RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Igkv3-3A0A140T8Q0 119 aa14,85□□□□□ -0,03
Cldnd1-201ENSMUST00000023426 Gm10197F6QEY5 67 aa14,84□□□□□ -0,03
Cldnd1-201ENSMUST00000023426 Gm10337F7DEP7 55 aa14,82□□□□□ -0,04
Cldnd1-201ENSMUST00000023426 Anapc11Q9CPX9 84 aa14,8□□□□□ -0,04
Cldnd1-201ENSMUST00000023426 Chtf8P0CG14 533 aa14,79□□□□□ -0,04
Cldnd1-201ENSMUST00000023426 Krtap14O08640 167 aa14,77□□□□□ -0,04
Cldnd1-201ENSMUST00000023426 Gm10267M0QWD8 85 aa14,77□□□□□ -0,05
Cldnd1-201ENSMUST00000023426 Mrpl55Q9CZ83 127 aa14,75□□□□□ -0,05
Cldnd1-201ENSMUST00000023426 Bean1Q9EQG5 255 aa14,74□□□□□ -0,05
Cldnd1-201ENSMUST00000023426 H2al1bA0A087WP11 105 aa14,69□□□□□ -0,06
Cldnd1-201ENSMUST00000023426 H2al1kJ3QP08 105 aa14,69□□□□□ -0,06
Cldnd1-201ENSMUST00000023426 H2al1eQ810S6 105 aa14,69□□□□□ -0,06
Cldnd1-201ENSMUST00000023426 H2al1mQ9DAD9 105 aa14,69□□□□□ -0,06
Cldnd1-201ENSMUST00000023426 Gm10160F6Y577 67 aa14,66□□□□□ -0,06
Cldnd1-201ENSMUST00000023426 Dnah7cA0A087WR13 4024 aa14,64□□□□□ -0,07
Cldnd1-201ENSMUST00000023426 FcgbpE9Q0B5 2583 aa14,6□□□□□ -0,07
Cldnd1-201ENSMUST00000023426 Phxr4P15974 95 aa14,58□□□□□ -0,08
Cldnd1-201ENSMUST00000023426 Krtap10-4Q08EG8 221 aa14,54□□□□□ -0,08
Cldnd1-201ENSMUST00000023426 Dnah7aE9Q0T8 4024 aa14,52□□□□□ -0,08
Cldnd1-201ENSMUST00000023426 Dnah5Q8VHE6 4621 aa14,5□□□□□ -0,09
Cldnd1-201ENSMUST00000023426 Cypt15B1AXS0 87 aa14,48□□□□□ -0,09
Cldnd1-201ENSMUST00000023426 Defb13Q8R2I4 64 aa14,45□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Gm10643Q3URG9 111 aa14,43□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Sox16Q62247 57 aa14,43□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Defb38Q7TNV7 63 aa14,42□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Hectd4E9Q2E4 4418 aa14,42□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Spaca4Q80ZQ0 127 aa14,41□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Dnah2P0C6F1 4456 aa14,4□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Krtap13O88375 197 aa14,4□□□□□ -0,1
Cldnd1-201ENSMUST00000023426 Vps13dB1ART2 4390 aa14,39□□□□□ -0,11
Cldnd1-201ENSMUST00000023426 OxtP35454 125 aa14,34□□□□□ -0,11
Cldnd1-201ENSMUST00000023426 ApobE9Q414 4505 aa14,31□□□□□ -0,12
Cldnd1-201ENSMUST00000023426 Pkd1O08852 4293 aa14,3□□□□□ -0,12
Cldnd1-201ENSMUST00000023426 Gm20661K7N787 53 aa14,29□□□□□ -0,12
Cldnd1-201ENSMUST00000023426 4933415A04RikQ9D443 101 aa14,27□□□□□ -0,12
Cldnd1-201ENSMUST00000023426 Gm21798J3QNU5 87 aa14,25□□□□□ -0,13
Cldnd1-201ENSMUST00000023426 Stard9Q80TF6 4561 aa14,15□□□□□ -0,14
Cldnd1-201ENSMUST00000023426 Ndufb1P0DN34 57 aa14,15□□□□□ -0,14
Cldnd1-201ENSMUST00000023426 Krtap10-10A0A1W2P7T6 217 aa14,13□□□□□ -0,15
Cldnd1-201ENSMUST00000023426 Lrp1bQ9JI18 4599 aa14,13□□□□□ -0,15
Cldnd1-201ENSMUST00000023426 Wfdc3Q14AE4 130 aa14,11□□□□□ -0,15
Cldnd1-201ENSMUST00000023426 Gm2696A0A1W2P709 240 aa14,11□□□□□ -0,15
Cldnd1-201ENSMUST00000023426 Limd2Q8BGB5 128 aa14,03□□□□□ -0,16
Cldnd1-201ENSMUST00000023426 Gm10999F6Q4M4 69 aa14,01□□□□□ -0,17
Cldnd1-201ENSMUST00000023426 SptssbQ925E8 76 aa14□□□□□ -0,17
Cldnd1-201ENSMUST00000023426 Uqcr11Q9CPX8 56 aa14□□□□□ -0,17
Cldnd1-201ENSMUST00000023426 Rps29P62274 56 aa13,96□□□□□ -0,17
Cldnd1-201ENSMUST00000023426 Pkhd1E9PZ36 4059 aa13,94□□□□□ -0,18
Cldnd1-201ENSMUST00000023426 Q8BGJ3 129 aa13,93□□□□□ -0,18
Cldnd1-201ENSMUST00000023426 2310034C09RikQ9D746 214 aa13,91□□□□□ -0,18
Cldnd1-201ENSMUST00000023426 Krtap3-2Q9D638 99 aa13,91□□□□□ -0,18
Cldnd1-201ENSMUST00000023426 Krtap3-3Q9D7P0 99 aa13,91□□□□□ -0,18
Cldnd1-201ENSMUST00000023426 Gm26620Q9CY65 116 aa13,88□□□□□ -0,19
Cldnd1-201ENSMUST00000023426 2310079G19RikQ9D6L6 185 aa13,84□□□□□ -0,19
Cldnd1-201ENSMUST00000023426 A930033H14RikG5E8X6 103 aa13,82□□□□□ -0,2
Cldnd1-201ENSMUST00000023426 Dync1h1Q9JHU4 4644 aaKnown RBP13,8□□□□□ -0,2
Cldnd1-201ENSMUST00000023426 Fat2Q5F226 4351 aa13,8□□□□□ -0,2
Cldnd1-201ENSMUST00000023426 Fat1A0A1L1SQU7 4645 aa13,79□□□□□ -0,2
Cldnd1-201ENSMUST00000023426 SacsQ9JLC8 4582 aa13,78□□□□□ -0,2
Cldnd1-201ENSMUST00000023426 RetnlbQ99P86 105 aa13,76□□□□□ -0,21
Cldnd1-201ENSMUST00000023426 4930507D05RikQ8C9C9 103 aa13,75□□□□□ -0,21
Cldnd1-201ENSMUST00000023426 Gm11939A2A592 99 aa13,67□□□□□ -0,22
Cldnd1-201ENSMUST00000023426 Gm3646F6S692 53 aa13,65□□□□□ -0,22
Cldnd1-201ENSMUST00000023426 Gm4491E0CX42 125 aa13,64□□□□□ -0,23
Cldnd1-201ENSMUST00000023426 Defb1P56386 69 aa13,59□□□□□ -0,23
Cldnd1-201ENSMUST00000023426 D6Ertd527eA0A0N4SWI3 464 aa13,55□□□□□ -0,24
Cldnd1-201ENSMUST00000023426 Ryr3A2AGL3 4863 aa13,41□□□□□ -0,26
Cldnd1-201ENSMUST00000023426 Pkhd1l1Q80ZA4 4249 aa13,38□□□□□ -0,27
Cldnd1-201ENSMUST00000023426 Gm5767A0A0J9YTU8 78 aa13,35□□□□□ -0,27
Cldnd1-201ENSMUST00000023426 1700042G07RikB1AUF7 90 aa13,34□□□□□ -0,27
Cldnd1-201ENSMUST00000023426 Ndufs5Q99LY9 106 aa13,34□□□□□ -0,27
Cldnd1-201ENSMUST00000023426 9230102O04RikA2ASX7 82 aa13,28□□□□□ -0,28
Cldnd1-201ENSMUST00000023426 Krtap19-5O08632 62 aa13,26□□□□□ -0,29
Cldnd1-201ENSMUST00000023426 Sec61gP60060 68 aa13,22□□□□□ -0,29
Cldnd1-201ENSMUST00000023426 Vps13bQ80TY5 3993 aa13,22□□□□□ -0,29
Cldnd1-201ENSMUST00000023426 Cox6b2Q80ZN9 88 aa13,19□□□□□ -0,3
Cldnd1-201ENSMUST00000023426 Lrp1Q91ZX7 4545 aaKnown RBP13,12□□□□□ -0,31
Cldnd1-201ENSMUST00000023426 Ryr2E9Q401 4966 aaKnown RBP13,12□□□□□ -0,31
Cldnd1-201ENSMUST00000023426 Kmt2cQ8BRH4 4903 aa13,03□□□□□ -0,32
Cldnd1-201ENSMUST00000023426 Rnase13Q5GAM7 153 aa12,99□□□□□ -0,33
Cldnd1-201ENSMUST00000023426 Pla2g10Q9QXX3 151 aa12,99□□□□□ -0,33
Cldnd1-201ENSMUST00000023426 Gm9736A0A1W2P7N1 277 aa12,97□□□□□ -0,33
Cldnd1-201ENSMUST00000023426 Rpl37Q9D823 97 aa12,97□□□□□ -0,33
Cldnd1-201ENSMUST00000023426 Fat3Q8BNA6 4555 aa12,94□□□□□ -0,34
Cldnd1-201ENSMUST00000023426 Gm5965D3Z724 196 aa12,91□□□□□ -0,34
Cldnd1-201ENSMUST00000023426 Krtap15-1Q9QZU5 150 aa12,89□□□□□ -0,35
Cldnd1-201ENSMUST00000023426 Gm20537G3UYK7 97 aa12,83□□□□□ -0,36
Cldnd1-201ENSMUST00000023426 Dnah8Q91XQ0 4731 aa12,82□□□□□ -0,36
Cldnd1-201ENSMUST00000023426 Gm17416Q30KP4 66 aa12,79□□□□□ -0,36
Cldnd1-201ENSMUST00000023426 Ryr1E9PZQ0 5035 aa12,78□□□□□ -0,36
Cldnd1-201ENSMUST00000023426 Gm17606F6ZL36 78 aa12,76□□□□□ -0,37
Cldnd1-201ENSMUST00000023426 Gm9821Q8K076 103 aa12,74□□□□□ -0,37
Cldnd1-201ENSMUST00000023426 Gm9955Q8CEJ8 102 aa12,72□□□□□ -0,37
Cldnd1-201ENSMUST00000023426 Gm10382Q3V0T5 144 aa12,64□□□□□ -0,39
Cldnd1-201ENSMUST00000023426 Mycbp2Q7TPH6 4711 aa12,63□□□□□ -0,39
Cldnd1-201ENSMUST00000023426 Abca13Q5SSE9 5034 aa12,61□□□□□ -0,39
Cldnd1-201ENSMUST00000023426 Gm3880A0A1B0GSB3 72 aa12,59□□□□□ -0,39
Cldnd1-201ENSMUST00000023426 Krtap3-1A2A591 98 aa12,53□□□□□ -0,4
Cldnd1-201ENSMUST00000023426 2210017I01RikA0A0A6YVV1 95 aa12,47□□□□□ -0,41
Cldnd1-201ENSMUST00000023426 Dnhd1D3Z2X2 4750 aa12,37□□□□□ -0,43
Retrieved 100 of 22,080 RNA–protein pairs in 53,2 ms