RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Dnah7aE9Q0T8 4024 aa4.45□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Chtf8P0CG14 533 aa4.45□□□□□ -1.7
Clrn1-202ENSMUST00000055636 AW011738F6S7Q2 159 aa4.44□□□□□ -1.7
Clrn1-202ENSMUST00000055636 1700012A03RikQ9DAF1 130 aa4.44□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Dnah7cA0A087WR13 4024 aa4.43□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Gm2310J3QNJ2 377 aa4.42□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Gm10139O88245 57 aa4.42□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Krtap4-1Q3UUY3 169 aa4.42□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Gm10267M0QWD8 85 aa4.42□□□□□ -1.7
Clrn1-202ENSMUST00000055636 2310034C09RikQ9D746 214 aa4.41□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Igkv3-7A0A0G2JE31 119 aa4.41□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Gm3646F6S692 53 aa4.41□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Cypt14J3QPF7 87 aa4.41□□□□□ -1.7
Clrn1-202ENSMUST00000055636 1600014C23RikQ9DAX4 101 aa4.4□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Stard9Q80TF6 4561 aa4.39□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Chchd10Q7TNL9 138 aa4.39□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Defb9Q8R2I6 67 aa4.39□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Defb38Q7TNV7 63 aa4.38□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Gm2696A0A1W2P709 240 aa4.37□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Igkv3-3A0A140T8Q0 119 aa4.36□□□□□ -1.71
Clrn1-202ENSMUST00000055636 A0A1Y7VJH8 109 aa4.36□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Gm10642Q3TWM1 71 aa4.35□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Cypt15B1AXS0 87 aa4.34□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Gm9821Q8K076 103 aa4.34□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Vps13dB1ART2 4390 aa4.34□□□□□ -1.71
Clrn1-202ENSMUST00000055636 Gm20661K7N787 53 aa4.34□□□□□ -1.72
Clrn1-202ENSMUST00000055636 6030445D17RikE9Q8F9 148 aa4.33□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Wfdc10Q3V2J9 124 aa4.33□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Adm2Q7TNK8 150 aa4.33□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Sec61bQ9CQS8 96 aaKnown RBP4.33□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Krtap13O88375 197 aa4.32□□□□□ -1.72
Clrn1-202ENSMUST00000055636 SptssbQ925E8 76 aa4.32□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Anapc11Q9CPX9 84 aa4.32□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Ndufs5Q99LY9 106 aa4.31□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Gm20538F6Z9R1 75 aa4.3□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Igkv3-5A0A140T8M6 119 aa4.3□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Krtap29-1A2A5X4 342 aa4.3□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Gm10065F6TJM2 114 aa4.3□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Ryr3A2AGL3 4863 aa4.29□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Gm12216A0A1W2P827 62 aa4.28□□□□□ -1.72
Clrn1-202ENSMUST00000055636 Gm27235Q3UW50 83 aa4.27□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Ndufb1P0DN34 57 aa4.26□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Pkd1O08852 4293 aa4.26□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Krtap14O08640 167 aa4.26□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Limd2Q8BGB5 128 aa4.26□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Gm21798J3QNU5 87 aa4.25□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Prm2P07978 107 aa4.24□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Krtap28-10A0A1Y7VP58 119 aa4.24□□□□□ -1.73
Clrn1-202ENSMUST00000055636 NbdyA0A0N4SUI7 68 aa4.23□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Lrp1bQ9JI18 4599 aa4.22□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Gpr15lA0A0B4J1N3 78 aa4.22□□□□□ -1.73
Clrn1-202ENSMUST00000055636 Pla2g10Q9QXX3 151 aa4.21□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Gm16253D3Z167 63 aa4.2□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Q8K1L6 76 aa4.19□□□□□ -1.74
Clrn1-202ENSMUST00000055636 ApobE9Q414 4505 aa4.19□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Q8BGJ3 129 aa4.19□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Fat1A0A1L1SQU7 4645 aa4.19□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Tnp2P11378 117 aa4.18□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Dnah2P0C6F1 4456 aa4.18□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Defb39Q70KL3 74 aa4.18□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Hectd4E9Q2E4 4418 aa4.18□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Uqcr11Q9CPX8 56 aa4.18□□□□□ -1.74
Clrn1-202ENSMUST00000055636 RetnlbQ99P86 105 aa4.16□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Pkhd1E9PZ36 4059 aa4.16□□□□□ -1.74
Clrn1-202ENSMUST00000055636 Spaca4Q80ZQ0 127 aa4.15□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Gm11563B1AQ90 168 aa4.14□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Defb13Q8R2I4 64 aa4.14□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Krtap4-7Q9D732 168 aa4.14□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Mp68P56379 58 aa4.13□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Wfdc3Q14AE4 130 aa4.13□□□□□ -1.75
Clrn1-202ENSMUST00000055636 A0A1Y7VLE6 161 aa4.13□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Znf706Q9D115 76 aaKnown RBP4.13□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Dync1h1Q9JHU4 4644 aaKnown RBP4.12□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Gm11555B1AQ89 175 aa4.11□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Gm10999F6Q4M4 69 aa4.11□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Lrp1Q91ZX7 4545 aaKnown RBP4.1□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Defb1P56386 69 aa4.09□□□□□ -1.75
Clrn1-202ENSMUST00000055636 Krtap28-13A0A087WQP5 138 aa4.07□□□□□ -1.76
Clrn1-202ENSMUST00000055636 Ryr1E9PZQ0 5035 aa4.06□□□□□ -1.76
Clrn1-202ENSMUST00000055636 2210017I01RikA0A0A6YVV1 95 aa4.06□□□□□ -1.76
Clrn1-202ENSMUST00000055636 2310079G19RikQ9D6L6 185 aa4.06□□□□□ -1.76
Clrn1-202ENSMUST00000055636 Ryr2E9Q401 4966 aaKnown RBP4.05□□□□□ -1.76
Clrn1-202ENSMUST00000055636 Fat2Q5F226 4351 aa4.05□□□□□ -1.76
Clrn1-202ENSMUST00000055636 Kmt2cQ8BRH4 4903 aa4.04□□□□□ -1.76
Clrn1-202ENSMUST00000055636 Pkhd1l1Q80ZA4 4249 aa4.02□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Romo1P60603 79 aa4.02□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Abca13Q5SSE9 5034 aa4.01□□□□□ -1.77
Clrn1-202ENSMUST00000055636 SacsQ9JLC8 4582 aa4□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Krtap3-2Q9D638 99 aa4□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Krtap3-3Q9D7P0 99 aa4□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Gm9736A0A1W2P7N1 277 aa3.97□□□□□ -1.77
Clrn1-202ENSMUST00000055636 Mycbp2Q7TPH6 4711 aa3.96□□□□□ -1.78
Clrn1-202ENSMUST00000055636 D6Ertd527eA0A0N4SWI3 464 aa3.96□□□□□ -1.78
Clrn1-202ENSMUST00000055636 A930033H14RikG5E8X6 103 aa3.96□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Krtap15-1Q9QZU5 150 aa3.95□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Krtap19-5O08632 62 aa3.94□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Vps13bQ80TY5 3993 aa3.94□□□□□ -1.78
Clrn1-202ENSMUST00000055636 A030005L19RikA0A1Y7VIU2 113 aa3.93□□□□□ -1.78
Clrn1-202ENSMUST00000055636 Fat3Q8BNA6 4555 aa3.93□□□□□ -1.78
Clrn1-202ENSMUST00000055636 4930507D05RikQ8C9C9 103 aa3.93□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms