RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 1700012A03RikQ9DAF1 130 aa8.88□□□□□ -0.99
Msx3-201ENSMUST00000055353 Igkv3-5A0A140T8M6 119 aa8.87□□□□□ -0.99
Msx3-201ENSMUST00000055353 Gm9507D3Z5T3 223 aa8.87□□□□□ -0.99
Msx3-201ENSMUST00000055353 Chtf8P0CG14 533 aa8.87□□□□□ -0.99
Msx3-201ENSMUST00000055353 Ndufs5Q99LY9 106 aa8.86□□□□□ -0.99
Msx3-201ENSMUST00000055353 Defb38Q7TNV7 63 aa8.85□□□□□ -0.99
Msx3-201ENSMUST00000055353 Spata3Q9D9T6 193 aa8.84□□□□□ -0.99
Msx3-201ENSMUST00000055353 PrkdcP97313 4128 aa8.83□□□□□ -1
Msx3-201ENSMUST00000055353 Anapc11Q9CPX9 84 aa8.83□□□□□ -1
Msx3-201ENSMUST00000055353 Fras1Q80T14 4010 aa8.82□□□□□ -1
Msx3-201ENSMUST00000055353 AW011738F6S7Q2 159 aa8.81□□□□□ -1
Msx3-201ENSMUST00000055353 Mp68P56379 58 aa8.81□□□□□ -1
Msx3-201ENSMUST00000055353 Gm27235Q3UW50 83 aa8.81□□□□□ -1
Msx3-201ENSMUST00000055353 Znf706Q9D115 76 aaKnown RBP8.8□□□□□ -1
Msx3-201ENSMUST00000055353 SptssbQ925E8 76 aa8.79□□□□□ -1
Msx3-201ENSMUST00000055353 Dnah5Q8VHE6 4621 aa8.79□□□□□ -1
Msx3-201ENSMUST00000055353 TnxbO35452 4006 aa8.78□□□□□ -1
Msx3-201ENSMUST00000055353 PlecQ9QXS1 4691 aaKnown RBP8.74□□□□□ -1.01
Msx3-201ENSMUST00000055353 Dnah7cA0A087WR13 4024 aa8.74□□□□□ -1.01
Msx3-201ENSMUST00000055353 Prm2P07978 107 aa8.72□□□□□ -1.01
Msx3-201ENSMUST00000055353 Gm9918Q8BUR5 174 aa8.72□□□□□ -1.01
Msx3-201ENSMUST00000055353 Krtap29-1A2A5X4 342 aa8.71□□□□□ -1.01
Msx3-201ENSMUST00000055353 Gm10065F6TJM2 114 aa8.71□□□□□ -1.01
Msx3-201ENSMUST00000055353 Ndufb1P0DN34 57 aa8.71□□□□□ -1.01
Msx3-201ENSMUST00000055353 Adm2Q7TNK8 150 aa8.71□□□□□ -1.01
Msx3-201ENSMUST00000055353 Gm21887J3QQ04 176 aa8.7□□□□□ -1.02
Msx3-201ENSMUST00000055353 1600014C23RikQ9DAX4 101 aa8.68□□□□□ -1.02
Msx3-201ENSMUST00000055353 Q8K1L6 76 aa8.67□□□□□ -1.02
Msx3-201ENSMUST00000055353 Gm11939A2A592 99 aa8.65□□□□□ -1.02
Msx3-201ENSMUST00000055353 Limd2Q8BGB5 128 aa8.65□□□□□ -1.02
Msx3-201ENSMUST00000055353 Krtap10-4Q08EG8 221 aa8.65□□□□□ -1.02
Msx3-201ENSMUST00000055353 Dnah7aE9Q0T8 4024 aa8.64□□□□□ -1.03
Msx3-201ENSMUST00000055353 Q8BGJ3 129 aa8.63□□□□□ -1.03
Msx3-201ENSMUST00000055353 Gm4707V9GXN5 68 aa8.63□□□□□ -1.03
Msx3-201ENSMUST00000055353 NbdyA0A0N4SUI7 68 aa8.62□□□□□ -1.03
Msx3-201ENSMUST00000055353 Gm16253D3Z167 63 aa8.6□□□□□ -1.03
Msx3-201ENSMUST00000055353 Gm20661K7N787 53 aa8.6□□□□□ -1.03
Msx3-201ENSMUST00000055353 Krtap14O08640 167 aa8.58□□□□□ -1.04
Msx3-201ENSMUST00000055353 Stard9Q80TF6 4561 aa8.57□□□□□ -1.04
Msx3-201ENSMUST00000055353 Hectd4E9Q2E4 4418 aa8.57□□□□□ -1.04
Msx3-201ENSMUST00000055353 2310050C09RikG5E8Z3 280 aa8.55□□□□□ -1.04
Msx3-201ENSMUST00000055353 Gm21798J3QNU5 87 aa8.55□□□□□ -1.04
Msx3-201ENSMUST00000055353 Defb39Q70KL3 74 aa8.54□□□□□ -1.04
Msx3-201ENSMUST00000055353 Tnp2P11378 117 aa8.53□□□□□ -1.04
Msx3-201ENSMUST00000055353 Krtap13O88375 197 aa8.52□□□□□ -1.05
Msx3-201ENSMUST00000055353 Defb13Q8R2I4 64 aa8.49□□□□□ -1.05
Msx3-201ENSMUST00000055353 Wfdc3Q14AE4 130 aa8.48□□□□□ -1.05
Msx3-201ENSMUST00000055353 Spaca4Q80ZQ0 127 aa8.48□□□□□ -1.05
Msx3-201ENSMUST00000055353 Vps13dB1ART2 4390 aa8.48□□□□□ -1.05
Msx3-201ENSMUST00000055353 Gpr15lA0A0B4J1N3 78 aa8.48□□□□□ -1.05
Msx3-201ENSMUST00000055353 Ly6g6cQ9Z1Q4 126 aa8.47□□□□□ -1.05
Msx3-201ENSMUST00000055353 Pkd1O08852 4293 aa8.44□□□□□ -1.06
Msx3-201ENSMUST00000055353 Dnah2P0C6F1 4456 aa8.44□□□□□ -1.06
Msx3-201ENSMUST00000055353 Romo1P60603 79 aa8.43□□□□□ -1.06
Msx3-201ENSMUST00000055353 FcgbpE9Q0B5 2583 aa8.43□□□□□ -1.06
Msx3-201ENSMUST00000055353 Pla2g10Q9QXX3 151 aa8.43□□□□□ -1.06
Msx3-201ENSMUST00000055353 Lrp1bQ9JI18 4599 aa8.41□□□□□ -1.06
Msx3-201ENSMUST00000055353 Krtap10-10A0A1W2P7T6 217 aa8.4□□□□□ -1.06
Msx3-201ENSMUST00000055353 Gm10999F6Q4M4 69 aa8.35□□□□□ -1.07
Msx3-201ENSMUST00000055353 Uqcr11Q9CPX8 56 aa8.34□□□□□ -1.07
Msx3-201ENSMUST00000055353 Gm2696A0A1W2P709 240 aa8.31□□□□□ -1.08
Msx3-201ENSMUST00000055353 ApobE9Q414 4505 aa8.3□□□□□ -1.08
Msx3-201ENSMUST00000055353 Pkhd1E9PZ36 4059 aa8.3□□□□□ -1.08
Msx3-201ENSMUST00000055353 Defb1P56386 69 aa8.28□□□□□ -1.08
Msx3-201ENSMUST00000055353 Defb11Q8R2I7 77 aa8.25□□□□□ -1.09
Msx3-201ENSMUST00000055353 2310079G19RikQ9D6L6 185 aa8.18□□□□□ -1.1
Msx3-201ENSMUST00000055353 Krtap3-2Q9D638 99 aa8.15□□□□□ -1.1
Msx3-201ENSMUST00000055353 Krtap3-3Q9D7P0 99 aa8.15□□□□□ -1.1
Msx3-201ENSMUST00000055353 Fat2Q5F226 4351 aa8.08□□□□□ -1.12
Msx3-201ENSMUST00000055353 Sec61bQ9CQS8 96 aaKnown RBP8.07□□□□□ -1.12
Msx3-201ENSMUST00000055353 Fat1A0A1L1SQU7 4645 aa8.05□□□□□ -1.12
Msx3-201ENSMUST00000055353 SacsQ9JLC8 4582 aa8.03□□□□□ -1.12
Msx3-201ENSMUST00000055353 RetnlbQ99P86 105 aa8.03□□□□□ -1.12
Msx3-201ENSMUST00000055353 A930033H14RikG5E8X6 103 aa8.01□□□□□ -1.13
Msx3-201ENSMUST00000055353 Gm4491E0CX42 125 aa8□□□□□ -1.13
Msx3-201ENSMUST00000055353 D6Ertd527eA0A0N4SWI3 464 aa7.99□□□□□ -1.13
Msx3-201ENSMUST00000055353 4930507D05RikQ8C9C9 103 aa7.96□□□□□ -1.13
Msx3-201ENSMUST00000055353 Dync1h1Q9JHU4 4644 aaKnown RBP7.93□□□□□ -1.14
Msx3-201ENSMUST00000055353 Ryr3A2AGL3 4863 aa7.93□□□□□ -1.14
Msx3-201ENSMUST00000055353 Vps13bQ80TY5 3993 aa7.92□□□□□ -1.14
Msx3-201ENSMUST00000055353 Ndufaf8A2AMZ4 74 aa7.91□□□□□ -1.14
Msx3-201ENSMUST00000055353 Pkhd1l1Q80ZA4 4249 aa7.9□□□□□ -1.15
Msx3-201ENSMUST00000055353 Lrp1Q91ZX7 4545 aaKnown RBP7.89□□□□□ -1.15
Msx3-201ENSMUST00000055353 Rnase13Q5GAM7 153 aa7.81□□□□□ -1.16
Msx3-201ENSMUST00000055353 Rps29P62274 56 aa7.77□□□□□ -1.17
Msx3-201ENSMUST00000055353 Gm20537G3UYK7 97 aa7.75□□□□□ -1.17
Msx3-201ENSMUST00000055353 Cox6b2Q80ZN9 88 aa7.71□□□□□ -1.17
Msx3-201ENSMUST00000055353 Gm3880A0A1B0GSB3 72 aa7.71□□□□□ -1.18
Msx3-201ENSMUST00000055353 Gm9736A0A1W2P7N1 277 aa7.69□□□□□ -1.18
Msx3-201ENSMUST00000055353 Kmt2cQ8BRH4 4903 aa7.68□□□□□ -1.18
Msx3-201ENSMUST00000055353 Gm9112A2AI92 75 aa7.66□□□□□ -1.18
Msx3-201ENSMUST00000055353 Mycbp2Q7TPH6 4711 aa7.63□□□□□ -1.19
Msx3-201ENSMUST00000055353 Gm5767A0A0J9YTU8 78 aa7.62□□□□□ -1.19
Msx3-201ENSMUST00000055353 Krtap19-5O08632 62 aa7.57□□□□□ -1.2
Msx3-201ENSMUST00000055353 Abca13Q5SSE9 5034 aa7.57□□□□□ -1.2
Msx3-201ENSMUST00000055353 Gm10382Q3V0T5 144 aa7.56□□□□□ -1.2
Msx3-201ENSMUST00000055353 Gm5965D3Z724 196 aa7.55□□□□□ -1.2
Msx3-201ENSMUST00000055353 2310057N15RikQ9D6T8 200 aa7.54□□□□□ -1.2
Msx3-201ENSMUST00000055353 Fat3Q8BNA6 4555 aa7.53□□□□□ -1.2
Msx3-201ENSMUST00000055353 Krtap15-1Q9QZU5 150 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms