RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Dync1h1Q9JHU4 4644 aaKnown RBP13,63□□□□□ -0,23
Cln6-201ENSMUST00000034776 Fat1A0A1L1SQU7 4645 aa13,62□□□□□ -0,23
Cln6-201ENSMUST00000034776 A0A286YE49 62 aa13,61□□□□□ -0,23
Cln6-201ENSMUST00000034776 Gm19935A0A1B0GSF9 52 aa13,58□□□□□ -0,23
Cln6-201ENSMUST00000034776 Pkhd1E9PZ36 4059 aa13,56□□□□□ -0,24
Cln6-201ENSMUST00000034776 Wfdc3Q14AE4 130 aa13,49□□□□□ -0,25
Cln6-201ENSMUST00000034776 Ryr3A2AGL3 4863 aa13,48□□□□□ -0,25
Cln6-201ENSMUST00000034776 Coa6Q8BGD8 79 aa13,47□□□□□ -0,25
Cln6-201ENSMUST00000034776 Igkv3-3A0A140T8Q0 119 aa13,45□□□□□ -0,26
Cln6-201ENSMUST00000034776 1700074P13RikQ9D9G7 251 aa13,44□□□□□ -0,26
Cln6-201ENSMUST00000034776 Rps28P62858 69 aaKnown RBP13,43□□□□□ -0,26
Cln6-201ENSMUST00000034776 Spint4Q9D263 159 aa13,43□□□□□ -0,26
Cln6-201ENSMUST00000034776 Fat2Q5F226 4351 aa13,43□□□□□ -0,26
Cln6-201ENSMUST00000034776 Smlr1J3QMJ4 66 aa13,41□□□□□ -0,26
Cln6-201ENSMUST00000034776 Spaca4Q80ZQ0 127 aa13,39□□□□□ -0,27
Cln6-201ENSMUST00000034776 SnurfQ9WU12 71 aa13,39□□□□□ -0,27
Cln6-201ENSMUST00000034776 Atox1O08997 68 aaKnown RBP13,39□□□□□ -0,27
Cln6-201ENSMUST00000034776 Mrpl55Q9CZ83 127 aa13,34□□□□□ -0,27
Cln6-201ENSMUST00000034776 SacsQ9JLC8 4582 aa13,33□□□□□ -0,28
Cln6-201ENSMUST00000034776 Pet100P0DJE0 76 aa13,31□□□□□ -0,28
Cln6-201ENSMUST00000034776 Dph3Q8K0W9 82 aa13,3□□□□□ -0,28
Cln6-201ENSMUST00000034776 Cypt15B1AXS0 87 aa13,29□□□□□ -0,28
Cln6-201ENSMUST00000034776 Defb12Q8K4N3 78 aa13,27□□□□□ -0,28
Cln6-201ENSMUST00000034776 Gm10267M0QWD8 85 aa13,26□□□□□ -0,29
Cln6-201ENSMUST00000034776 Serp1Q9Z1W5 66 aa13,23□□□□□ -0,29
Cln6-201ENSMUST00000034776 Ryr2E9Q401 4966 aaKnown RBP13,21□□□□□ -0,29
Cln6-201ENSMUST00000034776 Brk1Q91VR8 75 aa13,19□□□□□ -0,3
Cln6-201ENSMUST00000034776 Chtf8P0CG14 533 aa13,19□□□□□ -0,3
Cln6-201ENSMUST00000034776 Coa5Q99M07 74 aa13,18□□□□□ -0,3
Cln6-201ENSMUST00000034776 RetnlbQ99P86 105 aa13,16□□□□□ -0,3
Cln6-201ENSMUST00000034776 Pkhd1l1Q80ZA4 4249 aa13,15□□□□□ -0,3
Cln6-201ENSMUST00000034776 Defb13Q8R2I4 64 aa13,13□□□□□ -0,31
Cln6-201ENSMUST00000034776 SvipQ3UZP4 77 aa13,13□□□□□ -0,31
Cln6-201ENSMUST00000034776 Cdc42se1Q8BHL7 80 aa13,07□□□□□ -0,32
Cln6-201ENSMUST00000034776 Vps13bQ80TY5 3993 aa13,06□□□□□ -0,32
Cln6-201ENSMUST00000034776 Gm10160F6Y577 67 aa13,03□□□□□ -0,32
Cln6-201ENSMUST00000034776 Rps29P62274 56 aa13,01□□□□□ -0,33
Cln6-201ENSMUST00000034776 Kmt2cQ8BRH4 4903 aa12,98□□□□□ -0,33
Cln6-201ENSMUST00000034776 Defb38Q7TNV7 63 aa12,96□□□□□ -0,33
Cln6-201ENSMUST00000034776 A530084C06RikQ3UTW2 186 aa12,95□□□□□ -0,34
Cln6-201ENSMUST00000034776 Lrp1Q91ZX7 4545 aaKnown RBP12,91□□□□□ -0,34
Cln6-201ENSMUST00000034776 Gm10197F6QEY5 67 aa12,91□□□□□ -0,34
Cln6-201ENSMUST00000034776 H2al1aQ5M8Q2 105 aa12,88□□□□□ -0,35
Cln6-201ENSMUST00000034776 Krtap19-5O08632 62 aa12,88□□□□□ -0,35
Cln6-201ENSMUST00000034776 Ryr1E9PZQ0 5035 aa12,85□□□□□ -0,35
Cln6-201ENSMUST00000034776 Gm26620Q9CY65 116 aa12,82□□□□□ -0,36
Cln6-201ENSMUST00000034776 Gm21798J3QNU5 87 aa12,81□□□□□ -0,36
Cln6-201ENSMUST00000034776 Gm11939A2A592 99 aa12,8□□□□□ -0,36
Cln6-201ENSMUST00000034776 Krtap3-2Q9D638 99 aa12,8□□□□□ -0,36
Cln6-201ENSMUST00000034776 Krtap3-3Q9D7P0 99 aa12,8□□□□□ -0,36
Cln6-201ENSMUST00000034776 Gm10643Q3URG9 111 aa12,8□□□□□ -0,36
Cln6-201ENSMUST00000034776 Fat3Q8BNA6 4555 aa12,8□□□□□ -0,36
Cln6-201ENSMUST00000034776 Dnah8Q91XQ0 4731 aa12,77□□□□□ -0,36
Cln6-201ENSMUST00000034776 Phxr4P15974 95 aa12,7□□□□□ -0,38
Cln6-201ENSMUST00000034776 Gm10999F6Q4M4 69 aa12,67□□□□□ -0,38
Cln6-201ENSMUST00000034776 Q8BGJ3 129 aa12,62□□□□□ -0,39
Cln6-201ENSMUST00000034776 A930033H14RikG5E8X6 103 aa12,59□□□□□ -0,39
Cln6-201ENSMUST00000034776 Gm20661K7N787 53 aa12,59□□□□□ -0,39
Cln6-201ENSMUST00000034776 2310034C09RikQ9D746 214 aa12,56□□□□□ -0,4
Cln6-201ENSMUST00000034776 Abca13Q5SSE9 5034 aa12,56□□□□□ -0,4
Cln6-201ENSMUST00000034776 2310079G19RikQ9D6L6 185 aa12,55□□□□□ -0,4
Cln6-201ENSMUST00000034776 D6Ertd527eA0A0N4SWI3 464 aa12,53□□□□□ -0,4
Cln6-201ENSMUST00000034776 H2al1eQ810S6 105 aa12,51□□□□□ -0,41
Cln6-201ENSMUST00000034776 Gm9736A0A1W2P7N1 277 aa12,5□□□□□ -0,41
Cln6-201ENSMUST00000034776 Gm4491E0CX42 125 aa12,49□□□□□ -0,41
Cln6-201ENSMUST00000034776 Gm5767A0A0J9YTU8 78 aa12,48□□□□□ -0,41
Cln6-201ENSMUST00000034776 Mycbp2Q7TPH6 4711 aa12,45□□□□□ -0,42
Cln6-201ENSMUST00000034776 Gm10337F7DEP7 55 aa12,41□□□□□ -0,42
Cln6-201ENSMUST00000034776 4930507D05RikQ8C9C9 103 aa12,39□□□□□ -0,43
Cln6-201ENSMUST00000034776 H2al1bA0A087WP11 105 aa12,38□□□□□ -0,43
Cln6-201ENSMUST00000034776 H2al1kJ3QP08 105 aa12,34□□□□□ -0,43
Cln6-201ENSMUST00000034776 H2al1mQ9DAD9 105 aa12,34□□□□□ -0,43
Cln6-201ENSMUST00000034776 Dnhd1D3Z2X2 4750 aa12,33□□□□□ -0,44
Cln6-201ENSMUST00000034776 Gm5965D3Z724 196 aa12,31□□□□□ -0,44
Cln6-201ENSMUST00000034776 Uqcr11Q9CPX8 56 aa12,28□□□□□ -0,44
Cln6-201ENSMUST00000034776 Ndufb1P0DN34 57 aa12,28□□□□□ -0,44
Cln6-201ENSMUST00000034776 Herc2Q4U2R1 4836 aa12,26□□□□□ -0,45
Cln6-201ENSMUST00000034776 Limd2Q8BGB5 128 aa12,25□□□□□ -0,45
Cln6-201ENSMUST00000034776 Defb1P56386 69 aa12,25□□□□□ -0,45
Cln6-201ENSMUST00000034776 Sox16Q62247 57 aa12,25□□□□□ -0,45
Cln6-201ENSMUST00000034776 4933415A04RikQ9D443 101 aa12,25□□□□□ -0,45
Cln6-201ENSMUST00000034776 Kiaa1109A2AAE1 5005 aa12,22□□□□□ -0,45
Cln6-201ENSMUST00000034776 Birc6O88738 4882 aa12,2□□□□□ -0,46
Cln6-201ENSMUST00000034776 SptssbQ925E8 76 aa12,17□□□□□ -0,46
Cln6-201ENSMUST00000034776 Rpl37Q9D823 97 aa12,14□□□□□ -0,47
Cln6-201ENSMUST00000034776 Krtap15-1Q9QZU5 150 aa12,13□□□□□ -0,47
Cln6-201ENSMUST00000034776 9230102O04RikA2ASX7 82 aa12,08□□□□□ -0,48
Cln6-201ENSMUST00000034776 Rnase13Q5GAM7 153 aa12,05□□□□□ -0,48
Cln6-201ENSMUST00000034776 HydinQ80W93 5154 aa12,02□□□□□ -0,49
Cln6-201ENSMUST00000034776 Gm9821Q8K076 103 aa11,95□□□□□ -0,5
Cln6-201ENSMUST00000034776 Cox6b2Q80ZN9 88 aa11,93□□□□□ -0,5
Cln6-201ENSMUST00000034776 Gm17416Q30KP4 66 aa11,86□□□□□ -0,51
Cln6-201ENSMUST00000034776 Lrp2A2ARV4 4660 aa11,82□□□□□ -0,52
Cln6-201ENSMUST00000034776 Gm3646F6S692 53 aa11,71□□□□□ -0,54
Cln6-201ENSMUST00000034776 Sec61gP60060 68 aa11,67□□□□□ -0,54
Cln6-201ENSMUST00000034776 PcloQ9QYX7 5068 aa11,61□□□□□ -0,55
Cln6-201ENSMUST00000034776 2210017I01RikA0A0A6YVV1 95 aa11,55□□□□□ -0,56
Cln6-201ENSMUST00000034776 Krtap3-1A2A591 98 aa11,54□□□□□ -0,56
Cln6-201ENSMUST00000034776 Gm17606F6ZL36 78 aa11,54□□□□□ -0,56
Cln6-201ENSMUST00000034776 Ndufs5Q99LY9 106 aa11,5□□□□□ -0,57
Retrieved 100 of 22,080 RNA–protein pairs in 75,8 ms