RNA–Protein interactions for RNA: ENSMUST00000063717.13

Phtf1-202, Transcript of Putative homeodomain transcription factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Phtf1, Length 3,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1-202ENSMUST00000063717 Gm10065F6TJM2 114 aa9.69□□□□□ -0.86
Phtf1-202ENSMUST00000063717 Znf706Q9D115 76 aaKnown RBP9.67□□□□□ -0.86
Phtf1-202ENSMUST00000063717 Defb13Q8R2I4 64 aa9.65□□□□□ -0.86
Phtf1-202ENSMUST00000063717 Cypt14J3QPF7 87 aa9.65□□□□□ -0.86
Phtf1-202ENSMUST00000063717 Gm17349F7BGH6 99 aa9.64□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Gm9507D3Z5T3 223 aa9.64□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Gm21798J3QNU5 87 aa9.63□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Krtap29-1A2A5X4 342 aa9.62□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Gm16253D3Z167 63 aa9.62□□□□□ -0.87
Phtf1-202ENSMUST00000063717 1600014C23RikQ9DAX4 101 aa9.62□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Gm3646F6S692 53 aa9.62□□□□□ -0.87
Phtf1-202ENSMUST00000063717 FcgbpE9Q0B5 2583 aa9.61□□□□□ -0.87
Phtf1-202ENSMUST00000063717 Dnah9B1AR51 4484 aa9.6□□□□□ -0.87
Phtf1-202ENSMUST00000063717 NbdyA0A0N4SUI7 68 aa9.58□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Gm10643Q3URG9 111 aa9.57□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Defb39Q70KL3 74 aa9.55□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Gm26620Q9CY65 116 aa9.55□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Defb1P56386 69 aa9.54□□□□□ -0.88
Phtf1-202ENSMUST00000063717 1700042G07RikB1AUF7 90 aa9.54□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Krtap10-4Q08EG8 221 aa9.53□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Ccdc179J3QM76 67 aa9.53□□□□□ -0.88
Phtf1-202ENSMUST00000063717 Limd2Q8BGB5 128 aa9.52□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Dnah5Q8VHE6 4621 aa9.51□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Cypt15B1AXS0 87 aa9.49□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Huwe1Q7TMY8 4377 aaKnown RBP9.49□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Uqcr11Q9CPX8 56 aa9.49□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Spaca4Q80ZQ0 127 aa9.47□□□□□ -0.89
Phtf1-202ENSMUST00000063717 Gm10999F6Q4M4 69 aa9.45□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Krtap13O88375 197 aa9.44□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Krtap14O08640 167 aa9.44□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Fras1Q80T14 4010 aa9.42□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Tnp2P11378 117 aa9.41□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Gpr15lA0A0B4J1N3 78 aa9.41□□□□□ -0.9
Phtf1-202ENSMUST00000063717 Dync2h1Q45VK7 4306 aa9.4□□□□□ -0.9
Phtf1-202ENSMUST00000063717 2310050C09RikG5E8Z3 280 aa9.35□□□□□ -0.91
Phtf1-202ENSMUST00000063717 Q8BGJ3 129 aa9.34□□□□□ -0.91
Phtf1-202ENSMUST00000063717 Dnah7cA0A087WR13 4024 aa9.34□□□□□ -0.91
Phtf1-202ENSMUST00000063717 OxtP35454 125 aa9.33□□□□□ -0.92
Phtf1-202ENSMUST00000063717 Ly6g6cQ9Z1Q4 126 aa9.32□□□□□ -0.92
Phtf1-202ENSMUST00000063717 Gm9918Q8BUR5 174 aa9.32□□□□□ -0.92
Phtf1-202ENSMUST00000063717 2310034C09RikQ9D746 214 aa9.31□□□□□ -0.92
Phtf1-202ENSMUST00000063717 PlecQ9QXS1 4691 aaKnown RBP9.28□□□□□ -0.92
Phtf1-202ENSMUST00000063717 Krtap10-10A0A1W2P7T6 217 aa9.27□□□□□ -0.93
Phtf1-202ENSMUST00000063717 PrkdcP97313 4128 aa9.26□□□□□ -0.93
Phtf1-202ENSMUST00000063717 Gm9821Q8K076 103 aa9.23□□□□□ -0.93
Phtf1-202ENSMUST00000063717 TnxbO35452 4006 aa9.22□□□□□ -0.93
Phtf1-202ENSMUST00000063717 Stard9Q80TF6 4561 aa9.18□□□□□ -0.94
Phtf1-202ENSMUST00000063717 Dnah7aE9Q0T8 4024 aa9.15□□□□□ -0.94
Phtf1-202ENSMUST00000063717 2310079G19RikQ9D6L6 185 aa9.14□□□□□ -0.95
Phtf1-202ENSMUST00000063717 4930507D05RikQ8C9C9 103 aa9.09□□□□□ -0.95
Phtf1-202ENSMUST00000063717 Hectd4E9Q2E4 4418 aa9.09□□□□□ -0.95
Phtf1-202ENSMUST00000063717 Gm2696A0A1W2P709 240 aa9.06□□□□□ -0.96
Phtf1-202ENSMUST00000063717 Defb11Q8R2I7 77 aa9.02□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Krtap3-2Q9D638 99 aa9.01□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Krtap3-3Q9D7P0 99 aa9.01□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Gm4491E0CX42 125 aa8.99□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Dnah2P0C6F1 4456 aa8.99□□□□□ -0.97
Phtf1-202ENSMUST00000063717 D6Ertd527eA0A0N4SWI3 464 aa8.98□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Vps13dB1ART2 4390 aa8.97□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Lrp1bQ9JI18 4599 aa8.97□□□□□ -0.97
Phtf1-202ENSMUST00000063717 CriptO70333 101 aa8.97□□□□□ -0.97
Phtf1-202ENSMUST00000063717 A930033H14RikG5E8X6 103 aa8.97□□□□□ -0.97
Phtf1-202ENSMUST00000063717 Gm3880A0A1B0GSB3 72 aa8.92□□□□□ -0.98
Phtf1-202ENSMUST00000063717 Pkd1O08852 4293 aa8.89□□□□□ -0.99
Phtf1-202ENSMUST00000063717 Pla2g10Q9QXX3 151 aa8.89□□□□□ -0.99
Phtf1-202ENSMUST00000063717 RetnlbQ99P86 105 aa8.88□□□□□ -0.99
Phtf1-202ENSMUST00000063717 Vps13bQ80TY5 3993 aa8.84□□□□□ -0.99
Phtf1-202ENSMUST00000063717 Gm12216A0A1W2P827 62 aa8.83□□□□□ -1
Phtf1-202ENSMUST00000063717 ApobE9Q414 4505 aa8.83□□□□□ -1
Phtf1-202ENSMUST00000063717 Gm20537G3UYK7 97 aa8.75□□□□□ -1.01
Phtf1-202ENSMUST00000063717 Gm11939A2A592 99 aa8.74□□□□□ -1.01
Phtf1-202ENSMUST00000063717 Cox6b2Q80ZN9 88 aa8.72□□□□□ -1.01
Phtf1-202ENSMUST00000063717 Rps29P62274 56 aa8.69□□□□□ -1.02
Phtf1-202ENSMUST00000063717 Pkhd1E9PZ36 4059 aa8.68□□□□□ -1.02
Phtf1-202ENSMUST00000063717 SacsQ9JLC8 4582 aa8.62□□□□□ -1.03
Phtf1-202ENSMUST00000063717 Lrp1Q91ZX7 4545 aaKnown RBP8.6□□□□□ -1.03
Phtf1-202ENSMUST00000063717 Fat2Q5F226 4351 aa8.58□□□□□ -1.04
Phtf1-202ENSMUST00000063717 Gm9955Q8CEJ8 102 aa8.52□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Gm5767A0A0J9YTU8 78 aa8.51□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Fat1A0A1L1SQU7 4645 aa8.49□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Gm17606F6ZL36 78 aa8.49□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Gm10382Q3V0T5 144 aa8.49□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Ryr3A2AGL3 4863 aa8.47□□□□□ -1.05
Phtf1-202ENSMUST00000063717 Mp68P56379 58 aa8.43□□□□□ -1.06
Phtf1-202ENSMUST00000063717 Dync1h1Q9JHU4 4644 aaKnown RBP8.42□□□□□ -1.06
Phtf1-202ENSMUST00000063717 Gm9736A0A1W2P7N1 277 aa8.42□□□□□ -1.06
Phtf1-202ENSMUST00000063717 Rnase13Q5GAM7 153 aa8.41□□□□□ -1.06
Phtf1-202ENSMUST00000063717 Pkhd1l1Q80ZA4 4249 aa8.38□□□□□ -1.07
Phtf1-202ENSMUST00000063717 Fat3Q8BNA6 4555 aa8.36□□□□□ -1.07
Phtf1-202ENSMUST00000063717 Krtap15-1Q9QZU5 150 aa8.36□□□□□ -1.07
Phtf1-202ENSMUST00000063717 Romo1P60603 79 aa8.34□□□□□ -1.07
Phtf1-202ENSMUST00000063717 Rpl37Q9D823 97 aa8.32□□□□□ -1.08
Phtf1-202ENSMUST00000063717 Gm5965D3Z724 196 aa8.27□□□□□ -1.09
Phtf1-202ENSMUST00000063717 Mycbp2Q7TPH6 4711 aa8.27□□□□□ -1.09
Phtf1-202ENSMUST00000063717 Gm20538F6Z9R1 75 aa8.23□□□□□ -1.09
Phtf1-202ENSMUST00000063717 Krtap19-5O08632 62 aa8.17□□□□□ -1.1
Phtf1-202ENSMUST00000063717 Krtap3-1A2A591 98 aa8.13□□□□□ -1.11
Phtf1-202ENSMUST00000063717 Abca13Q5SSE9 5034 aa8.12□□□□□ -1.11
Phtf1-202ENSMUST00000063717 Gm21887J3QQ04 176 aa8.11□□□□□ -1.11
Phtf1-202ENSMUST00000063717 Gm17416Q30KP4 66 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms