RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Pkhd1E9PZ36 4059 aa8.86□□□□□ -0.99
Trim11-203ENSMUST00000108810 Gm16253D3Z167 63 aa8.85□□□□□ -0.99
Trim11-203ENSMUST00000108810 Tmem258P61166 79 aa8.85□□□□□ -0.99
Trim11-203ENSMUST00000108810 Rps28P62858 69 aaKnown RBP8.83□□□□□ -1
Trim11-203ENSMUST00000108810 A0A286YE49 62 aa8.81□□□□□ -1
Trim11-203ENSMUST00000108810 Samd13D3YUG0 102 aa8.81□□□□□ -1
Trim11-203ENSMUST00000108810 Gm19935A0A1B0GSF9 52 aa8.79□□□□□ -1
Trim11-203ENSMUST00000108810 Ryr3A2AGL3 4863 aa8.78□□□□□ -1
Trim11-203ENSMUST00000108810 Fat2Q5F226 4351 aa8.74□□□□□ -1.01
Trim11-203ENSMUST00000108810 Coa6Q8BGD8 79 aa8.73□□□□□ -1.01
Trim11-203ENSMUST00000108810 Spint4Q9D263 159 aa8.72□□□□□ -1.01
Trim11-203ENSMUST00000108810 1700074P13RikQ9D9G7 251 aa8.71□□□□□ -1.02
Trim11-203ENSMUST00000108810 Wfdc3Q14AE4 130 aa8.7□□□□□ -1.02
Trim11-203ENSMUST00000108810 Igkv3-3A0A140T8Q0 119 aa8.69□□□□□ -1.02
Trim11-203ENSMUST00000108810 SnurfQ9WU12 71 aa8.69□□□□□ -1.02
Trim11-203ENSMUST00000108810 Smlr1J3QMJ4 66 aa8.69□□□□□ -1.02
Trim11-203ENSMUST00000108810 SacsQ9JLC8 4582 aa8.68□□□□□ -1.02
Trim11-203ENSMUST00000108810 Spaca4Q80ZQ0 127 aa8.66□□□□□ -1.02
Trim11-203ENSMUST00000108810 Atox1O08997 68 aaKnown RBP8.65□□□□□ -1.02
Trim11-203ENSMUST00000108810 Brk1Q91VR8 75 aa8.65□□□□□ -1.03
Trim11-203ENSMUST00000108810 H2al1aQ5M8Q2 105 aa8.64□□□□□ -1.03
Trim11-203ENSMUST00000108810 Ryr2E9Q401 4966 aaKnown RBP8.62□□□□□ -1.03
Trim11-203ENSMUST00000108810 Mrpl55Q9CZ83 127 aa8.6□□□□□ -1.03
Trim11-203ENSMUST00000108810 Pet100P0DJE0 76 aa8.6□□□□□ -1.03
Trim11-203ENSMUST00000108810 Cypt15B1AXS0 87 aa8.59□□□□□ -1.03
Trim11-203ENSMUST00000108810 Gm10267M0QWD8 85 aa8.59□□□□□ -1.03
Trim11-203ENSMUST00000108810 Defb12Q8K4N3 78 aa8.58□□□□□ -1.04
Trim11-203ENSMUST00000108810 Serp1Q9Z1W5 66 aa8.57□□□□□ -1.04
Trim11-203ENSMUST00000108810 Pkhd1l1Q80ZA4 4249 aa8.55□□□□□ -1.04
Trim11-203ENSMUST00000108810 Coa5Q99M07 74 aa8.55□□□□□ -1.04
Trim11-203ENSMUST00000108810 Chtf8P0CG14 533 aa8.54□□□□□ -1.04
Trim11-203ENSMUST00000108810 Vps13bQ80TY5 3993 aa8.52□□□□□ -1.05
Trim11-203ENSMUST00000108810 Dph3Q8K0W9 82 aa8.51□□□□□ -1.05
Trim11-203ENSMUST00000108810 RetnlbQ99P86 105 aa8.51□□□□□ -1.05
Trim11-203ENSMUST00000108810 Cdc42se1Q8BHL7 80 aa8.47□□□□□ -1.05
Trim11-203ENSMUST00000108810 Kmt2cQ8BRH4 4903 aa8.46□□□□□ -1.06
Trim11-203ENSMUST00000108810 Gm10337F7DEP7 55 aa8.46□□□□□ -1.06
Trim11-203ENSMUST00000108810 A530084C06RikQ3UTW2 186 aa8.46□□□□□ -1.06
Trim11-203ENSMUST00000108810 Defb13Q8R2I4 64 aa8.45□□□□□ -1.06
Trim11-203ENSMUST00000108810 Gm10160F6Y577 67 aa8.42□□□□□ -1.06
Trim11-203ENSMUST00000108810 Lrp1Q91ZX7 4545 aaKnown RBP8.41□□□□□ -1.06
Trim11-203ENSMUST00000108810 Rps29P62274 56 aa8.41□□□□□ -1.06
Trim11-203ENSMUST00000108810 Ryr1E9PZQ0 5035 aa8.39□□□□□ -1.07
Trim11-203ENSMUST00000108810 Defb38Q7TNV7 63 aa8.38□□□□□ -1.07
Trim11-203ENSMUST00000108810 H2al1bA0A087WP11 105 aa8.36□□□□□ -1.07
Trim11-203ENSMUST00000108810 H2al1kJ3QP08 105 aa8.36□□□□□ -1.07
Trim11-203ENSMUST00000108810 H2al1eQ810S6 105 aa8.36□□□□□ -1.07
Trim11-203ENSMUST00000108810 H2al1mQ9DAD9 105 aa8.36□□□□□ -1.07
Trim11-203ENSMUST00000108810 Gm10197F6QEY5 67 aa8.35□□□□□ -1.07
Trim11-203ENSMUST00000108810 Krtap19-5O08632 62 aa8.34□□□□□ -1.07
Trim11-203ENSMUST00000108810 Fat3Q8BNA6 4555 aa8.32□□□□□ -1.08
Trim11-203ENSMUST00000108810 Dnah8Q91XQ0 4731 aa8.32□□□□□ -1.08
Trim11-203ENSMUST00000108810 Krtap3-2Q9D638 99 aa8.31□□□□□ -1.08
Trim11-203ENSMUST00000108810 Krtap3-3Q9D7P0 99 aa8.31□□□□□ -1.08
Trim11-203ENSMUST00000108810 Gm11939A2A592 99 aa8.3□□□□□ -1.08
Trim11-203ENSMUST00000108810 Gm21798J3QNU5 87 aa8.3□□□□□ -1.08
Trim11-203ENSMUST00000108810 Gm10643Q3URG9 111 aa8.26□□□□□ -1.09
Trim11-203ENSMUST00000108810 Gm26620Q9CY65 116 aa8.26□□□□□ -1.09
Trim11-203ENSMUST00000108810 Phxr4P15974 95 aa8.24□□□□□ -1.09
Trim11-203ENSMUST00000108810 Abca13Q5SSE9 5034 aa8.2□□□□□ -1.1
Trim11-203ENSMUST00000108810 Gm10999F6Q4M4 69 aa8.19□□□□□ -1.1
Trim11-203ENSMUST00000108810 A930033H14RikG5E8X6 103 aa8.17□□□□□ -1.1
Trim11-203ENSMUST00000108810 Q8BGJ3 129 aa8.15□□□□□ -1.1
Trim11-203ENSMUST00000108810 2310079G19RikQ9D6L6 185 aa8.15□□□□□ -1.1
Trim11-203ENSMUST00000108810 Gm20661K7N787 53 aa8.15□□□□□ -1.1
Trim11-203ENSMUST00000108810 Gm9736A0A1W2P7N1 277 aa8.13□□□□□ -1.11
Trim11-203ENSMUST00000108810 2310034C09RikQ9D746 214 aa8.13□□□□□ -1.11
Trim11-203ENSMUST00000108810 Mycbp2Q7TPH6 4711 aa8.13□□□□□ -1.11
Trim11-203ENSMUST00000108810 D6Ertd527eA0A0N4SWI3 464 aa8.11□□□□□ -1.11
Trim11-203ENSMUST00000108810 Gm5767A0A0J9YTU8 78 aa8.07□□□□□ -1.12
Trim11-203ENSMUST00000108810 Gm4491E0CX42 125 aa8.07□□□□□ -1.12
Trim11-203ENSMUST00000108810 4933415A04RikQ9D443 101 aa8.05□□□□□ -1.12
Trim11-203ENSMUST00000108810 Dnhd1D3Z2X2 4750 aa8.01□□□□□ -1.13
Trim11-203ENSMUST00000108810 4930507D05RikQ8C9C9 103 aa7.99□□□□□ -1.13
Trim11-203ENSMUST00000108810 Sox16Q62247 57 aa7.98□□□□□ -1.13
Trim11-203ENSMUST00000108810 Herc2Q4U2R1 4836 aa7.98□□□□□ -1.13
Trim11-203ENSMUST00000108810 Kiaa1109A2AAE1 5005 aa7.97□□□□□ -1.13
Trim11-203ENSMUST00000108810 Gm5965D3Z724 196 aa7.97□□□□□ -1.13
Trim11-203ENSMUST00000108810 Birc6O88738 4882 aa7.96□□□□□ -1.14
Trim11-203ENSMUST00000108810 Uqcr11Q9CPX8 56 aa7.94□□□□□ -1.14
Trim11-203ENSMUST00000108810 Ndufb1P0DN34 57 aa7.92□□□□□ -1.14
Trim11-203ENSMUST00000108810 Defb1P56386 69 aa7.92□□□□□ -1.14
Trim11-203ENSMUST00000108810 Limd2Q8BGB5 128 aa7.91□□□□□ -1.14
Trim11-203ENSMUST00000108810 Rpl37Q9D823 97 aa7.86□□□□□ -1.15
Trim11-203ENSMUST00000108810 SptssbQ925E8 76 aa7.85□□□□□ -1.15
Trim11-203ENSMUST00000108810 Krtap15-1Q9QZU5 150 aa7.84□□□□□ -1.15
Trim11-203ENSMUST00000108810 HydinQ80W93 5154 aa7.84□□□□□ -1.15
Trim11-203ENSMUST00000108810 Sec61gP60060 68 aa7.83□□□□□ -1.16
Trim11-203ENSMUST00000108810 9230102O04RikA2ASX7 82 aa7.77□□□□□ -1.17
Trim11-203ENSMUST00000108810 Rnase13Q5GAM7 153 aa7.76□□□□□ -1.17
Trim11-203ENSMUST00000108810 Cox6b2Q80ZN9 88 aa7.73□□□□□ -1.17
Trim11-203ENSMUST00000108810 Gm3646F6S692 53 aa7.72□□□□□ -1.17
Trim11-203ENSMUST00000108810 Lrp2A2ARV4 4660 aa7.7□□□□□ -1.18
Trim11-203ENSMUST00000108810 1700042G07RikB1AUF7 90 aa7.69□□□□□ -1.18
Trim11-203ENSMUST00000108810 Gm9821Q8K076 103 aa7.68□□□□□ -1.18
Trim11-203ENSMUST00000108810 Gm17416Q30KP4 66 aa7.67□□□□□ -1.18
Trim11-203ENSMUST00000108810 PcloQ9QYX7 5068 aa7.6□□□□□ -1.19
Trim11-203ENSMUST00000108810 Krtap3-1A2A591 98 aa7.47□□□□□ -1.21
Trim11-203ENSMUST00000108810 2210017I01RikA0A0A6YVV1 95 aa7.46□□□□□ -1.21
Trim11-203ENSMUST00000108810 Gm10382Q3V0T5 144 aa7.46□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms