RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 4933415A04RikQ9D443 101 aa7.08□□□□□ -1.28
Col9a1-202ENSMUST00000088349 Igkv3-3A0A140T8Q0 119 aa7.05□□□□□ -1.28
Col9a1-202ENSMUST00000088349 Gm27235Q3UW50 83 aa7.05□□□□□ -1.28
Col9a1-202ENSMUST00000088349 SptssbQ925E8 76 aa7.04□□□□□ -1.28
Col9a1-202ENSMUST00000088349 OxtP35454 125 aa7.04□□□□□ -1.28
Col9a1-202ENSMUST00000088349 Dnah7cA0A087WR13 4024 aa7.03□□□□□ -1.28
Col9a1-202ENSMUST00000088349 Sox16Q62247 57 aa7.03□□□□□ -1.28
Col9a1-202ENSMUST00000088349 Adm2Q7TNK8 150 aa7.02□□□□□ -1.29
Col9a1-202ENSMUST00000088349 PlecQ9QXS1 4691 aaKnown RBP7.02□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Gm20661K7N787 53 aa7.02□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Ly6g6cQ9Z1Q4 126 aa7□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Defb11Q8R2I7 77 aa6.99□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Stard9Q80TF6 4561 aa6.97□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Q8K1L6 76 aa6.96□□□□□ -1.29
Col9a1-202ENSMUST00000088349 Dnah7aE9Q0T8 4024 aa6.96□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Gm9918Q8BUR5 174 aa6.96□□□□□ -1.3
Col9a1-202ENSMUST00000088349 1700042G07RikB1AUF7 90 aa6.95□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Krtap10-10A0A1W2P7T6 217 aa6.95□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Wfdc3Q14AE4 130 aa6.92□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Defb13Q8R2I4 64 aa6.92□□□□□ -1.3
Col9a1-202ENSMUST00000088349 2310050C09RikG5E8Z3 280 aa6.91□□□□□ -1.3
Col9a1-202ENSMUST00000088349 AW011738F6S7Q2 159 aa6.91□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Defb39Q70KL3 74 aa6.91□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Gm21798J3QNU5 87 aa6.9□□□□□ -1.3
Col9a1-202ENSMUST00000088349 Gm10065F6TJM2 114 aa6.9□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Krtap13O88375 197 aa6.89□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Dync2h1Q45VK7 4306 aa6.88□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Gm26620Q9CY65 116 aa6.88□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Krtap29-1A2A5X4 342 aa6.87□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Cypt14J3QPF7 87 aa6.87□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Ndufb1P0DN34 57 aa6.87□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Znf706Q9D115 76 aaKnown RBP6.87□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Gm16253D3Z167 63 aa6.85□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Gm3646F6S692 53 aa6.85□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Gm2696A0A1W2P709 240 aa6.84□□□□□ -1.31
Col9a1-202ENSMUST00000088349 NbdyA0A0N4SUI7 68 aa6.84□□□□□ -1.31
Col9a1-202ENSMUST00000088349 Spaca4Q80ZQ0 127 aa6.83□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Ndufs5Q99LY9 106 aa6.81□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Krtap14O08640 167 aa6.8□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Gm10999F6Q4M4 69 aa6.8□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Cypt15B1AXS0 87 aa6.79□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Ryr3A2AGL3 4863 aa6.79□□□□□ -1.32
Col9a1-202ENSMUST00000088349 Vps13dB1ART2 4390 aa6.77□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Defb1P56386 69 aa6.77□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Gm10643Q3URG9 111 aa6.76□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Lrp1bQ9JI18 4599 aa6.75□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Hectd4E9Q2E4 4418 aa6.75□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Gpr15lA0A0B4J1N3 78 aa6.73□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Limd2Q8BGB5 128 aa6.73□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Uqcr11Q9CPX8 56 aa6.72□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Tnp2P11378 117 aa6.71□□□□□ -1.33
Col9a1-202ENSMUST00000088349 Q8BGJ3 129 aa6.71□□□□□ -1.34
Col9a1-202ENSMUST00000088349 Pkd1O08852 4293 aa6.68□□□□□ -1.34
Col9a1-202ENSMUST00000088349 Gm9821Q8K076 103 aa6.66□□□□□ -1.34
Col9a1-202ENSMUST00000088349 2310034C09RikQ9D746 214 aa6.66□□□□□ -1.34
Col9a1-202ENSMUST00000088349 RetnlbQ99P86 105 aa6.65□□□□□ -1.35
Col9a1-202ENSMUST00000088349 ApobE9Q414 4505 aa6.61□□□□□ -1.35
Col9a1-202ENSMUST00000088349 Dnah2P0C6F1 4456 aa6.56□□□□□ -1.36
Col9a1-202ENSMUST00000088349 Ryr1E9PZQ0 5035 aa6.54□□□□□ -1.36
Col9a1-202ENSMUST00000088349 2310079G19RikQ9D6L6 185 aa6.52□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Fat1A0A1L1SQU7 4645 aa6.51□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Lrp1Q91ZX7 4545 aaKnown RBP6.51□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Pkhd1E9PZ36 4059 aa6.51□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Gm12216A0A1W2P827 62 aa6.51□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Vps13bQ80TY5 3993 aa6.47□□□□□ -1.37
Col9a1-202ENSMUST00000088349 4930507D05RikQ8C9C9 103 aa6.47□□□□□ -1.37
Col9a1-202ENSMUST00000088349 Gm4491E0CX42 125 aa6.44□□□□□ -1.38
Col9a1-202ENSMUST00000088349 Fat2Q5F226 4351 aa6.43□□□□□ -1.38
Col9a1-202ENSMUST00000088349 Krtap3-2Q9D638 99 aa6.43□□□□□ -1.38
Col9a1-202ENSMUST00000088349 Krtap3-3Q9D7P0 99 aa6.43□□□□□ -1.38
Col9a1-202ENSMUST00000088349 Dync1h1Q9JHU4 4644 aaKnown RBP6.41□□□□□ -1.38
Col9a1-202ENSMUST00000088349 D6Ertd527eA0A0N4SWI3 464 aa6.41□□□□□ -1.38
Col9a1-202ENSMUST00000088349 A930033H14RikG5E8X6 103 aa6.36□□□□□ -1.39
Col9a1-202ENSMUST00000088349 Pkhd1l1Q80ZA4 4249 aa6.35□□□□□ -1.39
Col9a1-202ENSMUST00000088349 Abca13Q5SSE9 5034 aa6.34□□□□□ -1.39
Col9a1-202ENSMUST00000088349 Ryr2E9Q401 4966 aaKnown RBP6.33□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Gm3880A0A1B0GSB3 72 aa6.33□□□□□ -1.4
Col9a1-202ENSMUST00000088349 SacsQ9JLC8 4582 aa6.33□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Kmt2cQ8BRH4 4903 aa6.31□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Gm20538F6Z9R1 75 aa6.31□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Fat3Q8BNA6 4555 aa6.29□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Mycbp2Q7TPH6 4711 aa6.29□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Gm9736A0A1W2P7N1 277 aa6.29□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Mp68P56379 58 aa6.28□□□□□ -1.4
Col9a1-202ENSMUST00000088349 Gm20537G3UYK7 97 aa6.26□□□□□ -1.41
Col9a1-202ENSMUST00000088349 Gm11939A2A592 99 aa6.26□□□□□ -1.41
Col9a1-202ENSMUST00000088349 Pla2g10Q9QXX3 151 aa6.26□□□□□ -1.41
Col9a1-202ENSMUST00000088349 CriptO70333 101 aa6.22□□□□□ -1.41
Col9a1-202ENSMUST00000088349 HydinQ80W93 5154 aa6.21□□□□□ -1.41
Col9a1-202ENSMUST00000088349 Cox6b2Q80ZN9 88 aa6.21□□□□□ -1.42
Col9a1-202ENSMUST00000088349 Prm2P07978 107 aa6.17□□□□□ -1.42
Col9a1-202ENSMUST00000088349 Rps29P62274 56 aa6.13□□□□□ -1.43
Col9a1-202ENSMUST00000088349 PcloQ9QYX7 5068 aa6.13□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Kiaa1109A2AAE1 5005 aa6.13□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Gm5965D3Z724 196 aa6.12□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Herc2Q4U2R1 4836 aa6.12□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Krtap15-1Q9QZU5 150 aa6.11□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Gm10382Q3V0T5 144 aa6.11□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Romo1P60603 79 aa6.09□□□□□ -1.43
Col9a1-202ENSMUST00000088349 Gm5767A0A0J9YTU8 78 aa6.07□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms