RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Birc6O88738 4882 aa5.7□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Gm20604F8WIA3 75 aa5.7□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Igkv3-3A0A140T8Q0 119 aa5.7□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Mycbp2Q7TPH6 4711 aa5.69□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 PcloQ9QYX7 5068 aa5.69□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Igkv8-19A0A0G2JFN8 121 aa5.68□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 D6Ertd527eA0A0N4SWI3 464 aa5.68□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Cypt15B1AXS0 87 aa5.67□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Samd13D3YUG0 102 aa5.67□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Pkhd1l1Q80ZA4 4249 aa5.66□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Defb13Q8R2I4 64 aa5.65□□□□□ -1.5
Ccdc38-201ENSMUST00000092215 Gm37013Q8K491 104 aa5.65□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Spink8Q09TK9 105 aa5.64□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Lrp2A2ARV4 4660 aa5.63□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Gm10267M0QWD8 85 aa5.63□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Dnhd1D3Z2X2 4750 aa5.63□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 BikO70337 150 aa5.63□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Gm5965D3Z724 196 aa5.62□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Gm2310J3QNJ2 377 aa5.61□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Fam229bQ8CF36 80 aa5.6□□□□□ -1.51
Ccdc38-201ENSMUST00000092215 Cystm1Q8K353 104 aa5.59□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 Anapc13Q8R034 74 aa5.59□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 Naa38Q9D2U5 125 aa5.59□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 GhrhP16043 103 aa5.58□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 A0A286YE49 62 aa5.57□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 Rps29P62274 56 aa5.55□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 Lce1mQ9CR91 182 aa5.54□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 Gm26620Q9CY65 116 aa5.53□□□□□ -1.52
Ccdc38-201ENSMUST00000092215 1700074P13RikQ9D9G7 251 aa5.52□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Herc1E9PZP8 4859 aa5.52□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Gm5767A0A0J9YTU8 78 aa5.51□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Atp5eP56382 52 aa5.51□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Krtap15-1Q9QZU5 150 aa5.5□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Defb38Q7TNV7 63 aa5.5□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 B230307C23RikQ8BLB2 64 aa5.47□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Gm11939A2A592 99 aa5.47□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Scgb1b2O35176 93 aa5.46□□□□□ -1.53
Ccdc38-201ENSMUST00000092215 Gm18596A0A1W2P860 280 aa5.46□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 Ndufc1Q9CQY9 76 aa5.46□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 7530416G11RikJ3QJX6 159 aa5.44□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 Gm9821Q8K076 103 aa5.44□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 4930518I15RikQ3V2W7 57 aa5.43□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 A930033H14RikG5E8X6 103 aa5.42□□□□□ -1.54
Ccdc38-201ENSMUST00000092215 Serp2Q6TAW2 65 aa5.4□□□□□ -1.55
Ccdc38-201ENSMUST00000092215 Apoc4Q61268 124 aa5.37□□□□□ -1.55
Ccdc38-201ENSMUST00000092215 Gm10999F6Q4M4 69 aa5.36□□□□□ -1.55
Ccdc38-201ENSMUST00000092215 2310057N15RikQ9D6T8 200 aa5.36□□□□□ -1.55
Ccdc38-201ENSMUST00000092215 Atox1O08997 68 aaKnown RBP5.34□□□□□ -1.55
Ccdc38-201ENSMUST00000092215 Q8BGJ3 129 aa5.34□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Rnase13Q5GAM7 153 aa5.31□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Gm4491E0CX42 125 aa5.31□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Coa6Q8BGD8 79 aa5.31□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Rpl37Q9D823 97 aa5.31□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Chtf8P0CG14 533 aa5.3□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Gm28539A0A087WSL9 92 aa5.3□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 2310034C09RikQ9D746 214 aa5.28□□□□□ -1.56
Ccdc38-201ENSMUST00000092215 Gm10160F6Y577 67 aa5.26□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Spint4Q9D263 159 aa5.25□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Krtap3-2Q9D638 99 aa5.25□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Krtap3-3Q9D7P0 99 aa5.25□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Sec61bQ9CQS8 96 aaKnown RBP5.25□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Gm21798J3QNU5 87 aa5.24□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Crct1Q6PAI5 102 aa5.22□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Ush2AQ2QI47 5193 aa5.22□□□□□ -1.57
Ccdc38-201ENSMUST00000092215 Prr13Q9CQJ5 137 aa5.21□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Defb1P56386 69 aa5.2□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Ubr4A2AN08 5180 aa5.2□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 SnurfQ9WU12 71 aa5.18□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Smlr1J3QMJ4 66 aa5.17□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 4930507D05RikQ8C9C9 103 aa5.16□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Coa5Q99M07 74 aa5.16□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Gm10318A0A1W2P728 225 aa5.16□□□□□ -1.58
Ccdc38-201ENSMUST00000092215 Pet100P0DJE0 76 aa5.15□□□□□ -1.59
Ccdc38-201ENSMUST00000092215 Prm1P02319 51 aa5.11□□□□□ -1.59
Ccdc38-201ENSMUST00000092215 Gm7735D3YX18 52 aa5.1□□□□□ -1.59
Ccdc38-201ENSMUST00000092215 Hmcn2A2AJ76 5100 aa5.1□□□□□ -1.59
Ccdc38-201ENSMUST00000092215 Gm9789Q8BIG3 52 aa5.09□□□□□ -1.59
Ccdc38-201ENSMUST00000092215 Tmem258P61166 79 aa5.08□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 4932415D10RikA0A1W2P6U8 4986 aa5.07□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 9230102O04RikA2ASX7 82 aa5.07□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 Brk1Q91VR8 75 aa5.07□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 2310079G19RikQ9D6L6 185 aa5.06□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 Fam229aB2KGE5 128 aa5.04□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 SptssbQ925E8 76 aa5.04□□□□□ -1.6
Ccdc38-201ENSMUST00000092215 Gm17416Q30KP4 66 aa5.02□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Gm19935A0A1B0GSF9 52 aa5.02□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Gm10643Q3URG9 111 aa5.01□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Gm10197F6QEY5 67 aa5□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Gm20661K7N787 53 aa5□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Smim20D3Z7Q2 69 aa4.99□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Krtap1-3A2A588 173 aa4.98□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 LorP18165 486 aa4.98□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 H2al1aQ5M8Q2 105 aa4.97□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 H2al1eQ810S6 105 aa4.97□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Cdc42se1Q8BHL7 80 aa4.96□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 Krtap16-3Q8C1I6 86 aa4.96□□□□□ -1.61
Ccdc38-201ENSMUST00000092215 ZanO88799 5376 aa4.95□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 Gm17606F6ZL36 78 aa4.94□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 Krtap13-1Q8K198 168 aa4.94□□□□□ -1.62
Ccdc38-201ENSMUST00000092215 Serp1Q9Z1W5 66 aa4.93□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms