RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Dync1h1Q9JHU4 4644 aaKnown RBP13.63□□□□□ -0.23
Cln6-201ENSMUST00000034776 Fat1A0A1L1SQU7 4645 aa13.62□□□□□ -0.23
Cln6-201ENSMUST00000034776 A0A286YE49 62 aa13.61□□□□□ -0.23
Cln6-201ENSMUST00000034776 Gm19935A0A1B0GSF9 52 aa13.58□□□□□ -0.23
Cln6-201ENSMUST00000034776 Pkhd1E9PZ36 4059 aa13.56□□□□□ -0.24
Cln6-201ENSMUST00000034776 Wfdc3Q14AE4 130 aa13.49□□□□□ -0.25
Cln6-201ENSMUST00000034776 Ryr3A2AGL3 4863 aa13.48□□□□□ -0.25
Cln6-201ENSMUST00000034776 Coa6Q8BGD8 79 aa13.47□□□□□ -0.25
Cln6-201ENSMUST00000034776 Igkv3-3A0A140T8Q0 119 aa13.45□□□□□ -0.26
Cln6-201ENSMUST00000034776 1700074P13RikQ9D9G7 251 aa13.44□□□□□ -0.26
Cln6-201ENSMUST00000034776 Rps28P62858 69 aaKnown RBP13.43□□□□□ -0.26
Cln6-201ENSMUST00000034776 Spint4Q9D263 159 aa13.43□□□□□ -0.26
Cln6-201ENSMUST00000034776 Fat2Q5F226 4351 aa13.43□□□□□ -0.26
Cln6-201ENSMUST00000034776 Smlr1J3QMJ4 66 aa13.41□□□□□ -0.26
Cln6-201ENSMUST00000034776 Spaca4Q80ZQ0 127 aa13.39□□□□□ -0.27
Cln6-201ENSMUST00000034776 SnurfQ9WU12 71 aa13.39□□□□□ -0.27
Cln6-201ENSMUST00000034776 Atox1O08997 68 aaKnown RBP13.39□□□□□ -0.27
Cln6-201ENSMUST00000034776 Mrpl55Q9CZ83 127 aa13.34□□□□□ -0.27
Cln6-201ENSMUST00000034776 SacsQ9JLC8 4582 aa13.33□□□□□ -0.28
Cln6-201ENSMUST00000034776 Pet100P0DJE0 76 aa13.31□□□□□ -0.28
Cln6-201ENSMUST00000034776 Dph3Q8K0W9 82 aa13.3□□□□□ -0.28
Cln6-201ENSMUST00000034776 Cypt15B1AXS0 87 aa13.29□□□□□ -0.28
Cln6-201ENSMUST00000034776 Defb12Q8K4N3 78 aa13.27□□□□□ -0.28
Cln6-201ENSMUST00000034776 Gm10267M0QWD8 85 aa13.26□□□□□ -0.29
Cln6-201ENSMUST00000034776 Serp1Q9Z1W5 66 aa13.23□□□□□ -0.29
Cln6-201ENSMUST00000034776 Ryr2E9Q401 4966 aaKnown RBP13.21□□□□□ -0.29
Cln6-201ENSMUST00000034776 Brk1Q91VR8 75 aa13.19□□□□□ -0.3
Cln6-201ENSMUST00000034776 Chtf8P0CG14 533 aa13.19□□□□□ -0.3
Cln6-201ENSMUST00000034776 Coa5Q99M07 74 aa13.18□□□□□ -0.3
Cln6-201ENSMUST00000034776 RetnlbQ99P86 105 aa13.16□□□□□ -0.3
Cln6-201ENSMUST00000034776 Pkhd1l1Q80ZA4 4249 aa13.15□□□□□ -0.3
Cln6-201ENSMUST00000034776 Defb13Q8R2I4 64 aa13.13□□□□□ -0.31
Cln6-201ENSMUST00000034776 SvipQ3UZP4 77 aa13.13□□□□□ -0.31
Cln6-201ENSMUST00000034776 Cdc42se1Q8BHL7 80 aa13.07□□□□□ -0.32
Cln6-201ENSMUST00000034776 Vps13bQ80TY5 3993 aa13.06□□□□□ -0.32
Cln6-201ENSMUST00000034776 Gm10160F6Y577 67 aa13.03□□□□□ -0.32
Cln6-201ENSMUST00000034776 Rps29P62274 56 aa13.01□□□□□ -0.33
Cln6-201ENSMUST00000034776 Kmt2cQ8BRH4 4903 aa12.98□□□□□ -0.33
Cln6-201ENSMUST00000034776 Defb38Q7TNV7 63 aa12.96□□□□□ -0.33
Cln6-201ENSMUST00000034776 A530084C06RikQ3UTW2 186 aa12.95□□□□□ -0.34
Cln6-201ENSMUST00000034776 Lrp1Q91ZX7 4545 aaKnown RBP12.91□□□□□ -0.34
Cln6-201ENSMUST00000034776 Gm10197F6QEY5 67 aa12.91□□□□□ -0.34
Cln6-201ENSMUST00000034776 H2al1aQ5M8Q2 105 aa12.88□□□□□ -0.35
Cln6-201ENSMUST00000034776 Krtap19-5O08632 62 aa12.88□□□□□ -0.35
Cln6-201ENSMUST00000034776 Ryr1E9PZQ0 5035 aa12.85□□□□□ -0.35
Cln6-201ENSMUST00000034776 Gm26620Q9CY65 116 aa12.82□□□□□ -0.36
Cln6-201ENSMUST00000034776 Gm21798J3QNU5 87 aa12.81□□□□□ -0.36
Cln6-201ENSMUST00000034776 Gm11939A2A592 99 aa12.8□□□□□ -0.36
Cln6-201ENSMUST00000034776 Krtap3-2Q9D638 99 aa12.8□□□□□ -0.36
Cln6-201ENSMUST00000034776 Krtap3-3Q9D7P0 99 aa12.8□□□□□ -0.36
Cln6-201ENSMUST00000034776 Gm10643Q3URG9 111 aa12.8□□□□□ -0.36
Cln6-201ENSMUST00000034776 Fat3Q8BNA6 4555 aa12.8□□□□□ -0.36
Cln6-201ENSMUST00000034776 Dnah8Q91XQ0 4731 aa12.77□□□□□ -0.36
Cln6-201ENSMUST00000034776 Phxr4P15974 95 aa12.7□□□□□ -0.38
Cln6-201ENSMUST00000034776 Gm10999F6Q4M4 69 aa12.67□□□□□ -0.38
Cln6-201ENSMUST00000034776 Q8BGJ3 129 aa12.62□□□□□ -0.39
Cln6-201ENSMUST00000034776 A930033H14RikG5E8X6 103 aa12.59□□□□□ -0.39
Cln6-201ENSMUST00000034776 Gm20661K7N787 53 aa12.59□□□□□ -0.39
Cln6-201ENSMUST00000034776 2310034C09RikQ9D746 214 aa12.56□□□□□ -0.4
Cln6-201ENSMUST00000034776 Abca13Q5SSE9 5034 aa12.56□□□□□ -0.4
Cln6-201ENSMUST00000034776 2310079G19RikQ9D6L6 185 aa12.55□□□□□ -0.4
Cln6-201ENSMUST00000034776 D6Ertd527eA0A0N4SWI3 464 aa12.53□□□□□ -0.4
Cln6-201ENSMUST00000034776 H2al1eQ810S6 105 aa12.51□□□□□ -0.41
Cln6-201ENSMUST00000034776 Gm9736A0A1W2P7N1 277 aa12.5□□□□□ -0.41
Cln6-201ENSMUST00000034776 Gm4491E0CX42 125 aa12.49□□□□□ -0.41
Cln6-201ENSMUST00000034776 Gm5767A0A0J9YTU8 78 aa12.48□□□□□ -0.41
Cln6-201ENSMUST00000034776 Mycbp2Q7TPH6 4711 aa12.45□□□□□ -0.42
Cln6-201ENSMUST00000034776 Gm10337F7DEP7 55 aa12.41□□□□□ -0.42
Cln6-201ENSMUST00000034776 4930507D05RikQ8C9C9 103 aa12.39□□□□□ -0.43
Cln6-201ENSMUST00000034776 H2al1bA0A087WP11 105 aa12.38□□□□□ -0.43
Cln6-201ENSMUST00000034776 H2al1kJ3QP08 105 aa12.34□□□□□ -0.43
Cln6-201ENSMUST00000034776 H2al1mQ9DAD9 105 aa12.34□□□□□ -0.43
Cln6-201ENSMUST00000034776 Dnhd1D3Z2X2 4750 aa12.33□□□□□ -0.44
Cln6-201ENSMUST00000034776 Gm5965D3Z724 196 aa12.31□□□□□ -0.44
Cln6-201ENSMUST00000034776 Uqcr11Q9CPX8 56 aa12.28□□□□□ -0.44
Cln6-201ENSMUST00000034776 Ndufb1P0DN34 57 aa12.28□□□□□ -0.44
Cln6-201ENSMUST00000034776 Herc2Q4U2R1 4836 aa12.26□□□□□ -0.45
Cln6-201ENSMUST00000034776 Limd2Q8BGB5 128 aa12.25□□□□□ -0.45
Cln6-201ENSMUST00000034776 Defb1P56386 69 aa12.25□□□□□ -0.45
Cln6-201ENSMUST00000034776 Sox16Q62247 57 aa12.25□□□□□ -0.45
Cln6-201ENSMUST00000034776 4933415A04RikQ9D443 101 aa12.25□□□□□ -0.45
Cln6-201ENSMUST00000034776 Kiaa1109A2AAE1 5005 aa12.22□□□□□ -0.45
Cln6-201ENSMUST00000034776 Birc6O88738 4882 aa12.2□□□□□ -0.46
Cln6-201ENSMUST00000034776 SptssbQ925E8 76 aa12.17□□□□□ -0.46
Cln6-201ENSMUST00000034776 Rpl37Q9D823 97 aa12.14□□□□□ -0.47
Cln6-201ENSMUST00000034776 Krtap15-1Q9QZU5 150 aa12.13□□□□□ -0.47
Cln6-201ENSMUST00000034776 9230102O04RikA2ASX7 82 aa12.08□□□□□ -0.48
Cln6-201ENSMUST00000034776 Rnase13Q5GAM7 153 aa12.05□□□□□ -0.48
Cln6-201ENSMUST00000034776 HydinQ80W93 5154 aa12.02□□□□□ -0.49
Cln6-201ENSMUST00000034776 Gm9821Q8K076 103 aa11.95□□□□□ -0.5
Cln6-201ENSMUST00000034776 Cox6b2Q80ZN9 88 aa11.93□□□□□ -0.5
Cln6-201ENSMUST00000034776 Gm17416Q30KP4 66 aa11.86□□□□□ -0.51
Cln6-201ENSMUST00000034776 Lrp2A2ARV4 4660 aa11.82□□□□□ -0.52
Cln6-201ENSMUST00000034776 Gm3646F6S692 53 aa11.71□□□□□ -0.54
Cln6-201ENSMUST00000034776 Sec61gP60060 68 aa11.67□□□□□ -0.54
Cln6-201ENSMUST00000034776 PcloQ9QYX7 5068 aa11.61□□□□□ -0.55
Cln6-201ENSMUST00000034776 2210017I01RikA0A0A6YVV1 95 aa11.55□□□□□ -0.56
Cln6-201ENSMUST00000034776 Krtap3-1A2A591 98 aa11.54□□□□□ -0.56
Cln6-201ENSMUST00000034776 Gm17606F6ZL36 78 aa11.54□□□□□ -0.56
Cln6-201ENSMUST00000034776 Ndufs5Q99LY9 106 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms