Q8BGD8 79 aa6.4□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 RetnlbQ99P86 105 aa6.4□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Dnah2P0C6F1 4456 aa6.4□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 Cypt14J3QPF7 87 aa6.4□□□□□ -1.38
Pcdh20-202ENSMUST00000192557 A0A286YE49 62 aa6.4□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Gm10197F6QEY5 67 aa6.4□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 1700074P13RikQ9D9G7 251 aa6.39□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Fat1A0A1L1SQU7 4645 aa6.38□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Gm10267M0QWD8 85 aa6.38□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Wfdc3Q14AE4 130 aa6.38□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Defb38Q7TNV7 63 aa6.35□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Dync1h1Q9JHU4 4644 aaKnown RBP6.34□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Spint4Q9D263 159 aa6.34□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Hectd4E9Q2E4 4418 aa6.34□□□□□ -1.39
Pcdh20-202ENSMUST00000192557 Atox1O08997 68 aaKnown RBP6.33□□□□□ -1.4
Pcdh20-202ENSMUST00000192557 Cdc42se1Q8BHL7 80 aa6.33□□□□□ -1.4
Pcdh20-202ENSMUST00000192557 Gm16253D3Z167 63 aa6.32□□□□□ -1.4
Pcdh20-202ENSMUST00000192557 Coa5Q99M07 74 aa6.32□□□□□ -1.4
Pcdh20-202ENSMUST00000192557 Gm2310J3QNJ2 377 aa6.31□□□□□ -1.4
Pcdh20-202ENSMUST00000192557 Pkhd1E9PZ36 4059 aa6.27□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Defb13Q8R2I4 64 aa6.26□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Lrp1Q91ZX7 4545 aaKnown RBP6.24□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Igkv3-3A0A140T8Q0 119 aa6.24□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Cypt15B1AXS0 87 aa6.24□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Ryr2E9Q401 4966 aaKnown RBP6.22□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Chtf8P0CG14 533 aa6.21□□□□□ -1.41
Pcdh20-202ENSMUST00000192557 Ryr1E9PZQ0 5035 aa6.21□□□□□ -1.42
Pcdh20-202ENSMUST00000192557 1700042G07RikB1AUF7 90 aa6.21□□□□□ -1.42
Pcdh20-202ENSMUST00000192557 Fat2Q5F226 4351 aa6.18□□□□□ -1.42
Pcdh20-202ENSMUST00000192557 Phxr4P15974 95 aa6.15□□□□□ -1.42
Pcdh20-202ENSMUST00000192557 SacsQ9JLC8 4582 aa6.12□□□□□ -1.43
Pcdh20-202ENSMUST00000192557 Kmt2cQ8BRH4 4903 aa6.09□□□□□ -1.43
Pcdh20-202ENSMUST00000192557 4933415A04RikQ9D443 101 aa6.09□□□□□ -1.43
Pcdh20-202ENSMUST00000192557 Gm26620Q9CY65 116 aa6.09□□□□□ -1.43
Pcdh20-202ENSMUST00000192557 Abca13Q5SSE9 5034 aa6.08□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Pkhd1l1Q80ZA4 4249 aa6.08□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Gm10999F6Q4M4 69 aa6.06□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Gm9736A0A1W2P7N1 277 aa6.05□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Gm21798J3QNU5 87 aa6.05□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 SptssbQ925E8 76 aa6.04□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Gm20661K7N787 53 aa6.04□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Mycbp2Q7TPH6 4711 aa6.03□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Krtap19-5O08632 62 aa6.03□□□□□ -1.44
Pcdh20-202ENSMUST00000192557 Gm21887J3QQ04 176 aa6.01□□□□□ -1.45
Pcdh20-202ENSMUST00000192557 Q8BGJ3 129 aa6□□□□□ -1.45
Pcdh20-202ENSMUST00000192557 Prm2P07978 107 aa6□□□□□ -1.45
Pcdh20-202ENSMUST00000192557 Fat3Q8BNA6 4555 aa5.99□□□□□ -1.45
Pcdh20-202ENSMUST00000192557 Defb1P56386 69 aa5.96□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Vps13bQ80TY5 3993 aa5.96□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Kiaa1109A2AAE1 5005 aa5.96□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Herc2Q4U2R1 4836 aa5.95□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Gm11939A2A592 99 aa5.93□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Ndufb1P0DN34 57 aa5.93□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 HydinQ80W93 5154 aa5.93□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 2310034C09RikQ9D746 214 aa5.92□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Dnah8Q91XQ0 4731 aa5.92□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Gm9821Q8K076 103 aa5.9□□□□□ -1.46
Pcdh20-202ENSMUST00000192557 Gm5965D3Z724 196 aa5.9□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Gm10643Q3URG9 111 aa5.89□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Gm3646F6S692 53 aa5.89□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Krtap3-2Q9D638 99 aa5.88□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Krtap3-3Q9D7P0 99 aa5.88□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Gm4491E0CX42 125 aa5.87□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Rps29P62274 56 aa5.87□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Gm12216A0A1W2P827 62 aa5.86□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Gm20538F6Z9R1 75 aa5.85□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Ndufs5Q99LY9 106 aa5.84□□□□□ -1.47
Pcdh20-202ENSMUST00000192557 Limd2Q8BGB5 128 aa5.83□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 Krtap15-1Q9QZU5 150 aa5.83□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 Gm5767A0A0J9YTU8 78 aa5.82□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 Uqcr11Q9CPX8 56 aa5.81□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 Lrp2A2ARV4 4660 aa5.8□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 2310079G19RikQ9D6L6 185 aa5.8□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 PcloQ9QYX7 5068 aa5.78□□□□□ -1.48
Pcdh20-202ENSMUST00000192557 4930507D05RikQ8C9C9 103 aa5.77□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 D6Ertd527eA0A0N4SWI3 464 aa5.77□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 A930033H14RikG5E8X6 103 aa5.75□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 Birc6O88738 4882 aa5.74□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 Dnhd1D3Z2X2 4750 aa5.74□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 Mp68P56379 58 aa5.72□□□□□ -1.49
Pcdh20-202ENSMUST00000192557 Rnase13Q5GAM7 153 aa5.67□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms