RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Gm20538F6Z9R1 75 aa4.9□□□□□ -1.63
Cd44-208ENSMUST00000111198 Defb40Q70KL2 73 aa4.9□□□□□ -1.63
Cd44-208ENSMUST00000111198 AI606181Q8C7B9 129 aa4.9□□□□□ -1.63
Cd44-208ENSMUST00000111198 Lce1mQ9CR91 182 aa4.9□□□□□ -1.63
Cd44-208ENSMUST00000111198 Vpreb3D3Z6J4 130 aa4.89□□□□□ -1.63
Cd44-208ENSMUST00000111198 Dnah8Q91XQ0 4731 aa4.89□□□□□ -1.63
Cd44-208ENSMUST00000111198 Gm44790A0A0N4SV91 103 aa4.89□□□□□ -1.63
Cd44-208ENSMUST00000111198 Smim29Q8R043 75 aa4.89□□□□□ -1.63
Cd44-208ENSMUST00000111198 Prol1E9PYQ4 312 aa4.88□□□□□ -1.63
Cd44-208ENSMUST00000111198 Kmt2cQ8BRH4 4903 aa4.88□□□□□ -1.63
Cd44-208ENSMUST00000111198 Birc6O88738 4882 aa4.87□□□□□ -1.63
Cd44-208ENSMUST00000111198 Coa5Q99M07 74 aa4.87□□□□□ -1.63
Cd44-208ENSMUST00000111198 Ube2bP63147 152 aa4.87□□□□□ -1.63
Cd44-208ENSMUST00000111198 Defb12Q8K4N3 78 aa4.87□□□□□ -1.63
Cd44-208ENSMUST00000111198 A0A286YE49 62 aa4.85□□□□□ -1.63
Cd44-208ENSMUST00000111198 Gm10837Q3UTT8 145 aa4.85□□□□□ -1.63
Cd44-208ENSMUST00000111198 Rnase13Q5GAM7 153 aa4.85□□□□□ -1.63
Cd44-208ENSMUST00000111198 Kiaa1109A2AAE1 5005 aa4.84□□□□□ -1.63
Cd44-208ENSMUST00000111198 Krtap3-1A2A591 98 aa4.84□□□□□ -1.63
Cd44-208ENSMUST00000111198 Igkv3-10A0A0G2JGN0 119 aa4.84□□□□□ -1.64
Cd44-208ENSMUST00000111198 Igkv3-12A0A140T8P0 119 aa4.84□□□□□ -1.64
Cd44-208ENSMUST00000111198 Gm21886J3QJU9 214 aa4.84□□□□□ -1.64
Cd44-208ENSMUST00000111198 Sprr1aQ62266 144 aa4.84□□□□□ -1.64
Cd44-208ENSMUST00000111198 ApobE9Q414 4505 aa4.83□□□□□ -1.64
Cd44-208ENSMUST00000111198 Chchd10Q7TNL9 138 aa4.83□□□□□ -1.64
Cd44-208ENSMUST00000111198 Gm3646F6S692 53 aa4.82□□□□□ -1.64
Cd44-208ENSMUST00000111198 Fam168bQ80XQ8 194 aa4.82□□□□□ -1.64
Cd44-208ENSMUST00000111198 1700018G05RikA0A1B0GSI2 66 aa4.82□□□□□ -1.64
Cd44-208ENSMUST00000111198 PcloQ9QYX7 5068 aa4.81□□□□□ -1.64
Cd44-208ENSMUST00000111198 Phxr4P15974 95 aa4.8□□□□□ -1.64
Cd44-208ENSMUST00000111198 1600014C23RikQ9DAX4 101 aa4.8□□□□□ -1.64
Cd44-208ENSMUST00000111198 Reg3aO09037 175 aa4.79□□□□□ -1.64
Cd44-208ENSMUST00000111198 Gm28230A0A0A0MQ91 144 aa4.78□□□□□ -1.64
Cd44-208ENSMUST00000111198 4933415A04RikQ9D443 101 aa4.78□□□□□ -1.64
Cd44-208ENSMUST00000111198 Abca13Q5SSE9 5034 aa4.77□□□□□ -1.65
Cd44-208ENSMUST00000111198 Vps13bQ80TY5 3993 aa4.77□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm18596A0A1W2P860 280 aa4.77□□□□□ -1.65
Cd44-208ENSMUST00000111198 Ube2aQ9Z255 152 aa4.77□□□□□ -1.65
Cd44-208ENSMUST00000111198 Znf706Q9D115 76 aaKnown RBP4.76□□□□□ -1.65
Cd44-208ENSMUST00000111198 Zcchc13Q9D548 170 aa4.76□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm10065F6TJM2 114 aa4.76□□□□□ -1.65
Cd44-208ENSMUST00000111198 Krtap19-5O08632 62 aa4.75□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm26620Q9CY65 116 aa4.75□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gpr15lA0A0B4J1N3 78 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm10139O88245 57 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 2310057N15RikQ9D6T8 200 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 HydinQ80W93 5154 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 Wfdc10Q3V2J9 124 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 Wfdc13Q5DQQ6 81 aa4.74□□□□□ -1.65
Cd44-208ENSMUST00000111198 Krtap29-1A2A5X4 342 aa4.73□□□□□ -1.65
Cd44-208ENSMUST00000111198 Rpl37aP61514 92 aa4.73□□□□□ -1.65
Cd44-208ENSMUST00000111198 Odf3bQ5M8M2 238 aa4.73□□□□□ -1.65
Cd44-208ENSMUST00000111198 SycnQ8VCK7 134 aa4.73□□□□□ -1.65
Cd44-208ENSMUST00000111198 Pkhd1l1Q80ZA4 4249 aa4.73□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm10643Q3URG9 111 aa4.72□□□□□ -1.65
Cd44-208ENSMUST00000111198 Dnhd1D3Z2X2 4750 aa4.72□□□□□ -1.65
Cd44-208ENSMUST00000111198 Gm2310J3QNJ2 377 aa4.71□□□□□ -1.66
Cd44-208ENSMUST00000111198 Q8K1L6 76 aa4.71□□□□□ -1.66
Cd44-208ENSMUST00000111198 RetnlbQ99P86 105 aa4.71□□□□□ -1.66
Cd44-208ENSMUST00000111198 Igkv3-7A0A0G2JE31 119 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 Ndufb1P0DN34 57 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 Fat3Q8BNA6 4555 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 Mycbp2Q7TPH6 4711 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 Igkv3-5A0A140T8M6 119 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 Gm10267M0QWD8 85 aa4.69□□□□□ -1.66
Cd44-208ENSMUST00000111198 1700042G07RikB1AUF7 90 aa4.68□□□□□ -1.66
Cd44-208ENSMUST00000111198 SptssbQ925E8 76 aa4.67□□□□□ -1.66
Cd44-208ENSMUST00000111198 Phf5aP83870 110 aaKnown RBP4.65□□□□□ -1.66
Cd44-208ENSMUST00000111198 Gm20661K7N787 53 aa4.65□□□□□ -1.67
Cd44-208ENSMUST00000111198 Herc1E9PZP8 4859 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Lrp1Q91ZX7 4545 aaKnown RBP4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Igkv3-3A0A140T8Q0 119 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Gm27235Q3UW50 83 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Lrp1bQ9JI18 4599 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Cypt14J3QPF7 87 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Adm2Q7TNK8 150 aa4.64□□□□□ -1.67
Cd44-208ENSMUST00000111198 Fat2Q5F226 4351 aa4.63□□□□□ -1.67
Cd44-208ENSMUST00000111198 Mp68P56379 58 aa4.63□□□□□ -1.67
Cd44-208ENSMUST00000111198 Defb9Q8R2I6 67 aa4.63□□□□□ -1.67
Cd44-208ENSMUST00000111198 Krtap14O08640 167 aa4.62□□□□□ -1.67
Cd44-208ENSMUST00000111198 Limd2Q8BGB5 128 aa4.62□□□□□ -1.67
Cd44-208ENSMUST00000111198 NbdyA0A0N4SUI7 68 aa4.6□□□□□ -1.67
Cd44-208ENSMUST00000111198 Hectd4E9Q2E4 4418 aa4.59□□□□□ -1.67
Cd44-208ENSMUST00000111198 Defb38Q7TNV7 63 aa4.58□□□□□ -1.68
Cd44-208ENSMUST00000111198 D6Ertd527eA0A0N4SWI3 464 aa4.58□□□□□ -1.68
Cd44-208ENSMUST00000111198 Uqcr11Q9CPX8 56 aa4.58□□□□□ -1.68
Cd44-208ENSMUST00000111198 Gm12216A0A1W2P827 62 aa4.57□□□□□ -1.68
Cd44-208ENSMUST00000111198 6030445D17RikE9Q8F9 148 aa4.57□□□□□ -1.68
Cd44-208ENSMUST00000111198 2310034C09RikQ9D746 214 aa4.57□□□□□ -1.68
Cd44-208ENSMUST00000111198 Krtap4-2B1AQ85 167 aa4.56□□□□□ -1.68
Cd44-208ENSMUST00000111198 Gm10642Q3TWM1 71 aa4.56□□□□□ -1.68
Cd44-208ENSMUST00000111198 Lrp2A2ARV4 4660 aa4.56□□□□□ -1.68
Cd44-208ENSMUST00000111198 Gm16253D3Z167 63 aa4.53□□□□□ -1.68
Cd44-208ENSMUST00000111198 Prm1P02319 51 aa4.53□□□□□ -1.68
Cd44-208ENSMUST00000111198 Defb13Q8R2I4 64 aa4.51□□□□□ -1.69
Cd44-208ENSMUST00000111198 Gm7735D3YX18 52 aa4.5□□□□□ -1.69
Cd44-208ENSMUST00000111198 Gm21798J3QNU5 87 aa4.5□□□□□ -1.69
Cd44-208ENSMUST00000111198 HrnrQ8VHD8 2496 aa4.5□□□□□ -1.69
Cd44-208ENSMUST00000111198 Ndufs5Q99LY9 106 aa4.49□□□□□ -1.69
Cd44-208ENSMUST00000111198 A930033H14RikG5E8X6 103 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms