RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Igsf10Q3V1M1 2594 aa11.25□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Gm21798J3QNU5 87 aa11.24□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Gm36176A0A1W2P8D5 158 aa11.24□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Pla2g10Q9QXX3 151 aa11.23□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Ubr5Q80TP3 2792 aa11.23□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 NipblQ6KCD5 2798 aaKnown RBP11.23□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Gm17349F7BGH6 99 aa11.23□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Gm9508A0A1W2P7W0 230 aa11.22□□□□□ -0.61
Smarcc1-207ENSMUST00000199896 Myo15bI7HPW8 3033 aa11.2□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Itpr3P70227 2670 aa11.19□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Chd6A3KFM7 2711 aa11.19□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Gm10320E9PW43 113 aa11.17□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Bod1lE9Q6J5 3032 aa11.17□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Col12a1Q60847 3120 aa11.16□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 6030445D17RikE9Q8F9 148 aa11.15□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Gm20538F6Z9R1 75 aa11.15□□□□□ -0.62
Smarcc1-207ENSMUST00000199896 Map1aQ9QYR6 2776 aa11.15□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 Spink7Q6IE32 76 aa11.13□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 Mki67E9PVX6 3177 aaKnown RBP11.13□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 9530053A07RikE9PVG8 2581 aa11.11□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 MgaA2AWL7 3003 aaKnown RBP11.11□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 Gm4491E0CX42 125 aa11.1□□□□□ -0.63
Smarcc1-207ENSMUST00000199896 Ash1lQ99MY8 2958 aa11.07□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Tnrc18Q80WC3 2878 aa11.07□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Krtap15-1Q9QZU5 150 aa11.07□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Odf3bQ5M8M2 238 aa11.05□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 CriptO70333 101 aa11.04□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Fbn2Q61555 2907 aa11.04□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Chd7A2AJK6 2986 aaKnown RBP11.03□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Gm10643Q3URG9 111 aa11.03□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Gm10139O88245 57 aa11.02□□□□□ -0.64
Smarcc1-207ENSMUST00000199896 Dmxl1Q6PNC0 3013 aa11.02□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 HttP42859 3119 aa11.02□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Gm3880A0A1B0GSB3 72 aa11.01□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Tep1P97499 2629 aa11.01□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Nbeal2Q6ZQA0 2742 aa11.01□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Sprr1aQ62266 144 aa11.01□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Gm9955Q8CEJ8 102 aa10.99□□□□□ -0.65
Smarcc1-207ENSMUST00000199896 Pkd1l1Q8R526 2615 aa10.96□□□□□ -0.66
Smarcc1-207ENSMUST00000199896 Rev3lQ61493 3122 aa10.94□□□□□ -0.66
Smarcc1-207ENSMUST00000199896 KalrnA2CG49 2964 aa10.92□□□□□ -0.66
Smarcc1-207ENSMUST00000199896 Stab2Q8R4U0 2559 aa10.89□□□□□ -0.67
Smarcc1-207ENSMUST00000199896 Col6a5A6H584 2640 aa10.86□□□□□ -0.67
Smarcc1-207ENSMUST00000199896 Fam229aB2KGE5 128 aa10.83□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Gm16253D3Z167 63 aa10.82□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Cystm1Q8K353 104 aa10.8□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Muc2Q80Z19 2680 aa10.79□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Krtap13O88375 197 aa10.78□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Gm9507D3Z5T3 223 aa10.78□□□□□ -0.68
Smarcc1-207ENSMUST00000199896 Ranbp2Q9ERU9 3053 aaKnown RBP10.77□□□□□ -0.69
Smarcc1-207ENSMUST00000199896 A730071L15RikQ8C4X0 137 aa10.74□□□□□ -0.69
Smarcc1-207ENSMUST00000199896 Gm37013Q8K491 104 aa10.74□□□□□ -0.69
Smarcc1-207ENSMUST00000199896 Krtap29-1A2A5X4 342 aa10.74□□□□□ -0.69
Smarcc1-207ENSMUST00000199896 Sec61bQ9CQS8 96 aaKnown RBP10.73□□□□□ -0.69
Smarcc1-207ENSMUST00000199896 Hivep1Q03172 2688 aa10.7□□□□□ -0.7
Smarcc1-207ENSMUST00000199896 Cfap54Q8C6S9 3106 aa10.68□□□□□ -0.7
Smarcc1-207ENSMUST00000199896 AtmQ62388 3066 aa10.67□□□□□ -0.7
Smarcc1-207ENSMUST00000199896 2310050C09RikG5E8Z3 280 aa10.66□□□□□ -0.7
Smarcc1-207ENSMUST00000199896 Camk2n1Q6QWF9 78 aa10.66□□□□□ -0.7
Smarcc1-207ENSMUST00000199896 Gm5767A0A0J9YTU8 78 aa10.64□□□□□ -0.71
Smarcc1-207ENSMUST00000199896 Krtap10-4Q08EG8 221 aa10.64□□□□□ -0.71
Smarcc1-207ENSMUST00000199896 AspmQ8CJ27 3122 aa10.62□□□□□ -0.71
Smarcc1-207ENSMUST00000199896 Cdh23Q99PF4 3354 aa10.62□□□□□ -0.71
Smarcc1-207ENSMUST00000199896 Celsr1O35161 3034 aa10.6□□□□□ -0.71
Smarcc1-207ENSMUST00000199896 Tex15F8VPN2 2785 aa10.56□□□□□ -0.72
Smarcc1-207ENSMUST00000199896 Vps13aQ5H8C4 3166 aa10.52□□□□□ -0.72
Smarcc1-207ENSMUST00000199896 Krtap10-10A0A1W2P7T6 217 aa10.5□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 Szt2A2A9C3 3431 aa10.49□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 Itpr2Q9Z329 2701 aa10.48□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 BptfA2A654 3036 aaKnown RBP10.48□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 Gm19426M0QWC7 77 aa10.47□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 FcgbpE9Q0B5 2583 aa10.47□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 Krtap14O08640 167 aa10.47□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 2310061N02RikQ9D6S9 174 aa10.46□□□□□ -0.73
Smarcc1-207ENSMUST00000199896 BC029722A0A0N4SW31 51 aa10.44□□□□□ -0.74
Smarcc1-207ENSMUST00000199896 Frem2Q6NVD0 3160 aa10.43□□□□□ -0.74
Smarcc1-207ENSMUST00000199896 Rpl37Q9D823 97 aa10.42□□□□□ -0.74
Smarcc1-207ENSMUST00000199896 Gm3646F6S692 53 aa10.4□□□□□ -0.74
Smarcc1-207ENSMUST00000199896 Unc80Q8BLN6 3261 aa10.39□□□□□ -0.75
Smarcc1-207ENSMUST00000199896 Igfn1Q3KNY0 2849 aa10.38□□□□□ -0.75
Smarcc1-207ENSMUST00000199896 Lrrc37aB1AWG4 3215 aa10.37□□□□□ -0.75
Smarcc1-207ENSMUST00000199896 Utp20Q5XG71 2788 aaKnown RBP10.32□□□□□ -0.76
Smarcc1-207ENSMUST00000199896 FryE9Q8I9 3020 aa10.3□□□□□ -0.76
Smarcc1-207ENSMUST00000199896 Romo1P60603 79 aa10.29□□□□□ -0.76
Smarcc1-207ENSMUST00000199896 NbeaQ9EPN1 2936 aa10.23□□□□□ -0.77
Smarcc1-207ENSMUST00000199896 Gm2696A0A1W2P709 240 aa10.22□□□□□ -0.77
Smarcc1-207ENSMUST00000199896 Gm10382Q3V0T5 144 aa10.22□□□□□ -0.77
Smarcc1-207ENSMUST00000199896 Adgrg4B7ZCC9 3073 aa10.2□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Tnp2P11378 117 aa10.2□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Gm2310J3QNJ2 377 aa10.2□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Lama1P19137 3084 aa10.19□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 FrylF8VQ05 3007 aa10.18□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Wdfy4E9Q2M9 3149 aa10.18□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Celsr3Q91ZI0 3301 aa10.17□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Dmxl2Q8BPN8 3032 aa10.17□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Rps29P62274 56 aa10.17□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Tenm4Q3UHK6 2771 aa10.16□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Srrm2Q8BTI8 2703 aaKnown RBP10.15□□□□□ -0.78
Smarcc1-207ENSMUST00000199896 Zzef1Q5SSH7 2924 aa10.13□□□□□ -0.79
Smarcc1-207ENSMUST00000199896 TgO08710 2766 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms