RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm17349F7BGH6 99 aa8□□□□□ -1.13
Nup88-201ENSMUST00000035283 Krtap29-1A2A5X4 342 aa7.99□□□□□ -1.13
Nup88-201ENSMUST00000035283 Adm2Q7TNK8 150 aa7.99□□□□□ -1.13
Nup88-201ENSMUST00000035283 PrkdcP97313 4128 aa7.98□□□□□ -1.13
Nup88-201ENSMUST00000035283 Dnah7cA0A087WR13 4024 aa7.98□□□□□ -1.13
Nup88-201ENSMUST00000035283 Fras1Q80T14 4010 aa7.98□□□□□ -1.13
Nup88-201ENSMUST00000035283 Gm16253D3Z167 63 aa7.98□□□□□ -1.13
Nup88-201ENSMUST00000035283 1700042G07RikB1AUF7 90 aa7.97□□□□□ -1.13
Nup88-201ENSMUST00000035283 Cypt14J3QPF7 87 aa7.97□□□□□ -1.13
Nup88-201ENSMUST00000035283 Ndufb1P0DN34 57 aa7.97□□□□□ -1.13
Nup88-201ENSMUST00000035283 Gm26620Q9CY65 116 aa7.97□□□□□ -1.13
Nup88-201ENSMUST00000035283 Dnah5Q8VHE6 4621 aa7.97□□□□□ -1.13
Nup88-201ENSMUST00000035283 Gm9507D3Z5T3 223 aa7.96□□□□□ -1.13
Nup88-201ENSMUST00000035283 Defb10Q8R2I8 73 aa7.95□□□□□ -1.14
Nup88-201ENSMUST00000035283 Gm10643Q3URG9 111 aa7.93□□□□□ -1.14
Nup88-201ENSMUST00000035283 NbdyA0A0N4SUI7 68 aa7.92□□□□□ -1.14
Nup88-201ENSMUST00000035283 Defb13Q8R2I4 64 aa7.91□□□□□ -1.14
Nup88-201ENSMUST00000035283 Znf706Q9D115 76 aaKnown RBP7.91□□□□□ -1.14
Nup88-201ENSMUST00000035283 1600014C23RikQ9DAX4 101 aa7.91□□□□□ -1.14
Nup88-201ENSMUST00000035283 PlecQ9QXS1 4691 aaKnown RBP7.91□□□□□ -1.14
Nup88-201ENSMUST00000035283 Ccdc179J3QM76 67 aa7.89□□□□□ -1.15
Nup88-201ENSMUST00000035283 TnxbO35452 4006 aa7.88□□□□□ -1.15
Nup88-201ENSMUST00000035283 Defb39Q70KL3 74 aa7.88□□□□□ -1.15
Nup88-201ENSMUST00000035283 Gm4707V9GXN5 68 aa7.87□□□□□ -1.15
Nup88-201ENSMUST00000035283 Krtap14O08640 167 aa7.85□□□□□ -1.15
Nup88-201ENSMUST00000035283 Limd2Q8BGB5 128 aa7.84□□□□□ -1.15
Nup88-201ENSMUST00000035283 Gm9918Q8BUR5 174 aa7.84□□□□□ -1.15
Nup88-201ENSMUST00000035283 Uqcr11Q9CPX8 56 aa7.84□□□□□ -1.15
Nup88-201ENSMUST00000035283 Cypt15B1AXS0 87 aa7.84□□□□□ -1.16
Nup88-201ENSMUST00000035283 Wfdc3Q14AE4 130 aa7.83□□□□□ -1.16
Nup88-201ENSMUST00000035283 Hectd4E9Q2E4 4418 aa7.83□□□□□ -1.16
Nup88-201ENSMUST00000035283 Dnah7aE9Q0T8 4024 aa7.83□□□□□ -1.16
Nup88-201ENSMUST00000035283 Tnp2P11378 117 aa7.83□□□□□ -1.16
Nup88-201ENSMUST00000035283 Spaca4Q80ZQ0 127 aa7.81□□□□□ -1.16
Nup88-201ENSMUST00000035283 Ndufs5Q99LY9 106 aa7.81□□□□□ -1.16
Nup88-201ENSMUST00000035283 Gm10999F6Q4M4 69 aa7.8□□□□□ -1.16
Nup88-201ENSMUST00000035283 Stard9Q80TF6 4561 aa7.79□□□□□ -1.16
Nup88-201ENSMUST00000035283 Krtap13O88375 197 aa7.79□□□□□ -1.16
Nup88-201ENSMUST00000035283 2310050C09RikG5E8Z3 280 aa7.78□□□□□ -1.16
Nup88-201ENSMUST00000035283 Krtap10-4Q08EG8 221 aa7.77□□□□□ -1.17
Nup88-201ENSMUST00000035283 Gpr15lA0A0B4J1N3 78 aa7.76□□□□□ -1.17
Nup88-201ENSMUST00000035283 Defb1P56386 69 aa7.73□□□□□ -1.17
Nup88-201ENSMUST00000035283 Vps13dB1ART2 4390 aa7.73□□□□□ -1.17
Nup88-201ENSMUST00000035283 Q8BGJ3 129 aa7.71□□□□□ -1.17
Nup88-201ENSMUST00000035283 OxtP35454 125 aa7.71□□□□□ -1.18
Nup88-201ENSMUST00000035283 2310034C09RikQ9D746 214 aa7.71□□□□□ -1.18
Nup88-201ENSMUST00000035283 Dnah2P0C6F1 4456 aa7.7□□□□□ -1.18
Nup88-201ENSMUST00000035283 Pkd1O08852 4293 aa7.67□□□□□ -1.18
Nup88-201ENSMUST00000035283 Lrp1bQ9JI18 4599 aa7.67□□□□□ -1.18
Nup88-201ENSMUST00000035283 Gm9821Q8K076 103 aa7.66□□□□□ -1.18
Nup88-201ENSMUST00000035283 FcgbpE9Q0B5 2583 aa7.65□□□□□ -1.18
Nup88-201ENSMUST00000035283 2310079G19RikQ9D6L6 185 aa7.65□□□□□ -1.18
Nup88-201ENSMUST00000035283 Ly6g6cQ9Z1Q4 126 aa7.63□□□□□ -1.19
Nup88-201ENSMUST00000035283 Krtap3-2Q9D638 99 aa7.57□□□□□ -1.2
Nup88-201ENSMUST00000035283 Krtap3-3Q9D7P0 99 aa7.57□□□□□ -1.2
Nup88-201ENSMUST00000035283 Pkhd1E9PZ36 4059 aa7.56□□□□□ -1.2
Nup88-201ENSMUST00000035283 Krtap10-10A0A1W2P7T6 217 aa7.54□□□□□ -1.2
Nup88-201ENSMUST00000035283 ApobE9Q414 4505 aa7.53□□□□□ -1.2
Nup88-201ENSMUST00000035283 A930033H14RikG5E8X6 103 aa7.47□□□□□ -1.21
Nup88-201ENSMUST00000035283 D6Ertd527eA0A0N4SWI3 464 aa7.47□□□□□ -1.21
Nup88-201ENSMUST00000035283 4930507D05RikQ8C9C9 103 aa7.46□□□□□ -1.21
Nup88-201ENSMUST00000035283 Gm2696A0A1W2P709 240 aa7.45□□□□□ -1.22
Nup88-201ENSMUST00000035283 Gm4491E0CX42 125 aa7.43□□□□□ -1.22
Nup88-201ENSMUST00000035283 Pla2g10Q9QXX3 151 aa7.4□□□□□ -1.23
Nup88-201ENSMUST00000035283 Defb11Q8R2I7 77 aa7.36□□□□□ -1.23
Nup88-201ENSMUST00000035283 Fat2Q5F226 4351 aa7.34□□□□□ -1.24
Nup88-201ENSMUST00000035283 SacsQ9JLC8 4582 aa7.33□□□□□ -1.24
Nup88-201ENSMUST00000035283 Gm20537G3UYK7 97 aa7.32□□□□□ -1.24
Nup88-201ENSMUST00000035283 Gm11939A2A592 99 aa7.31□□□□□ -1.24
Nup88-201ENSMUST00000035283 Gm3880A0A1B0GSB3 72 aa7.28□□□□□ -1.24
Nup88-201ENSMUST00000035283 Vps13bQ80TY5 3993 aa7.28□□□□□ -1.24
Nup88-201ENSMUST00000035283 Gm12216A0A1W2P827 62 aa7.26□□□□□ -1.25
Nup88-201ENSMUST00000035283 RetnlbQ99P86 105 aa7.26□□□□□ -1.25
Nup88-201ENSMUST00000035283 Fat1A0A1L1SQU7 4645 aa7.26□□□□□ -1.25
Nup88-201ENSMUST00000035283 Cox6b2Q80ZN9 88 aa7.22□□□□□ -1.25
Nup88-201ENSMUST00000035283 Pkhd1l1Q80ZA4 4249 aa7.17□□□□□ -1.26
Nup88-201ENSMUST00000035283 Rps29P62274 56 aa7.17□□□□□ -1.26
Nup88-201ENSMUST00000035283 Dync1h1Q9JHU4 4644 aaKnown RBP7.14□□□□□ -1.27
Nup88-201ENSMUST00000035283 Lrp1Q91ZX7 4545 aaKnown RBP7.14□□□□□ -1.27
Nup88-201ENSMUST00000035283 CriptO70333 101 aa7.11□□□□□ -1.27
Nup88-201ENSMUST00000035283 Ryr3A2AGL3 4863 aa7.08□□□□□ -1.28
Nup88-201ENSMUST00000035283 Gm10382Q3V0T5 144 aa7.05□□□□□ -1.28
Nup88-201ENSMUST00000035283 Gm5767A0A0J9YTU8 78 aa7.01□□□□□ -1.29
Nup88-201ENSMUST00000035283 Gm9955Q8CEJ8 102 aa7.01□□□□□ -1.29
Nup88-201ENSMUST00000035283 Romo1P60603 79 aa6.95□□□□□ -1.3
Nup88-201ENSMUST00000035283 Gm9736A0A1W2P7N1 277 aa6.93□□□□□ -1.3
Nup88-201ENSMUST00000035283 Gm17606F6ZL36 78 aa6.93□□□□□ -1.3
Nup88-201ENSMUST00000035283 Mycbp2Q7TPH6 4711 aa6.91□□□□□ -1.3
Nup88-201ENSMUST00000035283 Gm21887J3QQ04 176 aa6.9□□□□□ -1.31
Nup88-201ENSMUST00000035283 Rnase13Q5GAM7 153 aa6.88□□□□□ -1.31
Nup88-201ENSMUST00000035283 Krtap15-1Q9QZU5 150 aa6.88□□□□□ -1.31
Nup88-201ENSMUST00000035283 Fat3Q8BNA6 4555 aa6.88□□□□□ -1.31
Nup88-201ENSMUST00000035283 Mp68P56379 58 aa6.87□□□□□ -1.31
Nup88-201ENSMUST00000035283 Rpl37Q9D823 97 aa6.86□□□□□ -1.31
Nup88-201ENSMUST00000035283 Kmt2cQ8BRH4 4903 aa6.86□□□□□ -1.31
Nup88-201ENSMUST00000035283 Gm5965D3Z724 196 aa6.86□□□□□ -1.31
Nup88-201ENSMUST00000035283 Gm20538F6Z9R1 75 aa6.84□□□□□ -1.31
Nup88-201ENSMUST00000035283 Krtap19-5O08632 62 aa6.81□□□□□ -1.32
Nup88-201ENSMUST00000035283 Krtap3-1A2A591 98 aa6.79□□□□□ -1.32
Nup88-201ENSMUST00000035283 Abca13Q5SSE9 5034 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms