RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 H2al1kJ3QP08 105 aa8.93□□□□□ -0.98
Rtf1-201ENSMUST00000028767 H2al1mQ9DAD9 105 aa8.93□□□□□ -0.98
Rtf1-201ENSMUST00000028767 Gm37013Q8K491 104 aa8.9□□□□□ -0.98
Rtf1-201ENSMUST00000028767 2310050C09RikG5E8Z3 280 aa8.87□□□□□ -0.99
Rtf1-201ENSMUST00000028767 Krtap29-1A2A5X4 342 aa8.86□□□□□ -0.99
Rtf1-201ENSMUST00000028767 Xirp2Q4U4S6 3784 aa8.85□□□□□ -0.99
Rtf1-201ENSMUST00000028767 Krtap13O88375 197 aa8.84□□□□□ -0.99
Rtf1-201ENSMUST00000028767 OxtP35454 125 aa8.82□□□□□ -1
Rtf1-201ENSMUST00000028767 Gm16253D3Z167 63 aa8.81□□□□□ -1
Rtf1-201ENSMUST00000028767 Limd2Q8BGB5 128 aa8.8□□□□□ -1
Rtf1-201ENSMUST00000028767 Krtap10-10A0A1W2P7T6 217 aa8.77□□□□□ -1.01
Rtf1-201ENSMUST00000028767 4930507D05RikQ8C9C9 103 aa8.77□□□□□ -1.01
Rtf1-201ENSMUST00000028767 Gm21798J3QNU5 87 aa8.76□□□□□ -1.01
Rtf1-201ENSMUST00000028767 BsnO88737 3942 aa8.76□□□□□ -1.01
Rtf1-201ENSMUST00000028767 Krtap14O08640 167 aa8.76□□□□□ -1.01
Rtf1-201ENSMUST00000028767 2310034C09RikQ9D746 214 aa8.74□□□□□ -1.01
Rtf1-201ENSMUST00000028767 Gm2310J3QNJ2 377 aa8.7□□□□□ -1.02
Rtf1-201ENSMUST00000028767 Uqcr11Q9CPX8 56 aa8.67□□□□□ -1.02
Rtf1-201ENSMUST00000028767 Gm26620Q9CY65 116 aa8.67□□□□□ -1.02
Rtf1-201ENSMUST00000028767 Tenm2Q9WTS5 2764 aa8.65□□□□□ -1.02
Rtf1-201ENSMUST00000028767 Gm2696A0A1W2P709 240 aa8.62□□□□□ -1.03
Rtf1-201ENSMUST00000028767 Muc6Q80T03 2850 aa8.62□□□□□ -1.03
Rtf1-201ENSMUST00000028767 Tnp2P11378 117 aa8.59□□□□□ -1.03
Rtf1-201ENSMUST00000028767 Gm10643Q3URG9 111 aa8.59□□□□□ -1.04
Rtf1-201ENSMUST00000028767 Gm17606F6ZL36 78 aa8.56□□□□□ -1.04
Rtf1-201ENSMUST00000028767 Gm4491E0CX42 125 aa8.52□□□□□ -1.05
Rtf1-201ENSMUST00000028767 Hspg2Q05793 3707 aaKnown RBP8.46□□□□□ -1.05
Rtf1-201ENSMUST00000028767 Dnah14A0A140LIJ4 4489 aa8.44□□□□□ -1.06
Rtf1-201ENSMUST00000028767 Megf8P60882 2789 aa8.42□□□□□ -1.06
Rtf1-201ENSMUST00000028767 4933415A04RikQ9D443 101 aa8.41□□□□□ -1.06
Rtf1-201ENSMUST00000028767 Rnase13Q5GAM7 153 aa8.38□□□□□ -1.07
Rtf1-201ENSMUST00000028767 Gm3646F6S692 53 aa8.37□□□□□ -1.07
Rtf1-201ENSMUST00000028767 Krtap15-1Q9QZU5 150 aa8.33□□□□□ -1.08
Rtf1-201ENSMUST00000028767 Gm9918Q8BUR5 174 aa8.29□□□□□ -1.08
Rtf1-201ENSMUST00000028767 Gm12216A0A1W2P827 62 aa8.28□□□□□ -1.08
Rtf1-201ENSMUST00000028767 Dnah10D3YYQ8 4591 aa8.27□□□□□ -1.09
Rtf1-201ENSMUST00000028767 Gm3880A0A1B0GSB3 72 aa8.26□□□□□ -1.09
Rtf1-201ENSMUST00000028767 Gm5767A0A0J9YTU8 78 aa8.2□□□□□ -1.1
Rtf1-201ENSMUST00000028767 Gm9821Q8K076 103 aa8.17□□□□□ -1.1
Rtf1-201ENSMUST00000028767 Csmd3Q80T79 3707 aa8.17□□□□□ -1.1
Rtf1-201ENSMUST00000028767 D6Ertd527eA0A0N4SWI3 464 aa8.1□□□□□ -1.11
Rtf1-201ENSMUST00000028767 Dnah7bL7N1Y0 4068 aa8.08□□□□□ -1.12
Rtf1-201ENSMUST00000028767 1700042G07RikB1AUF7 90 aa8.08□□□□□ -1.12
Rtf1-201ENSMUST00000028767 Huwe1Q7TMY8 4377 aaKnown RBP8.08□□□□□ -1.12
Rtf1-201ENSMUST00000028767 Rps29P62274 56 aa8.08□□□□□ -1.12
Rtf1-201ENSMUST00000028767 Gm9955Q8CEJ8 102 aa8.08□□□□□ -1.12
Rtf1-201ENSMUST00000028767 CriptO70333 101 aa8□□□□□ -1.13
Rtf1-201ENSMUST00000028767 Dnah17Q69Z23 4481 aa8□□□□□ -1.13
Rtf1-201ENSMUST00000028767 Cox6b2Q80ZN9 88 aa7.99□□□□□ -1.13
Rtf1-201ENSMUST00000028767 Gm5965D3Z724 196 aa7.99□□□□□ -1.13
Rtf1-201ENSMUST00000028767 2310079G19RikQ9D6L6 185 aa7.92□□□□□ -1.14
Rtf1-201ENSMUST00000028767 Gm10382Q3V0T5 144 aa7.9□□□□□ -1.14
Rtf1-201ENSMUST00000028767 Dnah11E9Q7N9 4488 aa7.88□□□□□ -1.15
Rtf1-201ENSMUST00000028767 PlecQ9QXS1 4691 aaKnown RBP7.87□□□□□ -1.15
Rtf1-201ENSMUST00000028767 Gm9736A0A1W2P7N1 277 aa7.87□□□□□ -1.15
Rtf1-201ENSMUST00000028767 A930033H14RikG5E8X6 103 aa7.85□□□□□ -1.15
Rtf1-201ENSMUST00000028767 Rpl37Q9D823 97 aa7.84□□□□□ -1.15
Rtf1-201ENSMUST00000028767 Mp68P56379 58 aa7.81□□□□□ -1.16
Rtf1-201ENSMUST00000028767 Dnah9B1AR51 4484 aa7.8□□□□□ -1.16
Rtf1-201ENSMUST00000028767 Spink7Q6IE32 76 aa7.78□□□□□ -1.16
Rtf1-201ENSMUST00000028767 Dnah6E9Q0B6 4144 aa7.76□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Dnah3Q8BW94 4083 aa7.75□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Kmt2aP55200 3966 aa7.75□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Gm11939A2A592 99 aa7.73□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Dnah5Q8VHE6 4621 aa7.72□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Sec61bQ9CQS8 96 aaKnown RBP7.72□□□□□ -1.17
Rtf1-201ENSMUST00000028767 Gm20537G3UYK7 97 aa7.7□□□□□ -1.18
Rtf1-201ENSMUST00000028767 TnxbO35452 4006 aa7.69□□□□□ -1.18
Rtf1-201ENSMUST00000028767 Romo1P60603 79 aa7.69□□□□□ -1.18
Rtf1-201ENSMUST00000028767 BC029722A0A0N4SW31 51 aa7.69□□□□□ -1.18
Rtf1-201ENSMUST00000028767 PrkdcP97313 4128 aa7.68□□□□□ -1.18
Rtf1-201ENSMUST00000028767 Krtap3-2Q9D638 99 aa7.66□□□□□ -1.18
Rtf1-201ENSMUST00000028767 Krtap3-3Q9D7P0 99 aa7.66□□□□□ -1.18
Rtf1-201ENSMUST00000028767 2310057N15RikQ9D6T8 200 aa7.65□□□□□ -1.18
Rtf1-201ENSMUST00000028767 Fam229aB2KGE5 128 aa7.64□□□□□ -1.19
Rtf1-201ENSMUST00000028767 Pla2g10Q9QXX3 151 aa7.63□□□□□ -1.19
Rtf1-201ENSMUST00000028767 Vps13dB1ART2 4390 aa7.63□□□□□ -1.19
Rtf1-201ENSMUST00000028767 Krtap19-5O08632 62 aa7.61□□□□□ -1.19
Rtf1-201ENSMUST00000028767 Gm19426M0QWC7 77 aa7.54□□□□□ -1.2
Rtf1-201ENSMUST00000028767 Dnah1E9Q8T7 4250 aa7.51□□□□□ -1.21
Rtf1-201ENSMUST00000028767 Dync2h1Q45VK7 4306 aa7.51□□□□□ -1.21
Rtf1-201ENSMUST00000028767 Lrp1bQ9JI18 4599 aa7.5□□□□□ -1.21
Rtf1-201ENSMUST00000028767 Stard9Q80TF6 4561 aa7.5□□□□□ -1.21
Rtf1-201ENSMUST00000028767 ApobE9Q414 4505 aa7.43□□□□□ -1.22
Rtf1-201ENSMUST00000028767 Gm17416Q30KP4 66 aa7.4□□□□□ -1.22
Rtf1-201ENSMUST00000028767 Camk2n1Q6QWF9 78 aa7.37□□□□□ -1.23
Rtf1-201ENSMUST00000028767 Dnah2P0C6F1 4456 aa7.35□□□□□ -1.23
Rtf1-201ENSMUST00000028767 Dnah7cA0A087WR13 4024 aa7.35□□□□□ -1.23
Rtf1-201ENSMUST00000028767 Fras1Q80T14 4010 aa7.35□□□□□ -1.23
Rtf1-201ENSMUST00000028767 Ryr3A2AGL3 4863 aa7.33□□□□□ -1.24
Rtf1-201ENSMUST00000028767 2210017I01RikA0A0A6YVV1 95 aa7.31□□□□□ -1.24
Rtf1-201ENSMUST00000028767 Dync1h1Q9JHU4 4644 aaKnown RBP7.3□□□□□ -1.24
Rtf1-201ENSMUST00000028767 Hectd4E9Q2E4 4418 aa7.28□□□□□ -1.24
Rtf1-201ENSMUST00000028767 Gm10318A0A1W2P728 225 aa7.28□□□□□ -1.24
Rtf1-201ENSMUST00000028767 B930094E09RikQ8C4T2 136 aa7.24□□□□□ -1.25
Rtf1-201ENSMUST00000028767 Dnah7aE9Q0T8 4024 aa7.23□□□□□ -1.25
Rtf1-201ENSMUST00000028767 Gm21887J3QQ04 176 aa7.22□□□□□ -1.25
Rtf1-201ENSMUST00000028767 Ryr1E9PZQ0 5035 aa7.2□□□□□ -1.26
Rtf1-201ENSMUST00000028767 Lrp1Q91ZX7 4545 aaKnown RBP7.19□□□□□ -1.26
Rtf1-201ENSMUST00000028767 Fat1A0A1L1SQU7 4645 aa7.17□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms