RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Igkv3-3A0A140T8Q0 119 aa14.85□□□□□ -0.03
Cldnd1-201ENSMUST00000023426 Gm10197F6QEY5 67 aa14.84□□□□□ -0.03
Cldnd1-201ENSMUST00000023426 Gm10337F7DEP7 55 aa14.82□□□□□ -0.04
Cldnd1-201ENSMUST00000023426 Anapc11Q9CPX9 84 aa14.8□□□□□ -0.04
Cldnd1-201ENSMUST00000023426 Chtf8P0CG14 533 aa14.79□□□□□ -0.04
Cldnd1-201ENSMUST00000023426 Krtap14O08640 167 aa14.77□□□□□ -0.04
Cldnd1-201ENSMUST00000023426 Gm10267M0QWD8 85 aa14.77□□□□□ -0.05
Cldnd1-201ENSMUST00000023426 Mrpl55Q9CZ83 127 aa14.75□□□□□ -0.05
Cldnd1-201ENSMUST00000023426 Bean1Q9EQG5 255 aa14.74□□□□□ -0.05
Cldnd1-201ENSMUST00000023426 H2al1bA0A087WP11 105 aa14.69□□□□□ -0.06
Cldnd1-201ENSMUST00000023426 H2al1kJ3QP08 105 aa14.69□□□□□ -0.06
Cldnd1-201ENSMUST00000023426 H2al1eQ810S6 105 aa14.69□□□□□ -0.06
Cldnd1-201ENSMUST00000023426 H2al1mQ9DAD9 105 aa14.69□□□□□ -0.06
Cldnd1-201ENSMUST00000023426 Gm10160F6Y577 67 aa14.66□□□□□ -0.06
Cldnd1-201ENSMUST00000023426 Dnah7cA0A087WR13 4024 aa14.64□□□□□ -0.07
Cldnd1-201ENSMUST00000023426 FcgbpE9Q0B5 2583 aa14.6□□□□□ -0.07
Cldnd1-201ENSMUST00000023426 Phxr4P15974 95 aa14.58□□□□□ -0.08
Cldnd1-201ENSMUST00000023426 Krtap10-4Q08EG8 221 aa14.54□□□□□ -0.08
Cldnd1-201ENSMUST00000023426 Dnah7aE9Q0T8 4024 aa14.52□□□□□ -0.08
Cldnd1-201ENSMUST00000023426 Dnah5Q8VHE6 4621 aa14.5□□□□□ -0.09
Cldnd1-201ENSMUST00000023426 Cypt15B1AXS0 87 aa14.48□□□□□ -0.09
Cldnd1-201ENSMUST00000023426 Defb13Q8R2I4 64 aa14.45□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Gm10643Q3URG9 111 aa14.43□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Sox16Q62247 57 aa14.43□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Defb38Q7TNV7 63 aa14.42□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Hectd4E9Q2E4 4418 aa14.42□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Spaca4Q80ZQ0 127 aa14.41□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Dnah2P0C6F1 4456 aa14.4□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Krtap13O88375 197 aa14.4□□□□□ -0.1
Cldnd1-201ENSMUST00000023426 Vps13dB1ART2 4390 aa14.39□□□□□ -0.11
Cldnd1-201ENSMUST00000023426 OxtP35454 125 aa14.34□□□□□ -0.11
Cldnd1-201ENSMUST00000023426 ApobE9Q414 4505 aa14.31□□□□□ -0.12
Cldnd1-201ENSMUST00000023426 Pkd1O08852 4293 aa14.3□□□□□ -0.12
Cldnd1-201ENSMUST00000023426 Gm20661K7N787 53 aa14.29□□□□□ -0.12
Cldnd1-201ENSMUST00000023426 4933415A04RikQ9D443 101 aa14.27□□□□□ -0.12
Cldnd1-201ENSMUST00000023426 Gm21798J3QNU5 87 aa14.25□□□□□ -0.13
Cldnd1-201ENSMUST00000023426 Stard9Q80TF6 4561 aa14.15□□□□□ -0.14
Cldnd1-201ENSMUST00000023426 Ndufb1P0DN34 57 aa14.15□□□□□ -0.14
Cldnd1-201ENSMUST00000023426 Krtap10-10A0A1W2P7T6 217 aa14.13□□□□□ -0.15
Cldnd1-201ENSMUST00000023426 Lrp1bQ9JI18 4599 aa14.13□□□□□ -0.15
Cldnd1-201ENSMUST00000023426 Wfdc3Q14AE4 130 aa14.11□□□□□ -0.15
Cldnd1-201ENSMUST00000023426 Gm2696A0A1W2P709 240 aa14.11□□□□□ -0.15
Cldnd1-201ENSMUST00000023426 Limd2Q8BGB5 128 aa14.03□□□□□ -0.16
Cldnd1-201ENSMUST00000023426 Gm10999F6Q4M4 69 aa14.01□□□□□ -0.17
Cldnd1-201ENSMUST00000023426 SptssbQ925E8 76 aa14□□□□□ -0.17
Cldnd1-201ENSMUST00000023426 Uqcr11Q9CPX8 56 aa14□□□□□ -0.17
Cldnd1-201ENSMUST00000023426 Rps29P62274 56 aa13.96□□□□□ -0.17
Cldnd1-201ENSMUST00000023426 Pkhd1E9PZ36 4059 aa13.94□□□□□ -0.18
Cldnd1-201ENSMUST00000023426 Q8BGJ3 129 aa13.93□□□□□ -0.18
Cldnd1-201ENSMUST00000023426 2310034C09RikQ9D746 214 aa13.91□□□□□ -0.18
Cldnd1-201ENSMUST00000023426 Krtap3-2Q9D638 99 aa13.91□□□□□ -0.18
Cldnd1-201ENSMUST00000023426 Krtap3-3Q9D7P0 99 aa13.91□□□□□ -0.18
Cldnd1-201ENSMUST00000023426 Gm26620Q9CY65 116 aa13.88□□□□□ -0.19
Cldnd1-201ENSMUST00000023426 2310079G19RikQ9D6L6 185 aa13.84□□□□□ -0.19
Cldnd1-201ENSMUST00000023426 A930033H14RikG5E8X6 103 aa13.82□□□□□ -0.2
Cldnd1-201ENSMUST00000023426 Dync1h1Q9JHU4 4644 aaKnown RBP13.8□□□□□ -0.2
Cldnd1-201ENSMUST00000023426 Fat2Q5F226 4351 aa13.8□□□□□ -0.2
Cldnd1-201ENSMUST00000023426 Fat1A0A1L1SQU7 4645 aa13.79□□□□□ -0.2
Cldnd1-201ENSMUST00000023426 SacsQ9JLC8 4582 aa13.78□□□□□ -0.2
Cldnd1-201ENSMUST00000023426 RetnlbQ99P86 105 aa13.76□□□□□ -0.21
Cldnd1-201ENSMUST00000023426 4930507D05RikQ8C9C9 103 aa13.75□□□□□ -0.21
Cldnd1-201ENSMUST00000023426 Gm11939A2A592 99 aa13.67□□□□□ -0.22
Cldnd1-201ENSMUST00000023426 Gm3646F6S692 53 aa13.65□□□□□ -0.22
Cldnd1-201ENSMUST00000023426 Gm4491E0CX42 125 aa13.64□□□□□ -0.23
Cldnd1-201ENSMUST00000023426 Defb1P56386 69 aa13.59□□□□□ -0.23
Cldnd1-201ENSMUST00000023426 D6Ertd527eA0A0N4SWI3 464 aa13.55□□□□□ -0.24
Cldnd1-201ENSMUST00000023426 Ryr3A2AGL3 4863 aa13.41□□□□□ -0.26
Cldnd1-201ENSMUST00000023426 Pkhd1l1Q80ZA4 4249 aa13.38□□□□□ -0.27
Cldnd1-201ENSMUST00000023426 Gm5767A0A0J9YTU8 78 aa13.35□□□□□ -0.27
Cldnd1-201ENSMUST00000023426 1700042G07RikB1AUF7 90 aa13.34□□□□□ -0.27
Cldnd1-201ENSMUST00000023426 Ndufs5Q99LY9 106 aa13.34□□□□□ -0.27
Cldnd1-201ENSMUST00000023426 9230102O04RikA2ASX7 82 aa13.28□□□□□ -0.28
Cldnd1-201ENSMUST00000023426 Krtap19-5O08632 62 aa13.26□□□□□ -0.29
Cldnd1-201ENSMUST00000023426 Sec61gP60060 68 aa13.22□□□□□ -0.29
Cldnd1-201ENSMUST00000023426 Vps13bQ80TY5 3993 aa13.22□□□□□ -0.29
Cldnd1-201ENSMUST00000023426 Cox6b2Q80ZN9 88 aa13.19□□□□□ -0.3
Cldnd1-201ENSMUST00000023426 Lrp1Q91ZX7 4545 aaKnown RBP13.12□□□□□ -0.31
Cldnd1-201ENSMUST00000023426 Ryr2E9Q401 4966 aaKnown RBP13.12□□□□□ -0.31
Cldnd1-201ENSMUST00000023426 Kmt2cQ8BRH4 4903 aa13.03□□□□□ -0.32
Cldnd1-201ENSMUST00000023426 Rnase13Q5GAM7 153 aa12.99□□□□□ -0.33
Cldnd1-201ENSMUST00000023426 Pla2g10Q9QXX3 151 aa12.99□□□□□ -0.33
Cldnd1-201ENSMUST00000023426 Gm9736A0A1W2P7N1 277 aa12.97□□□□□ -0.33
Cldnd1-201ENSMUST00000023426 Rpl37Q9D823 97 aa12.97□□□□□ -0.33
Cldnd1-201ENSMUST00000023426 Fat3Q8BNA6 4555 aa12.94□□□□□ -0.34
Cldnd1-201ENSMUST00000023426 Gm5965D3Z724 196 aa12.91□□□□□ -0.34
Cldnd1-201ENSMUST00000023426 Krtap15-1Q9QZU5 150 aa12.89□□□□□ -0.35
Cldnd1-201ENSMUST00000023426 Gm20537G3UYK7 97 aa12.83□□□□□ -0.36
Cldnd1-201ENSMUST00000023426 Dnah8Q91XQ0 4731 aa12.82□□□□□ -0.36
Cldnd1-201ENSMUST00000023426 Gm17416Q30KP4 66 aa12.79□□□□□ -0.36
Cldnd1-201ENSMUST00000023426 Ryr1E9PZQ0 5035 aa12.78□□□□□ -0.36
Cldnd1-201ENSMUST00000023426 Gm17606F6ZL36 78 aa12.76□□□□□ -0.37
Cldnd1-201ENSMUST00000023426 Gm9821Q8K076 103 aa12.74□□□□□ -0.37
Cldnd1-201ENSMUST00000023426 Gm9955Q8CEJ8 102 aa12.72□□□□□ -0.37
Cldnd1-201ENSMUST00000023426 Gm10382Q3V0T5 144 aa12.64□□□□□ -0.39
Cldnd1-201ENSMUST00000023426 Mycbp2Q7TPH6 4711 aa12.63□□□□□ -0.39
Cldnd1-201ENSMUST00000023426 Abca13Q5SSE9 5034 aa12.61□□□□□ -0.39
Cldnd1-201ENSMUST00000023426 Gm3880A0A1B0GSB3 72 aa12.59□□□□□ -0.39
Cldnd1-201ENSMUST00000023426 Krtap3-1A2A591 98 aa12.53□□□□□ -0.4
Cldnd1-201ENSMUST00000023426 2210017I01RikA0A0A6YVV1 95 aa12.47□□□□□ -0.41
Cldnd1-201ENSMUST00000023426 Dnhd1D3Z2X2 4750 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms